RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 MED28Q9H204 178 aa12.63□□□□□ -0.39
NFKB1-202ENST00000394820 CLEC4MQ9H2X3 399 aaPredicted RBP12.63□□□□□ -0.39
NFKB1-202ENST00000394820 SUV39H2Q9H5I1 410 aa12.63□□□□□ -0.39
NFKB1-202ENST00000394820 NMNAT1Q9HAN9 279 aaPredicted RBP12.63□□□□□ -0.39
NFKB1-202ENST00000394820 ZDHHC3Q9NYG2 299 aa12.63□□□□□ -0.39
NFKB1-202ENST00000394820 WNT6Q9Y6F9 365 aa12.63□□□□□ -0.39
NFKB1-202ENST00000394820 TSPAN9O75954 239 aa12.63□□□□□ -0.39
NFKB1-202ENST00000394820 WISP3O95389 354 aaPredicted RBP12.63□□□□□ -0.39
NFKB1-202ENST00000394820 CDK1P06493 297 aa12.63□□□□□ -0.39
NFKB1-202ENST00000394820 IL3P08700 152 aa12.63□□□□□ -0.39
NFKB1-202ENST00000394820 PDHA2P29803 388 aa12.63□□□□□ -0.39
NFKB1-202ENST00000394820 GPR1P46091 355 aa12.63□□□□□ -0.39
NFKB1-202ENST00000394820 CENPAP49450 140 aa12.63□□□□□ -0.39
NFKB1-202ENST00000394820 AP2S1P53680 142 aaPredicted RBP12.63□□□□□ -0.39
NFKB1-202ENST00000394820 SLC3A1Q07837 685 aa12.63□□□□□ -0.39
NFKB1-202ENST00000394820 SLC5A12Q1EHB4 618 aa12.63□□□□□ -0.39
NFKB1-202ENST00000394820 ARSIQ5FYB1 569 aa12.63□□□□□ -0.39
NFKB1-202ENST00000394820 SYT6Q5T7P8 510 aaPredicted RBP12.63□□□□□ -0.39
NFKB1-202ENST00000394820 BHLHB9Q6PI77 547 aa12.63□□□□□ -0.39
NFKB1-202ENST00000394820 PHC2Q8IXK0 858 aa12.63□□□□□ -0.39
NFKB1-202ENST00000394820 DNAJC22Q8N4W6 341 aa12.63□□□□□ -0.39
NFKB1-202ENST00000394820 TEX47Q8TBZ9 253 aa12.63□□□□□ -0.39
NFKB1-202ENST00000394820 QRSL1Q9H0R6 528 aaKnown RBP12.63□□□□□ -0.39
NFKB1-202ENST00000394820 ZNF236Q9UL36 1845 aa12.63□□□□□ -0.39
NFKB1-202ENST00000394820 IQCMA0A1B0GVH7 501 aa12.63□□□□□ -0.39
NFKB1-202ENST00000394820 OR2A25A4D2G3 310 aa12.63□□□□□ -0.39
NFKB1-202ENST00000394820 LEFTY2O00292 366 aa12.63□□□□□ -0.39
NFKB1-202ENST00000394820 GASTP01350 101 aa12.63□□□□□ -0.39
NFKB1-202ENST00000394820 IL7P13232 177 aa12.63□□□□□ -0.39
NFKB1-202ENST00000394820 DRD5P21918 477 aa12.63□□□□□ -0.39
NFKB1-202ENST00000394820 BAK1Q16611 211 aa12.63□□□□□ -0.39
NFKB1-202ENST00000394820 CCDC58Q4VC31 144 aa12.63□□□□□ -0.39
NFKB1-202ENST00000394820 FLYWCH1Q4VC44 716 aa12.63□□□□□ -0.39
NFKB1-202ENST00000394820 HSDL2Q6YN16 418 aa12.63□□□□□ -0.39
NFKB1-202ENST00000394820 SLC30A8Q8IWU4 369 aa12.63□□□□□ -0.39
NFKB1-202ENST00000394820 OR10H4Q8NGA5 316 aa12.63□□□□□ -0.39
NFKB1-202ENST00000394820 OR5D16Q8NGK9 328 aa12.63□□□□□ -0.39
NFKB1-202ENST00000394820 LRRC20Q8TCA0 184 aa12.63□□□□□ -0.39
NFKB1-202ENST00000394820 DOK1Q99704 481 aa12.63□□□□□ -0.39
NFKB1-202ENST00000394820 CWH43Q9H720 699 aa12.63□□□□□ -0.39
NFKB1-202ENST00000394820 ASAH2Q9NR71 780 aa12.63□□□□□ -0.39
NFKB1-202ENST00000394820 EIF3KQ9UBQ5 218 aaKnown RBP12.63□□□□□ -0.39
NFKB1-202ENST00000394820 FEZF1A0PJY2 475 aa12.62□□□□□ -0.39
NFKB1-202ENST00000394820 TMEM202A6NGA9 273 aa12.62□□□□□ -0.39
NFKB1-202ENST00000394820 HYAL3O43820 417 aaPredicted RBP12.62□□□□□ -0.39
NFKB1-202ENST00000394820 OR5F1O95221 314 aa12.62□□□□□ -0.39
NFKB1-202ENST00000394820 ATP1B2P14415 290 aaPredicted RBP12.62□□□□□ -0.39
NFKB1-202ENST00000394820 SSR2P43308 183 aa12.62□□□□□ -0.39
NFKB1-202ENST00000394820 CRISP1P54107 249 aa12.62□□□□□ -0.39
NFKB1-202ENST00000394820 GNG2P59768 71 aa12.62□□□□□ -0.39
NFKB1-202ENST00000394820 DSTNP60981 165 aa12.62□□□□□ -0.39
NFKB1-202ENST00000394820 GAB1Q13480 694 aa12.62□□□□□ -0.39
NFKB1-202ENST00000394820 LASP1Q14847 261 aaKnown RBP12.62□□□□□ -0.39
NFKB1-202ENST00000394820 MPPE1Q53F39 396 aa12.62□□□□□ -0.39
NFKB1-202ENST00000394820 CHMP1BQ7LBR1 199 aa12.62□□□□□ -0.39
NFKB1-202ENST00000394820 GALNT7Q86SF2 657 aa12.62□□□□□ -0.39
NFKB1-202ENST00000394820 TP53I13Q8NBR0 393 aaPredicted RBP12.62□□□□□ -0.39
NFKB1-202ENST00000394820 KCT2Q8NC54 265 aa12.62□□□□□ -0.39
NFKB1-202ENST00000394820 OR5H6Q8NGV6 325 aa12.62□□□□□ -0.39
NFKB1-202ENST00000394820 WDR48Q8TAF3 677 aa12.62□□□□□ -0.39
NFKB1-202ENST00000394820 HMGB4Q8WW32 186 aa12.62□□□□□ -0.39
NFKB1-202ENST00000394820 DUSP21Q9H596 190 aa12.62□□□□□ -0.39
NFKB1-202ENST00000394820 CCDC177Q9NQR7 707 aaPredicted RBP12.62□□□□□ -0.39
NFKB1-202ENST00000394820 IMP3Q9NV31 184 aaKnown RBP12.62□□□□□ -0.39
NFKB1-202ENST00000394820 CMAHPQ9Y471 501 aa12.62□□□□□ -0.39
NFKB1-202ENST00000394820 FAM183AA6NL82 134 aa12.62□□□□□ -0.39
NFKB1-202ENST00000394820 WASHC1A8K0Z3 465 aa12.62□□□□□ -0.39
NFKB1-202ENST00000394820 HLA-FP30511 346 aa12.62□□□□□ -0.39
NFKB1-202ENST00000394820 MTA1Q13330 715 aa12.62□□□□□ -0.39
NFKB1-202ENST00000394820 ALG1LQ6GMV1 187 aa12.62□□□□□ -0.39
NFKB1-202ENST00000394820 CAPN13Q6MZZ7 669 aaPredicted RBP12.62□□□□□ -0.39
NFKB1-202ENST00000394820 WASH2PQ6VEQ5 465 aa12.62□□□□□ -0.39
NFKB1-202ENST00000394820 KCTD7Q96MP8 289 aa12.62□□□□□ -0.39
NFKB1-202ENST00000394820 SLC29A3Q9BZD2 475 aa12.62□□□□□ -0.39
NFKB1-202ENST00000394820 PPIL3Q9H2H8 161 aaKnown RBP12.62□□□□□ -0.39
NFKB1-202ENST00000394820 ZFR2Q9UPR6 939 aaKnown RBP12.62□□□□□ -0.39
NFKB1-202ENST00000394820 TMEM98Q9Y2Y6 226 aa12.62□□□□□ -0.39
NFKB1-202ENST00000394820 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.61□□□□□ -0.39
NFKB1-202ENST00000394820 A8MUA0 341 aa12.61□□□□□ -0.39
NFKB1-202ENST00000394820 NRG2O14511 850 aaPredicted RBP12.61□□□□□ -0.39
NFKB1-202ENST00000394820 OR1F1O43749 312 aa12.61□□□□□ -0.39
NFKB1-202ENST00000394820 PTTG1O95997 202 aa12.61□□□□□ -0.39
NFKB1-202ENST00000394820 SRCP12931 536 aa12.61□□□□□ -0.39
NFKB1-202ENST00000394820 AMD1P17707 334 aa12.61□□□□□ -0.39
NFKB1-202ENST00000394820 ALAS2P22557 587 aa12.61□□□□□ -0.39
NFKB1-202ENST00000394820 SMSP52788 366 aa12.61□□□□□ -0.39
NFKB1-202ENST00000394820 FGFBP1Q14512 234 aa12.61□□□□□ -0.39
NFKB1-202ENST00000394820 GBX1Q14549 363 aa12.61□□□□□ -0.39
NFKB1-202ENST00000394820 ARHGEF6Q15052 776 aa12.61□□□□□ -0.39
NFKB1-202ENST00000394820 TEAD4Q15561 434 aa12.61□□□□□ -0.39
NFKB1-202ENST00000394820 C8orf82Q6P1X6 216 aaPredicted RBP12.61□□□□□ -0.39
NFKB1-202ENST00000394820 C11orf88Q6PI97 169 aa12.61□□□□□ -0.39
NFKB1-202ENST00000394820 TMEM150AQ86TG1 271 aa12.61□□□□□ -0.39
NFKB1-202ENST00000394820 C10orf53Q8N6V4 93 aa12.61□□□□□ -0.39
NFKB1-202ENST00000394820 SLC43A3Q8NBI5 491 aa12.61□□□□□ -0.39
NFKB1-202ENST00000394820 KREMEN2Q8NCW0 462 aa12.61□□□□□ -0.39
NFKB1-202ENST00000394820 DEDD2Q8WXF8 326 aa12.61□□□□□ -0.39
NFKB1-202ENST00000394820 JPH3Q8WXH2 748 aaPredicted RBP12.61□□□□□ -0.39
NFKB1-202ENST00000394820 HTATIP2Q9BUP3 242 aa12.61□□□□□ -0.39
NFKB1-202ENST00000394820 SLC46A2Q9BY10 475 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms