RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 MAGEA5P43359 124 aa16.16■□□□□ 0.18
SNRPA1-202ENST00000394082 ZFP36L2P47974 494 aaKnown RBP16.16■□□□□ 0.18
SNRPA1-202ENST00000394082 SLC22A10Q63ZE4 541 aa16.16■□□□□ 0.18
SNRPA1-202ENST00000394082 MED27Q6P2C8 311 aa16.16■□□□□ 0.18
SNRPA1-202ENST00000394082 PAQR8Q8TEZ7 354 aa16.16■□□□□ 0.18
SNRPA1-202ENST00000394082 TANKQ92844 425 aa16.16■□□□□ 0.18
SNRPA1-202ENST00000394082 SENP5Q96HI0 755 aaPredicted RBP16.16■□□□□ 0.18
SNRPA1-202ENST00000394082 TRIM31Q9BZY9 425 aa16.16■□□□□ 0.18
SNRPA1-202ENST00000394082 PHACTR1Q9C0D0 580 aa16.16■□□□□ 0.18
SNRPA1-202ENST00000394082 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.16■□□□□ 0.18
SNRPA1-202ENST00000394082 QPCTLQ9NXS2 382 aa16.16■□□□□ 0.18
SNRPA1-202ENST00000394082 WHRNQ9P202 907 aa16.16■□□□□ 0.18
SNRPA1-202ENST00000394082 RNF112Q9ULX5 631 aa16.16■□□□□ 0.18
SNRPA1-202ENST00000394082 FAM215AQ9Y5M1 114 aa16.16■□□□□ 0.18
SNRPA1-202ENST00000394082 SPG11Q96JI7 2443 aa16.16■□□□□ 0.18
SNRPA1-202ENST00000394082 TCRBV9S1A1TA0A576 114 aa16.15■□□□□ 0.18
SNRPA1-202ENST00000394082 CXorf49A8MYA2 514 aaPredicted RBP16.15■□□□□ 0.18
SNRPA1-202ENST00000394082 CCNT2O60583 730 aaKnown RBP16.15■□□□□ 0.18
SNRPA1-202ENST00000394082 C1QAP02745 245 aa16.15■□□□□ 0.18
SNRPA1-202ENST00000394082 GLI4P10075 376 aa16.15■□□□□ 0.18
SNRPA1-202ENST00000394082 CCL3P10147 92 aa16.15■□□□□ 0.18
SNRPA1-202ENST00000394082 SSTR1P30872 391 aa16.15■□□□□ 0.18
SNRPA1-202ENST00000394082 PEX19P40855 299 aa16.15■□□□□ 0.18
SNRPA1-202ENST00000394082 PIK3CBP42338 1070 aa16.15■□□□□ 0.18
SNRPA1-202ENST00000394082 SLC25A35Q3KQZ1 300 aa16.15■□□□□ 0.18
SNRPA1-202ENST00000394082 FBXO48Q5FWF7 155 aa16.15■□□□□ 0.18
SNRPA1-202ENST00000394082 WLSQ5T9L3 541 aa16.15■□□□□ 0.18
SNRPA1-202ENST00000394082 DEPDC1Q5TB30 811 aa16.15■□□□□ 0.18
SNRPA1-202ENST00000394082 KHDRBS2Q5VWX1 349 aaKnown RBP16.15■□□□□ 0.18
SNRPA1-202ENST00000394082 RTL6Q6ICC9 239 aa16.15■□□□□ 0.18
SNRPA1-202ENST00000394082 ISCA2Q86U28 154 aa16.15■□□□□ 0.18
SNRPA1-202ENST00000394082 ZCCHC7Q8N3Z6 543 aaKnown RBP16.15■□□□□ 0.18
SNRPA1-202ENST00000394082 OR7G3Q8NG95 312 aa16.15■□□□□ 0.18
SNRPA1-202ENST00000394082 SLC22A8Q8TCC7 542 aa16.15■□□□□ 0.18
SNRPA1-202ENST00000394082 UBTD2Q8WUN7 234 aa16.15■□□□□ 0.18
SNRPA1-202ENST00000394082 RBM18Q96H35 190 aaKnown RBP16.15■□□□□ 0.18
SNRPA1-202ENST00000394082 FBXL20Q96IG2 436 aa16.15■□□□□ 0.18
SNRPA1-202ENST00000394082 DGAT2Q96PD7 388 aa16.15■□□□□ 0.18
SNRPA1-202ENST00000394082 NAPGQ99747 312 aaPredicted RBP16.15■□□□□ 0.18
SNRPA1-202ENST00000394082 PELOQ9BRX2 385 aaKnown RBP16.15■□□□□ 0.18
SNRPA1-202ENST00000394082 ACKR4Q9NPB9 350 aa16.15■□□□□ 0.18
SNRPA1-202ENST00000394082 NUDT4Q9NZJ9 180 aa16.15■□□□□ 0.18
SNRPA1-202ENST00000394082 SNX24Q9Y343 169 aa16.15■□□□□ 0.18
SNRPA1-202ENST00000394082 MTORP42345 2549 aa16.14■□□□□ 0.17
SNRPA1-202ENST00000394082 K7EPI3 171 aa16.14■□□□□ 0.17
SNRPA1-202ENST00000394082 FGF17O60258 216 aa16.14■□□□□ 0.17
SNRPA1-202ENST00000394082 PIAS1O75925 651 aa16.14■□□□□ 0.17
SNRPA1-202ENST00000394082 CPN2P22792 545 aa16.14■□□□□ 0.17
SNRPA1-202ENST00000394082 SPRP35270 261 aaPredicted RBP16.14■□□□□ 0.17
SNRPA1-202ENST00000394082 SSR2P43308 183 aa16.14■□□□□ 0.17
SNRPA1-202ENST00000394082 MAN2A2P49641 1150 aa16.14■□□□□ 0.17
SNRPA1-202ENST00000394082 PLIN5Q00G26 463 aa16.14■□□□□ 0.17
SNRPA1-202ENST00000394082 CALCOCO2Q13137 446 aa16.14■□□□□ 0.17
SNRPA1-202ENST00000394082 KRTAP21-3Q3LHN1 58 aa16.14■□□□□ 0.17
SNRPA1-202ENST00000394082 GRTP1Q5TC63 336 aa16.14■□□□□ 0.17
SNRPA1-202ENST00000394082 OR4C11Q6IEV9 310 aa16.14■□□□□ 0.17
SNRPA1-202ENST00000394082 ZNF585AQ6P3V2 769 aa16.14■□□□□ 0.17
SNRPA1-202ENST00000394082 ADGRD1Q6QNK2 874 aa16.14■□□□□ 0.17
SNRPA1-202ENST00000394082 LYPD8Q6UX82 237 aa16.14■□□□□ 0.17
SNRPA1-202ENST00000394082 C3orf62Q6ZUJ4 267 aa16.14■□□□□ 0.17
SNRPA1-202ENST00000394082 CCDC91Q7Z6B0 441 aa16.14■□□□□ 0.17
SNRPA1-202ENST00000394082 OR5M9Q8NGP3 310 aa16.14■□□□□ 0.17
SNRPA1-202ENST00000394082 ATOH8Q96SQ7 321 aa16.14■□□□□ 0.17
SNRPA1-202ENST00000394082 KRT12Q99456 494 aa16.14■□□□□ 0.17
SNRPA1-202ENST00000394082 CENPKQ9BS16 269 aa16.14■□□□□ 0.17
SNRPA1-202ENST00000394082 ERP44Q9BS26 406 aa16.14■□□□□ 0.17
SNRPA1-202ENST00000394082 RPF2Q9H7B2 306 aaKnown RBP16.14■□□□□ 0.17
SNRPA1-202ENST00000394082 NMRAL1Q9HBL8 299 aa16.14■□□□□ 0.17
SNRPA1-202ENST00000394082 IGSF5Q9NSI5 407 aa16.14■□□□□ 0.17
SNRPA1-202ENST00000394082 TUBA8Q9NY65 449 aaPredicted RBP16.14■□□□□ 0.17
SNRPA1-202ENST00000394082 CNIH4Q9P003 139 aa16.14■□□□□ 0.17
SNRPA1-202ENST00000394082 PHF11Q9UIL8 331 aa16.14■□□□□ 0.17
SNRPA1-202ENST00000394082 ACAD8Q9UKU7 415 aa16.14■□□□□ 0.17
SNRPA1-202ENST00000394082 LIPGQ9Y5X9 500 aa16.14■□□□□ 0.17
SNRPA1-202ENST00000394082 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.14■□□□□ 0.17
SNRPA1-202ENST00000394082 EML6Q6ZMW3 1958 aa16.13■□□□□ 0.17
SNRPA1-202ENST00000394082 TRGV5A0A0B4J1U4 118 aa16.13■□□□□ 0.17
SNRPA1-202ENST00000394082 A0A0G2JNJ9 132 aa16.13■□□□□ 0.17
SNRPA1-202ENST00000394082 FAM221AA4D161 298 aa16.13■□□□□ 0.17
SNRPA1-202ENST00000394082 FAM187AA6NFU0 413 aa16.13■□□□□ 0.17
SNRPA1-202ENST00000394082 G3V3Y1 287 aa16.13■□□□□ 0.17
SNRPA1-202ENST00000394082 RTCAO00442 366 aaKnown RBP16.13■□□□□ 0.17
SNRPA1-202ENST00000394082 KERAO60938 352 aa16.13■□□□□ 0.17
SNRPA1-202ENST00000394082 NADKO95544 446 aaPredicted RBP16.13■□□□□ 0.17
SNRPA1-202ENST00000394082 TGFB1P01137 390 aa16.13■□□□□ 0.17
SNRPA1-202ENST00000394082 TLX1P31314 330 aaPredicted RBP16.13■□□□□ 0.17
SNRPA1-202ENST00000394082 GALNSP34059 522 aa16.13■□□□□ 0.17
SNRPA1-202ENST00000394082 DNASE1L1P49184 302 aa16.13■□□□□ 0.17
SNRPA1-202ENST00000394082 GNG11P61952 73 aa16.13■□□□□ 0.17
SNRPA1-202ENST00000394082 ASPHQ12797 758 aa16.13■□□□□ 0.17
SNRPA1-202ENST00000394082 SLAMF1Q13291 335 aa16.13■□□□□ 0.17
SNRPA1-202ENST00000394082 SPRED3Q2MJR0 410 aa16.13■□□□□ 0.17
SNRPA1-202ENST00000394082 C1orf185Q5T7R7 199 aa16.13■□□□□ 0.17
SNRPA1-202ENST00000394082 RIPPLY2Q5TAB7 128 aa16.13■□□□□ 0.17
SNRPA1-202ENST00000394082 GRHL2Q6ISB3 625 aa16.13■□□□□ 0.17
SNRPA1-202ENST00000394082 GPR180Q86V85 440 aa16.13■□□□□ 0.17
SNRPA1-202ENST00000394082 C9orf40Q8IXQ3 194 aa16.13■□□□□ 0.17
SNRPA1-202ENST00000394082 ST13P4Q8IZP2 240 aaPredicted RBP16.13■□□□□ 0.17
SNRPA1-202ENST00000394082 LRRC25Q8N386 305 aaPredicted RBP16.13■□□□□ 0.17
SNRPA1-202ENST00000394082 OR10Q1Q8NGQ4 319 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms