RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 CSDE1O75534 798 aaKnown RBP2.18□□□□□ -2.06
TRAV40-201ENST00000390467 GRAP2O75791 330 aa2.18□□□□□ -2.06
TRAV40-201ENST00000390467 OR6A2O95222 327 aa2.18□□□□□ -2.06
TRAV40-201ENST00000390467 RPN1P04843 607 aaKnown RBP2.18□□□□□ -2.06
TRAV40-201ENST00000390467 PROS1P07225 676 aa2.18□□□□□ -2.06
TRAV40-201ENST00000390467 FCGR3AP08637 254 aa2.18□□□□□ -2.06
TRAV40-201ENST00000390467 VIMP08670 466 aaKnown RBP2.18□□□□□ -2.06
TRAV40-201ENST00000390467 P4HA1P13674 534 aa2.18□□□□□ -2.06
TRAV40-201ENST00000390467 CD1EP15812 388 aa2.18□□□□□ -2.06
TRAV40-201ENST00000390467 OR1D2P34982 312 aa2.18□□□□□ -2.06
TRAV40-201ENST00000390467 FNTAP49354 379 aa2.18□□□□□ -2.06
TRAV40-201ENST00000390467 NDST1P52848 882 aa2.18□□□□□ -2.06
TRAV40-201ENST00000390467 KIAA0040Q15053 153 aa2.18□□□□□ -2.06
TRAV40-201ENST00000390467 AGAP6Q5VW22 663 aa2.18□□□□□ -2.06
TRAV40-201ENST00000390467 TRAT1Q6PIZ9 186 aa2.18□□□□□ -2.06
TRAV40-201ENST00000390467 ABRAXAS1Q6UWZ7 409 aa2.18□□□□□ -2.06
TRAV40-201ENST00000390467 NHLRC1Q6VVB1 395 aa2.18□□□□□ -2.06
TRAV40-201ENST00000390467 SIGLEC15Q6ZMC9 328 aa2.18□□□□□ -2.06
TRAV40-201ENST00000390467 GCNT7Q6ZNI0 430 aa2.18□□□□□ -2.06
TRAV40-201ENST00000390467 WDR49Q8IV35 697 aa2.18□□□□□ -2.06
TRAV40-201ENST00000390467 GPATCH11Q8N954 259 aa2.18□□□□□ -2.06
TRAV40-201ENST00000390467 CHDHQ8NE62 594 aaPredicted RBP2.18□□□□□ -2.06
TRAV40-201ENST00000390467 VN1R17PQ8TDU5 208 aa2.18□□□□□ -2.06
TRAV40-201ENST00000390467 MRPL24Q96A35 216 aaKnown RBP2.18□□□□□ -2.06
TRAV40-201ENST00000390467 PNPLA2Q96AD5 504 aa2.18□□□□□ -2.06
TRAV40-201ENST00000390467 RAB3CQ96E17 227 aa2.18□□□□□ -2.06
TRAV40-201ENST00000390467 SGF29Q96ES7 293 aa2.18□□□□□ -2.06
TRAV40-201ENST00000390467 ZNF799Q96GE5 643 aa2.18□□□□□ -2.06
TRAV40-201ENST00000390467 RBM18Q96H35 190 aaKnown RBP2.18□□□□□ -2.06
TRAV40-201ENST00000390467 VSIG2Q96IQ7 327 aa2.18□□□□□ -2.06
TRAV40-201ENST00000390467 RAB40CQ96S21 281 aa2.18□□□□□ -2.06
TRAV40-201ENST00000390467 ATG101Q9BSB4 218 aa2.18□□□□□ -2.06
TRAV40-201ENST00000390467 ABCC13Q9NSE7 274 aa2.18□□□□□ -2.06
TRAV40-201ENST00000390467 FAM212BQ9NTI7 297 aaPredicted RBP2.18□□□□□ -2.06
TRAV40-201ENST00000390467 EXOC6BQ9Y2D4 811 aa2.18□□□□□ -2.06
TRAV40-201ENST00000390467 KIAA1217Q5T5P2 1943 aa2.18□□□□□ -2.06
TRAV40-201ENST00000390467 CTDSPLO15194 276 aa2.17□□□□□ -2.06
TRAV40-201ENST00000390467 ZFYP08048 801 aaPredicted RBP2.17□□□□□ -2.06
TRAV40-201ENST00000390467 SLC35E2P0CK97 266 aa2.17□□□□□ -2.06
TRAV40-201ENST00000390467 PGAM2P15259 253 aa2.17□□□□□ -2.06
TRAV40-201ENST00000390467 GLRA1P23415 457 aa2.17□□□□□ -2.06
TRAV40-201ENST00000390467 KRT20P35900 424 aa2.17□□□□□ -2.06
TRAV40-201ENST00000390467 MAGEA9P43362 315 aa2.17□□□□□ -2.06
TRAV40-201ENST00000390467 NPBWR1P48145 328 aa2.17□□□□□ -2.06
TRAV40-201ENST00000390467 STX17P56962 302 aa2.17□□□□□ -2.06
TRAV40-201ENST00000390467 RALBP1Q15311 655 aa2.17□□□□□ -2.06
TRAV40-201ENST00000390467 ANKRD55Q3KP44 614 aa2.17□□□□□ -2.06
TRAV40-201ENST00000390467 UNC50Q53HI1 259 aa2.17□□□□□ -2.06
TRAV40-201ENST00000390467 DCAF12Q5T6F0 453 aa2.17□□□□□ -2.06
TRAV40-201ENST00000390467 CAPN13Q6MZZ7 669 aaPredicted RBP2.17□□□□□ -2.06
TRAV40-201ENST00000390467 SPATA19Q7Z5L4 167 aa2.17□□□□□ -2.06
TRAV40-201ENST00000390467 FBXW8Q8N3Y1 598 aa2.17□□□□□ -2.06
TRAV40-201ENST00000390467 KIAA0895Q8NCT3 520 aa2.17□□□□□ -2.06
TRAV40-201ENST00000390467 OR4F5Q8NH21 305 aa2.17□□□□□ -2.06
TRAV40-201ENST00000390467 FRAT1Q92837 279 aaPredicted RBP2.17□□□□□ -2.06
TRAV40-201ENST00000390467 SIPA1Q96FS4 1042 aa2.17□□□□□ -2.06
TRAV40-201ENST00000390467 PCED1BQ96HM7 432 aa2.17□□□□□ -2.06
TRAV40-201ENST00000390467 CNDP2Q96KP4 475 aaKnown RBP2.17□□□□□ -2.06
TRAV40-201ENST00000390467 CXXC4Q9H2H0 198 aa2.17□□□□□ -2.06
TRAV40-201ENST00000390467 IL1RL2Q9HB29 575 aa2.17□□□□□ -2.06
TRAV40-201ENST00000390467 GPR173Q9NS66 373 aa2.17□□□□□ -2.06
TRAV40-201ENST00000390467 TERF2IPQ9NYB0 399 aa2.17□□□□□ -2.06
TRAV40-201ENST00000390467 GPR132Q9UNW8 380 aa2.17□□□□□ -2.06
TRAV40-201ENST00000390467 OR1A2Q9Y585 309 aa2.17□□□□□ -2.06
TRAV40-201ENST00000390467 FRG2CA6NGY1 282 aa2.16□□□□□ -2.06
TRAV40-201ENST00000390467 ZFP92A6NM28 416 aa2.16□□□□□ -2.06
TRAV40-201ENST00000390467 RNF212BA8MTL3 300 aa2.16□□□□□ -2.06
TRAV40-201ENST00000390467 H0YIG0 161 aa2.16□□□□□ -2.06
TRAV40-201ENST00000390467 ST8SIA3O43173 380 aa2.16□□□□□ -2.06
TRAV40-201ENST00000390467 ANXA9O76027 345 aa2.16□□□□□ -2.06
TRAV40-201ENST00000390467 LETM1O95202 739 aaPredicted RBP2.16□□□□□ -2.06
TRAV40-201ENST00000390467 PDGFBP01127 241 aaPredicted RBP2.16□□□□□ -2.06
TRAV40-201ENST00000390467 HSD17B1P14061 328 aa2.16□□□□□ -2.06
TRAV40-201ENST00000390467 MTIF2P46199 727 aaKnown RBP2.16□□□□□ -2.06
TRAV40-201ENST00000390467 CAPZA1P52907 286 aa2.16□□□□□ -2.06
TRAV40-201ENST00000390467 UCNP55089 124 aa2.16□□□□□ -2.06
TRAV40-201ENST00000390467 GSTO1P78417 241 aa2.16□□□□□ -2.06
TRAV40-201ENST00000390467 MFGE8Q08431 387 aaPredicted RBP2.16□□□□□ -2.06
TRAV40-201ENST00000390467 CNPY1Q3B7I2 92 aa2.16□□□□□ -2.06
TRAV40-201ENST00000390467 IQCCQ4KMZ1 466 aa2.16□□□□□ -2.06
TRAV40-201ENST00000390467 FAM43BQ6ZT52 329 aaPredicted RBP2.16□□□□□ -2.06
TRAV40-201ENST00000390467 DZIP1Q86YF9 867 aaKnown RBP2.16□□□□□ -2.06
TRAV40-201ENST00000390467 LAX1Q8IWV1 398 aa2.16□□□□□ -2.06
TRAV40-201ENST00000390467 CNPY4Q8N129 248 aa2.16□□□□□ -2.06
TRAV40-201ENST00000390467 GPR137CQ8N3F9 429 aa2.16□□□□□ -2.06
TRAV40-201ENST00000390467 CCDC197Q8NCU1 140 aa2.16□□□□□ -2.06
TRAV40-201ENST00000390467 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.16□□□□□ -2.06
TRAV40-201ENST00000390467 FAF2Q96CS3 445 aa2.16□□□□□ -2.06
TRAV40-201ENST00000390467 SNRNP40Q96DI7 357 aaKnown RBP2.16□□□□□ -2.06
TRAV40-201ENST00000390467 PIWIL1Q96J94 861 aaKnown RBP2.16□□□□□ -2.06
TRAV40-201ENST00000390467 RASL10BQ96S79 203 aa2.16□□□□□ -2.06
TRAV40-201ENST00000390467 FERMT1Q9BQL6 677 aa2.16□□□□□ -2.06
TRAV40-201ENST00000390467 ST6GALNAC5Q9BVH7 336 aa2.16□□□□□ -2.06
TRAV40-201ENST00000390467 LSG1Q9H089 658 aaKnown RBP2.16□□□□□ -2.06
TRAV40-201ENST00000390467 DPEP3Q9H4B8 488 aa2.16□□□□□ -2.06
TRAV40-201ENST00000390467 TAS2R16Q9NYV7 291 aa2.16□□□□□ -2.06
TRAV40-201ENST00000390467 TMEM9Q9P0T7 183 aa2.16□□□□□ -2.06
TRAV40-201ENST00000390467 RPS6KB2Q9UBS0 482 aa2.16□□□□□ -2.06
TRAV40-201ENST00000390467 ANAPC5Q9UJX4 755 aa2.16□□□□□ -2.06
TRAV40-201ENST00000390467 ARID1AO14497 2285 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms