RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 TMEM80Q96HE8 168 aa17.91■□□□□ 0.46
CBX1-202ENST00000393408 AGAP4Q96P64 663 aa17.91■□□□□ 0.46
CBX1-202ENST00000393408 IL17FQ96PD4 163 aa17.91■□□□□ 0.46
CBX1-202ENST00000393408 ZCCHC2Q9C0B9 1178 aaKnown RBP17.91■□□□□ 0.46
CBX1-202ENST00000393408 EXOSC4Q9NPD3 245 aaKnown RBP17.91■□□□□ 0.46
CBX1-202ENST00000393408 PLPP1O14494 284 aa17.91■□□□□ 0.46
CBX1-202ENST00000393408 PI15O43692 258 aa17.91■□□□□ 0.46
CBX1-202ENST00000393408 MOSPD3O75425 235 aa17.91■□□□□ 0.46
CBX1-202ENST00000393408 FGF18O76093 207 aa17.91■□□□□ 0.46
CBX1-202ENST00000393408 SLITRK5O94991 958 aa17.91■□□□□ 0.46
CBX1-202ENST00000393408 TBX6O95947 436 aaPredicted RBP17.91■□□□□ 0.46
CBX1-202ENST00000393408 NR4A2P43354 598 aa17.91■□□□□ 0.46
CBX1-202ENST00000393408 TLE2Q04725 743 aa17.91■□□□□ 0.46
CBX1-202ENST00000393408 NCF4Q15080 339 aa17.91■□□□□ 0.46
CBX1-202ENST00000393408 DCST1Q5T197 706 aa17.91■□□□□ 0.46
CBX1-202ENST00000393408 TMC5Q6UXY8 1006 aa17.91■□□□□ 0.46
CBX1-202ENST00000393408 GDPGP1Q6ZNW5 385 aa17.91■□□□□ 0.46
CBX1-202ENST00000393408 FAM129CQ86XR2 697 aa17.91■□□□□ 0.46
CBX1-202ENST00000393408 ZNF547Q8IVP9 402 aa17.91■□□□□ 0.46
CBX1-202ENST00000393408 SLC34A3Q8N130 599 aa17.91■□□□□ 0.46
CBX1-202ENST00000393408 ST13P5Q8NFI4 369 aaPredicted RBP17.91■□□□□ 0.46
CBX1-202ENST00000393408 PPP1R16AQ96I34 528 aa17.91■□□□□ 0.46
CBX1-202ENST00000393408 SLC6A18Q96N87 628 aa17.91■□□□□ 0.46
CBX1-202ENST00000393408 ZNF717Q9BY31 904 aaPredicted RBP17.91■□□□□ 0.46
CBX1-202ENST00000393408 ZDHHC5Q9C0B5 715 aa17.91■□□□□ 0.46
CBX1-202ENST00000393408 RACGAP1Q9H0H5 632 aa17.91■□□□□ 0.46
CBX1-202ENST00000393408 MOV10Q9HCE1 1003 aaKnown RBP17.91■□□□□ 0.46
CBX1-202ENST00000393408 ANKDD1BA6NHY2 528 aa17.9■□□□□ 0.46
CBX1-202ENST00000393408 FAAHO00519 579 aa17.9■□□□□ 0.46
CBX1-202ENST00000393408 WEE1P30291 646 aa17.9■□□□□ 0.46
CBX1-202ENST00000393408 BMPR1AP36894 532 aa17.9■□□□□ 0.46
CBX1-202ENST00000393408 SF3B4Q15427 424 aaKnown RBP eCLIP17.9■□□□□ 0.464e-8■■■■■ 38.9
CBX1-202ENST00000393408 SPHARQ15513 63 aa17.9■□□□□ 0.46
CBX1-202ENST00000393408 VANGL1Q8TAA9 524 aaPredicted RBP17.9■□□□□ 0.46
CBX1-202ENST00000393408 OR2A14Q96R47 310 aa17.9■□□□□ 0.46
CBX1-202ENST00000393408 CFHR5Q9BXR6 569 aa17.9■□□□□ 0.46
CBX1-202ENST00000393408 ABCG4Q9H172 646 aa17.9■□□□□ 0.46
CBX1-202ENST00000393408 SEC14L4Q9UDX3 406 aa17.9■□□□□ 0.46
CBX1-202ENST00000393408 WNT6Q9Y6F9 365 aa17.9■□□□□ 0.46
CBX1-202ENST00000393408 OR10H3O60404 316 aa17.9■□□□□ 0.46
CBX1-202ENST00000393408 MYCP01106 439 aaPredicted RBP17.9■□□□□ 0.46
CBX1-202ENST00000393408 RB1P06400 928 aa17.9■□□□□ 0.46
CBX1-202ENST00000393408 H1F0P07305 194 aaKnown RBP17.9■□□□□ 0.46
CBX1-202ENST00000393408 RCVRNP35243 200 aa17.9■□□□□ 0.46
CBX1-202ENST00000393408 CRYBB2P43320 205 aa17.9■□□□□ 0.46
CBX1-202ENST00000393408 XKP51811 444 aa17.9■□□□□ 0.46
CBX1-202ENST00000393408 METAP1P53582 386 aa17.9■□□□□ 0.46
CBX1-202ENST00000393408 IFITM2Q01629 132 aa17.9■□□□□ 0.46
CBX1-202ENST00000393408 ZNF91Q05481 1191 aa17.9■□□□□ 0.46
CBX1-202ENST00000393408 LRRC26Q2I0M4 334 aa17.9■□□□□ 0.46
CBX1-202ENST00000393408 PGBD2Q6P3X8 592 aa17.9■□□□□ 0.46
CBX1-202ENST00000393408 LCTLQ6UWM7 567 aa17.9■□□□□ 0.46
CBX1-202ENST00000393408 RBM45Q8IUH3 476 aaKnown RBP17.9■□□□□ 0.46
CBX1-202ENST00000393408 KRT78Q8N1N4 520 aa17.9■□□□□ 0.46
CBX1-202ENST00000393408 OR4D11Q8NGI4 311 aa17.9■□□□□ 0.46
CBX1-202ENST00000393408 RAB8BQ92930 207 aa17.9■□□□□ 0.46
CBX1-202ENST00000393408 TM4SF18Q96CE8 201 aa17.9■□□□□ 0.46
CBX1-202ENST00000393408 TRMT61AQ96FX7 289 aaKnown RBP17.9■□□□□ 0.46
CBX1-202ENST00000393408 ZNF486Q96H40 463 aaPredicted RBP17.9■□□□□ 0.46
CBX1-202ENST00000393408 SAGE1Q9NXZ1 904 aa17.9■□□□□ 0.46
CBX1-202ENST00000393408 AHSPQ9NZD4 102 aa17.9■□□□□ 0.46
CBX1-202ENST00000393408 KPNA3O00505 521 aaPredicted RBP17.89■□□□□ 0.45
CBX1-202ENST00000393408 PDPK1O15530 556 aa17.89■□□□□ 0.45
CBX1-202ENST00000393408 TBX19O60806 448 aa17.89■□□□□ 0.45
CBX1-202ENST00000393408 B4GALT2O60909 372 aa17.89■□□□□ 0.45
CBX1-202ENST00000393408 PAPLNO95428 1278 aa17.89■□□□□ 0.45
CBX1-202ENST00000393408 CXCL14O95715 111 aa17.89■□□□□ 0.45
CBX1-202ENST00000393408 MANFP55145 182 aaKnown RBP17.89■□□□□ 0.45
CBX1-202ENST00000393408 NFE2L1Q14494 772 aa17.89■□□□□ 0.45
CBX1-202ENST00000393408 ZNF77Q15935 545 aa17.89■□□□□ 0.45
CBX1-202ENST00000393408 CASP12Q6UXS9 341 aa17.89■□□□□ 0.45
CBX1-202ENST00000393408 SLC7A5P1Q8MH63 180 aa17.89■□□□□ 0.45
CBX1-202ENST00000393408 C2orf73Q8N5S3 287 aaPredicted RBP17.89■□□□□ 0.45
CBX1-202ENST00000393408 ASB15Q8WXK1 588 aa17.89■□□□□ 0.45
CBX1-202ENST00000393408 LINC00615Q96LM1 132 aaPredicted RBP17.89■□□□□ 0.45
CBX1-202ENST00000393408 FUZQ9BT04 418 aa17.89■□□□□ 0.45
CBX1-202ENST00000393408 MND1Q9BWT6 205 aa17.89■□□□□ 0.45
CBX1-202ENST00000393408 NPAP1Q9NZP6 1156 aa17.89■□□□□ 0.45
CBX1-202ENST00000393408 MARK1Q9P0L2 795 aa17.89■□□□□ 0.45
CBX1-202ENST00000393408 TBC1D14Q9P2M4 693 aa17.89■□□□□ 0.45
CBX1-202ENST00000393408 PLAGL1Q9UM63 463 aa17.89■□□□□ 0.45
CBX1-202ENST00000393408 RPL36Q9Y3U8 105 aaKnown RBP17.89■□□□□ 0.45
CBX1-202ENST00000393408 SNX11Q9Y5W9 270 aa17.89■□□□□ 0.45
CBX1-202ENST00000393408 V9GYH0 126 aa17.89■□□□□ 0.45
CBX1-202ENST00000393408 ABHD14A-ACY1A0A1B0GW23 586 aa17.89■□□□□ 0.45
CBX1-202ENST00000393408 H3BN98 237 aa17.89■□□□□ 0.45
CBX1-202ENST00000393408 RTCAO00442 366 aaKnown RBP17.89■□□□□ 0.45
CBX1-202ENST00000393408 MMP20O60882 483 aa17.89■□□□□ 0.45
CBX1-202ENST00000393408 POP7O75817 140 aaKnown RBP17.89■□□□□ 0.45
CBX1-202ENST00000393408 PDE9AO76083 593 aa17.89■□□□□ 0.45
CBX1-202ENST00000393408 ADH1AP07327 375 aa17.89■□□□□ 0.45
CBX1-202ENST00000393408 HBQ1P09105 142 aa17.89■□□□□ 0.45
CBX1-202ENST00000393408 DDX6P26196 483 aaKnown RBP eCLIP17.89■□□□□ 0.456e-12■■■□□ 18.3
CBX1-202ENST00000393408 KCNJ5P48544 419 aa17.89■□□□□ 0.45
CBX1-202ENST00000393408 MAPK12P53778 367 aa17.89■□□□□ 0.45
CBX1-202ENST00000393408 TRIM60Q495X7 471 aa17.89■□□□□ 0.45
CBX1-202ENST00000393408 MFSD4BQ5TF39 518 aa17.89■□□□□ 0.45
CBX1-202ENST00000393408 RNLSQ5VYX0 342 aa17.89■□□□□ 0.45
CBX1-202ENST00000393408 DEF8Q6ZN54 512 aa17.89■□□□□ 0.45
CBX1-202ENST00000393408 C6orf120Q7Z4R8 191 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms