RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 B3GNT7Q8NFL0 401 aa7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 TCP10LQ8TDR4 215 aa7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 PTPMT1Q8WUK0 201 aaPredicted RBP7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 APIPQ96GX9 242 aa7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 ZNF354BQ96LW1 612 aa7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 ZIM3Q96PE6 472 aa7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 TAAR6Q96RI8 345 aa7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 GATA5Q9BWX5 397 aaPredicted RBP7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 EBPLQ9BY08 206 aa7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 DEFB126Q9BYW3 111 aa7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 SLC29A3Q9BZD2 475 aa7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 ACPTQ9BZG2 426 aa7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 OR8D2Q9GZM6 311 aa7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 IQCGQ9H095 443 aaKnown RBP7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 CENPHQ9H3R5 247 aa7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 DDX31Q9H8H2 851 aaKnown RBP7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 ADAP2Q9NPF8 381 aa7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 KLHL1Q9NR64 748 aa7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 OXSMQ9NWU1 459 aa7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 LYARQ9NX58 379 aaKnown RBP7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 TEKT2Q9UIF3 430 aa7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 PHF11Q9UIL8 331 aa7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 SNX6Q9UNH7 406 aa7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 PLLPQ9Y342 182 aa7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 COPG1Q9Y678 874 aaKnown RBP7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 CLCA3PQ9Y6N3 262 aa7.15□□□□□ -1.26
HMGB3P1-201ENST00000393368 SPTA1P02549 2419 aa7.15□□□□□ -1.27
HMGB3P1-201ENST00000393368 HELZ2Q9BYK8 2649 aaKnown RBP7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 TMEM200CA6NKL6 621 aa7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 TMEM233B4DJY2 109 aa7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 ULK1O75385 1050 aa7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 CRCPO75575 148 aa7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 WISP2O76076 250 aa7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 ESRRBO95718 433 aa7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 KRT6AP02538 564 aa7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 KRT6BP04259 564 aa7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 CHRNGP07510 517 aa7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 ALDH3A1P30838 453 aa7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 CD96P40200 585 aa7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 BUD31P41223 144 aaPredicted RBP7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 TSFMP43897 325 aaKnown RBP7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 STT3AP46977 705 aa7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 KRT6CP48668 564 aa7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 CLCN2P51788 898 aa7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 GPR143P51810 404 aa7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 MAPK12P53778 367 aa7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 PKNOX1P55347 436 aa7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 MLF1P58340 268 aa7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 TAS2R50P59544 299 aa7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 DNAJB13P59910 316 aa7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 AP2B1P63010 937 aa7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 RAE1P78406 368 aaKnown RBP7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 IGLV3-21P80748 117 aaPredicted RBP7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 OC90Q02509 493 aaPredicted RBP7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 DUSP2Q05923 314 aa7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 NR6A1Q15406 480 aa7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 OR1C1Q15619 314 aa7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 MEP1AQ16819 746 aa7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 CEP85LQ5SZL2 805 aa7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 NDUFAF5Q5TEU4 345 aa7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 LIPMQ5VYY2 423 aa7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 ATCAYQ86WG3 371 aa7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 RPS19BP1Q86WX3 136 aaKnown RBP7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 MYRIPQ8NFW9 859 aa7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 OR14A16Q8NHC5 309 aa7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 CDC26Q8NHZ8 85 aa7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 RDH11Q8TC12 318 aa7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 AGR3Q8TD06 166 aa7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 SLC2A12Q8TD20 617 aa7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 GRHL3Q8TE85 626 aa7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 HAS2Q92819 552 aa7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 TANKQ92844 425 aa7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 ZDHHC16Q969W1 377 aa7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 CCDC126Q96EE4 140 aa7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 VMP1Q96GC9 406 aa7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 PKNOX2Q96KN3 472 aa7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 DGAT2Q96PD7 388 aa7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 SMC6Q96SB8 1091 aa7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 ROPN1BQ9BZX4 212 aaPredicted RBP7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 CLMPQ9H6B4 373 aa7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 ROPN1Q9HAT0 212 aaPredicted RBP7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 MKS1Q9NXB0 559 aa7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 PSD3Q9NYI0 1048 aa7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 VPS29Q9UBQ0 182 aa7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 VTI1BQ9UEU0 232 aa7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 PPT2Q9UMR5 302 aa7.14□□□□□ -1.27
HMGB3P1-201ENST00000393368 FASNP49327 2511 aaKnown RBP7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 BAHCC1Q9P281 2608 aa7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 TRAV17A0A0B4J275 112 aa7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 WDR91A4D1P6 747 aa7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 WWP2O00308 870 aa7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 RGS16O15492 202 aaPredicted RBP7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 TYROBPO43914 113 aa7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 PCDH7O60245 1069 aa7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 OR10H2O60403 315 aa7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 ZNF354AO60765 605 aaPredicted RBP7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 PRAMEF2O60811 474 aa7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 VPS4BO75351 444 aa7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 OR2J2O76002 312 aa7.13□□□□□ -1.27
HMGB3P1-201ENST00000393368 NEURL1O76050 574 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms