RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 RGS1Q08116 209 aa10.8□□□□□ -0.68
RTN1-203ENST00000395090 ART3Q13508 389 aa10.8□□□□□ -0.68
RTN1-203ENST00000395090 MMEL1Q495T6 779 aa10.8□□□□□ -0.68
RTN1-203ENST00000395090 GUSBP11Q6P575 273 aa10.8□□□□□ -0.68
RTN1-203ENST00000395090 USP53Q70EK8 1073 aa10.8□□□□□ -0.68
RTN1-203ENST00000395090 IKBIPQ70UQ0 350 aa10.8□□□□□ -0.68
RTN1-203ENST00000395090 NUDT13Q86X67 352 aa10.8□□□□□ -0.68
RTN1-203ENST00000395090 C10orf67Q8IYJ2 551 aa10.8□□□□□ -0.68
RTN1-203ENST00000395090 ZCCHC7Q8N3Z6 543 aaKnown RBP10.8□□□□□ -0.68
RTN1-203ENST00000395090 Q8N9G6 341 aaPredicted RBP10.8□□□□□ -0.68
RTN1-203ENST00000395090 UTP15Q8TED0 518 aaKnown RBP10.8□□□□□ -0.68
RTN1-203ENST00000395090 RERGQ96A58 199 aaPredicted RBP10.8□□□□□ -0.68
RTN1-203ENST00000395090 TM4SF18Q96CE8 201 aa10.8□□□□□ -0.68
RTN1-203ENST00000395090 MTERF3Q96E29 417 aa10.8□□□□□ -0.68
RTN1-203ENST00000395090 CDC6Q99741 560 aa10.8□□□□□ -0.68
RTN1-203ENST00000395090 PRRX2Q99811 253 aa10.8□□□□□ -0.68
RTN1-203ENST00000395090 ATP6V1HQ9UI12 483 aa10.8□□□□□ -0.68
RTN1-203ENST00000395090 LEF1Q9UJU2 399 aaPredicted RBP10.8□□□□□ -0.68
RTN1-203ENST00000395090 CPED1A4D0V7 1026 aa10.79□□□□□ -0.68
RTN1-203ENST00000395090 URADA6NGE7 173 aa10.79□□□□□ -0.68
RTN1-203ENST00000395090 C4orf51C9J302 202 aa10.79□□□□□ -0.68
RTN1-203ENST00000395090 MRASO14807 208 aa10.79□□□□□ -0.68
RTN1-203ENST00000395090 TOX3O15405 576 aaPredicted RBP10.79□□□□□ -0.68
RTN1-203ENST00000395090 P2RX6O15547 441 aa10.79□□□□□ -0.68
RTN1-203ENST00000395090 ERI3O43414 337 aaKnown RBP10.79□□□□□ -0.68
RTN1-203ENST00000395090 HCRTR1O43613 425 aa10.79□□□□□ -0.68
RTN1-203ENST00000395090 TMPRSS11DO60235 418 aa10.79□□□□□ -0.68
RTN1-203ENST00000395090 SCN2BO60939 215 aa10.79□□□□□ -0.68
RTN1-203ENST00000395090 LRATO95237 230 aa10.79□□□□□ -0.68
RTN1-203ENST00000395090 CAPNS1P04632 268 aa10.79□□□□□ -0.68
RTN1-203ENST00000395090 CSF2RBP32927 897 aa10.79□□□□□ -0.68
RTN1-203ENST00000395090 S100A3P33764 101 aa10.79□□□□□ -0.68
RTN1-203ENST00000395090 DUSP3P51452 185 aaPredicted RBP10.79□□□□□ -0.68
RTN1-203ENST00000395090 ATXN3P54252 364 aaPredicted RBP10.79□□□□□ -0.68
RTN1-203ENST00000395090 TAS2R50P59544 299 aa10.79□□□□□ -0.68
RTN1-203ENST00000395090 MXRA7P84157 204 aa10.79□□□□□ -0.68
RTN1-203ENST00000395090 TGM3Q08188 693 aa10.79□□□□□ -0.68
RTN1-203ENST00000395090 TCF15Q12870 199 aa10.79□□□□□ -0.68
RTN1-203ENST00000395090 SLC14A1Q13336 389 aa10.79□□□□□ -0.68
RTN1-203ENST00000395090 PDE7AQ13946 482 aa10.79□□□□□ -0.68
RTN1-203ENST00000395090 CLPPQ16740 277 aaPredicted RBP10.79□□□□□ -0.68
RTN1-203ENST00000395090 UGT8Q16880 541 aa10.79□□□□□ -0.68
RTN1-203ENST00000395090 MSMPQ1L6U9 139 aa10.79□□□□□ -0.68
RTN1-203ENST00000395090 AMZ1Q400G9 498 aa10.79□□□□□ -0.68
RTN1-203ENST00000395090 TOR1AIP1Q5JTV8 583 aa10.79□□□□□ -0.68
RTN1-203ENST00000395090 PAGE3Q5JUK9 113 aa10.79□□□□□ -0.68
RTN1-203ENST00000395090 SPANXN4Q5MJ08 99 aa10.79□□□□□ -0.68
RTN1-203ENST00000395090 TMEM71Q6P5X7 295 aa10.79□□□□□ -0.68
RTN1-203ENST00000395090 TRIM40Q6P9F5 258 aa10.79□□□□□ -0.68
RTN1-203ENST00000395090 C16orf89Q6UX73 402 aa10.79□□□□□ -0.68
RTN1-203ENST00000395090 ZNF793Q6ZN11 406 aa10.79□□□□□ -0.68
RTN1-203ENST00000395090 MSANTD1Q6ZTZ1 278 aa10.79□□□□□ -0.68
RTN1-203ENST00000395090 PRSS42Q7Z5A4 293 aa10.79□□□□□ -0.68
RTN1-203ENST00000395090 KMT5CQ86Y97 462 aa10.79□□□□□ -0.68
RTN1-203ENST00000395090 PGAM4Q8N0Y7 254 aa10.79□□□□□ -0.68
RTN1-203ENST00000395090 AMER3Q8N944 861 aa10.79□□□□□ -0.68
RTN1-203ENST00000395090 ACOT4Q8N9L9 421 aa10.79□□□□□ -0.68
RTN1-203ENST00000395090 GTF2H4Q92759 462 aa10.79□□□□□ -0.68
RTN1-203ENST00000395090 ZNF764Q96H86 408 aaPredicted RBP10.79□□□□□ -0.68
RTN1-203ENST00000395090 OR52E6Q96RD3 313 aa10.79□□□□□ -0.68
RTN1-203ENST00000395090 PRPF18Q99633 342 aaKnown RBP10.79□□□□□ -0.68
RTN1-203ENST00000395090 HOPXQ9BPY8 73 aaPredicted RBP10.79□□□□□ -0.68
RTN1-203ENST00000395090 C17orf62Q9BQA9 187 aa10.79□□□□□ -0.68
RTN1-203ENST00000395090 GPATCH1Q9BRR8 931 aaKnown RBP10.79□□□□□ -0.68
RTN1-203ENST00000395090 KCNH6Q9H252 994 aa10.79□□□□□ -0.68
RTN1-203ENST00000395090 REEP4Q9H6H4 257 aa10.79□□□□□ -0.68
RTN1-203ENST00000395090 DUSP13Q9UII6 198 aa10.79□□□□□ -0.68
RTN1-203ENST00000395090 BTBD3Q9Y2F9 522 aa10.79□□□□□ -0.68
RTN1-203ENST00000395090 GPR55Q9Y2T6 319 aaPredicted RBP10.79□□□□□ -0.68
RTN1-203ENST00000395090 SLC22A7Q9Y694 548 aa10.79□□□□□ -0.68
RTN1-203ENST00000395090 RP1P56715 2156 aa10.79□□□□□ -0.68
RTN1-203ENST00000395090 UNC13CQ8NB66 2214 aa10.78□□□□□ -0.68
RTN1-203ENST00000395090 FRYLO94915 3013 aa10.78□□□□□ -0.68
RTN1-203ENST00000395090 A0A088AWK7 358 aa10.78□□□□□ -0.68
RTN1-203ENST00000395090 A0A1W2PQM1 296 aa10.78□□□□□ -0.68
RTN1-203ENST00000395090 TXNDC9O14530 226 aa10.78□□□□□ -0.68
RTN1-203ENST00000395090 CDX4O14627 284 aaPredicted RBP10.78□□□□□ -0.68
RTN1-203ENST00000395090 SCAMP2O15127 329 aaKnown RBP10.78□□□□□ -0.68
RTN1-203ENST00000395090 TBX19O60806 448 aa10.78□□□□□ -0.68
RTN1-203ENST00000395090 STATHP02808 62 aa10.78□□□□□ -0.68
RTN1-203ENST00000395090 MSL3P1P0C860 447 aa10.78□□□□□ -0.68
RTN1-203ENST00000395090 GRK6P43250 576 aa10.78□□□□□ -0.68
RTN1-203ENST00000395090 HNRNPFP52597 415 aaKnown RBP10.78□□□□□ -0.68
RTN1-203ENST00000395090 MAPK12P53778 367 aa10.78□□□□□ -0.68
RTN1-203ENST00000395090 WNT3P56703 355 aa10.78□□□□□ -0.68
RTN1-203ENST00000395090 HSD11B2P80365 405 aa10.78□□□□□ -0.68
RTN1-203ENST00000395090 C2orf80Q0P641 193 aa10.78□□□□□ -0.68
RTN1-203ENST00000395090 SLC9A5Q14940 896 aa10.78□□□□□ -0.68
RTN1-203ENST00000395090 MAPKAPK3Q16644 382 aa10.78□□□□□ -0.68
RTN1-203ENST00000395090 HKDC1Q2TB90 917 aa10.78□□□□□ -0.68
RTN1-203ENST00000395090 PRTGQ2VWP7 1150 aa10.78□□□□□ -0.68
RTN1-203ENST00000395090 TIGD2Q4W5G0 525 aa10.78□□□□□ -0.68
RTN1-203ENST00000395090 CPTPQ5TA50 214 aa10.78□□□□□ -0.68
RTN1-203ENST00000395090 YOD1Q5VVQ6 348 aaPredicted RBP10.78□□□□□ -0.68
RTN1-203ENST00000395090 PGM2L1Q6PCE3 622 aa10.78□□□□□ -0.68
RTN1-203ENST00000395090 DLEU7Q6UYE1 221 aa10.78□□□□□ -0.68
RTN1-203ENST00000395090 ZNF574Q6ZN55 896 aaPredicted RBP10.78□□□□□ -0.68
RTN1-203ENST00000395090 TMPRSS7Q7RTY8 843 aa10.78□□□□□ -0.68
RTN1-203ENST00000395090 R3HCC1LQ7Z5L2 792 aaKnown RBP10.78□□□□□ -0.68
RTN1-203ENST00000395090 DEFB107AQ8IZN7 70 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms