RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 NUBPLQ8TB37 319 aa14.15□□□□□ -0.14
CHMP3-202ENST00000393773 RNASE6Q93091 150 aaKnown RBP14.15□□□□□ -0.14
CHMP3-202ENST00000393773 KIAA1191Q96A73 305 aa14.15□□□□□ -0.14
CHMP3-202ENST00000393773 ANKRD9Q96BM1 317 aaPredicted RBP14.15□□□□□ -0.14
CHMP3-202ENST00000393773 SPACA9Q96E40 222 aaPredicted RBP14.15□□□□□ -0.14
CHMP3-202ENST00000393773 WDR34Q96EX3 536 aa14.15□□□□□ -0.14
CHMP3-202ENST00000393773 CAPZA3Q96KX2 299 aa14.15□□□□□ -0.14
CHMP3-202ENST00000393773 RUNDC3BQ96NL0 473 aa14.15□□□□□ -0.14
CHMP3-202ENST00000393773 KCNC2Q96PR1 638 aa14.15□□□□□ -0.14
CHMP3-202ENST00000393773 F2RL3Q96RI0 385 aa14.15□□□□□ -0.14
CHMP3-202ENST00000393773 ZFP64Q9NPA5 681 aa14.15□□□□□ -0.14
CHMP3-202ENST00000393773 QPCTLQ9NXS2 382 aa14.15□□□□□ -0.14
CHMP3-202ENST00000393773 ALKBH4Q9NXW9 302 aa14.15□□□□□ -0.14
CHMP3-202ENST00000393773 COPS7AQ9UBW8 275 aa14.15□□□□□ -0.14
CHMP3-202ENST00000393773 BOKQ9UMX3 212 aaPredicted RBP14.15□□□□□ -0.14
CHMP3-202ENST00000393773 CHCHD2Q9Y6H1 151 aaPredicted RBP14.15□□□□□ -0.14
CHMP3-202ENST00000393773 FAM95CA0A1B0GW59 222 aa14.14□□□□□ -0.15
CHMP3-202ENST00000393773 NCF1BA6NI72 391 aaPredicted RBP14.14□□□□□ -0.15
CHMP3-202ENST00000393773 NCF1CA8MVU1 366 aaPredicted RBP14.14□□□□□ -0.15
CHMP3-202ENST00000393773 GOLGA6L6A8MZA4 724 aa14.14□□□□□ -0.15
CHMP3-202ENST00000393773 FGF17O60258 216 aa14.14□□□□□ -0.15
CHMP3-202ENST00000393773 SCELO95171 688 aa14.14□□□□□ -0.15
CHMP3-202ENST00000393773 WISP3O95389 354 aaPredicted RBP14.14□□□□□ -0.15
CHMP3-202ENST00000393773 RAF1P04049 648 aa14.14□□□□□ -0.15
CHMP3-202ENST00000393773 NCF1P14598 390 aaPredicted RBP14.14□□□□□ -0.15
CHMP3-202ENST00000393773 TACR1P25103 407 aa14.14□□□□□ -0.15
CHMP3-202ENST00000393773 CEACAM8P31997 349 aaPredicted RBP14.14□□□□□ -0.15
CHMP3-202ENST00000393773 DGKQP52824 942 aa14.14□□□□□ -0.15
CHMP3-202ENST00000393773 TAS2R39P59534 338 aa14.14□□□□□ -0.15
CHMP3-202ENST00000393773 KCNJ2P63252 427 aa14.14□□□□□ -0.15
CHMP3-202ENST00000393773 FRG1Q14331 258 aaKnown RBP14.14□□□□□ -0.15
CHMP3-202ENST00000393773 DAZAP2Q15038 168 aaPredicted RBP14.14□□□□□ -0.15
CHMP3-202ENST00000393773 PPP1R7Q15435 360 aa14.14□□□□□ -0.15
CHMP3-202ENST00000393773 TGFBIQ15582 683 aa14.14□□□□□ -0.15
CHMP3-202ENST00000393773 DGAT2L6Q6ZPD8 337 aa14.14□□□□□ -0.15
CHMP3-202ENST00000393773 KRTAP1-3Q8IUG1 177 aa14.14□□□□□ -0.15
CHMP3-202ENST00000393773 TNIP2Q8NFZ5 429 aa14.14□□□□□ -0.15
CHMP3-202ENST00000393773 GOT1L1Q8NHS2 421 aaPredicted RBP14.14□□□□□ -0.15
CHMP3-202ENST00000393773 SLC22A8Q8TCC7 542 aa14.14□□□□□ -0.15
CHMP3-202ENST00000393773 PTCD3Q96EY7 689 aaKnown RBP14.14□□□□□ -0.15
CHMP3-202ENST00000393773 NAP1L3Q99457 506 aaPredicted RBP14.14□□□□□ -0.15
CHMP3-202ENST00000393773 MCMBPQ9BTE3 642 aa14.14□□□□□ -0.15
CHMP3-202ENST00000393773 MS4A8Q9BY19 250 aa14.14□□□□□ -0.15
CHMP3-202ENST00000393773 ACKR4Q9NPB9 350 aa14.14□□□□□ -0.15
CHMP3-202ENST00000393773 DNAJC11Q9NVH1 559 aa14.14□□□□□ -0.15
CHMP3-202ENST00000393773 CTNNAL1Q9UBT7 734 aa14.14□□□□□ -0.15
CHMP3-202ENST00000393773 ASIC3Q9UHC3 531 aa14.14□□□□□ -0.15
CHMP3-202ENST00000393773 TEX264Q9Y6I9 313 aa14.14□□□□□ -0.15
CHMP3-202ENST00000393773 MED12Q93074 2177 aa14.13□□□□□ -0.15
CHMP3-202ENST00000393773 HRKO00198 91 aa14.13□□□□□ -0.15
CHMP3-202ENST00000393773 RTCAO00442 366 aaKnown RBP14.13□□□□□ -0.15
CHMP3-202ENST00000393773 DVL2O14641 736 aa14.13□□□□□ -0.15
CHMP3-202ENST00000393773 TAPBPO15533 448 aa14.13□□□□□ -0.15
CHMP3-202ENST00000393773 LRATO95237 230 aa14.13□□□□□ -0.15
CHMP3-202ENST00000393773 FBXO45P0C2W1 286 aa14.13□□□□□ -0.15
CHMP3-202ENST00000393773 EPORP19235 508 aa14.13□□□□□ -0.15
CHMP3-202ENST00000393773 TNNI3P19429 210 aa14.13□□□□□ -0.15
CHMP3-202ENST00000393773 ATP5A1P25705 553 aaKnown RBP14.13□□□□□ -0.15
CHMP3-202ENST00000393773 IVDP26440 423 aa14.13□□□□□ -0.15
CHMP3-202ENST00000393773 GGT5P36269 586 aa14.13□□□□□ -0.15
CHMP3-202ENST00000393773 STT3AP46977 705 aa14.13□□□□□ -0.15
CHMP3-202ENST00000393773 CRYZQ08257 329 aaKnown RBP14.13□□□□□ -0.15
CHMP3-202ENST00000393773 DOC2AQ14183 400 aa14.13□□□□□ -0.15
CHMP3-202ENST00000393773 DEFB113Q30KQ7 82 aa14.13□□□□□ -0.15
CHMP3-202ENST00000393773 FBXO48Q5FWF7 155 aa14.13□□□□□ -0.15
CHMP3-202ENST00000393773 SLC22A10Q63ZE4 541 aa14.13□□□□□ -0.15
CHMP3-202ENST00000393773 BIVMQ86UB2 503 aa14.13□□□□□ -0.15
CHMP3-202ENST00000393773 ACOT4Q8N9L9 421 aa14.13□□□□□ -0.15
CHMP3-202ENST00000393773 OR10G3Q8NGC4 313 aa14.13□□□□□ -0.15
CHMP3-202ENST00000393773 ACTRT1Q8TDG2 376 aa14.13□□□□□ -0.15
CHMP3-202ENST00000393773 SMR3AQ99954 134 aa14.13□□□□□ -0.15
CHMP3-202ENST00000393773 CNOT11Q9UKZ1 510 aaKnown RBP14.13□□□□□ -0.15
CHMP3-202ENST00000393773 EDARQ9UNE0 448 aa14.13□□□□□ -0.15
CHMP3-202ENST00000393773 JRKLQ9Y4A0 524 aa14.13□□□□□ -0.15
CHMP3-202ENST00000393773 JMJD1CQ15652 2540 aa14.12□□□□□ -0.15
CHMP3-202ENST00000393773 COX7A2P14406 83 aa14.12□□□□□ -0.15
CHMP3-202ENST00000393773 HIST1H1TP22492 207 aaPredicted RBP14.12□□□□□ -0.15
CHMP3-202ENST00000393773 TRPC1P48995 793 aa14.12□□□□□ -0.15
CHMP3-202ENST00000393773 ZNF136P52737 540 aa14.12□□□□□ -0.15
CHMP3-202ENST00000393773 LTBQ06643 244 aa14.12□□□□□ -0.15
CHMP3-202ENST00000393773 TGM3Q08188 693 aa14.12□□□□□ -0.15
CHMP3-202ENST00000393773 TBL3Q12788 808 aaKnown RBP14.12□□□□□ -0.15
CHMP3-202ENST00000393773 E2F2Q14209 437 aa14.12□□□□□ -0.15
CHMP3-202ENST00000393773 PDK4Q16654 411 aa14.12□□□□□ -0.15
CHMP3-202ENST00000393773 LACC1Q8IV20 430 aa14.12□□□□□ -0.15
CHMP3-202ENST00000393773 TCAIMQ8N3R3 496 aa14.12□□□□□ -0.15
CHMP3-202ENST00000393773 SLC15A4Q8N697 577 aa14.12□□□□□ -0.15
CHMP3-202ENST00000393773 BBOF1Q8ND07 529 aa14.12□□□□□ -0.15
CHMP3-202ENST00000393773 SENP5Q96HI0 755 aaPredicted RBP14.12□□□□□ -0.15
CHMP3-202ENST00000393773 FBXL20Q96IG2 436 aa14.12□□□□□ -0.15
CHMP3-202ENST00000393773 TBCDQ9BTW9 1192 aa14.12□□□□□ -0.15
CHMP3-202ENST00000393773 EFCAB11Q9BUY7 163 aa14.12□□□□□ -0.15
CHMP3-202ENST00000393773 CAPS2Q9BXY5 557 aa14.12□□□□□ -0.15
CHMP3-202ENST00000393773 ROGDIQ9GZN7 287 aa14.12□□□□□ -0.15
CHMP3-202ENST00000393773 DERL2Q9GZP9 239 aa14.12□□□□□ -0.15
CHMP3-202ENST00000393773 POPDC3Q9HBV1 291 aa14.12□□□□□ -0.15
CHMP3-202ENST00000393773 WWOXQ9NZC7 414 aa14.12□□□□□ -0.15
CHMP3-202ENST00000393773 TLN2Q9Y4G6 2542 aa14.12□□□□□ -0.15
CHMP3-202ENST00000393773 MED12LQ86YW9 2145 aa14.12□□□□□ -0.15
CHMP3-202ENST00000393773 GOLGA6L10A0A0M3HER8 536 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms