RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 FAM46DQ8NEK8 389 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 BCL7CQ8WUZ0 217 aaPredicted RBP13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 PIH1D2Q8WWB5 315 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 ST8SIA2Q92186 375 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 STARD7Q9NQZ5 370 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 SDHAF2Q9NX18 166 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 HCSTQ9UBK5 93 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 GLS2Q9UI32 602 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 ACSL5Q9ULC5 683 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 MAB21L2Q9Y586 359 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 MFSD2BA6NFX1 497 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 IQCF5A8MTL0 148 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 MAGEB17A8MXT2 336 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 WDPCPO95876 746 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 GLUD1P00367 558 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 OR56A5P0C7T3 313 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 CPEP16870 476 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 OR1G1P47890 313 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 CRISP1P54107 249 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 SELENOWP63302 87 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 CYP4F8P98187 520 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 MTAPQ13126 283 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 CAMK2DQ13557 499 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 GRM7Q14831 915 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 TEAD4Q15561 434 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 RNLSQ5VYX0 342 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 CHMP1BQ7LBR1 199 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 LUZP2Q86TE4 346 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 SPATA2LQ8IUW3 424 aaPredicted RBP13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 PLA2G15Q8NCC3 412 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 TM9SF4Q92544 642 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 SIPA1Q96FS4 1042 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 FOPNLQ96NB1 174 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 ZNF416Q9BWM5 594 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.99□□□□□ -0.179e-6■■□□□ 13.2
VPS9D1-201ENST00000389386 SLC6A17Q9H1V8 727 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 DNAJC27Q9NZQ0 273 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 TRPS1Q9UHF7 1281 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 KIF25Q9UIL4 384 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 YARS2Q9Y2Z4 477 aaKnown RBP13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 PDE4DIPQ5VU43 2346 aa13.98□□□□□ -0.17
VPS9D1-201ENST00000389386 TUBAL3A6NHL2 446 aa13.98□□□□□ -0.17
VPS9D1-201ENST00000389386 LZTS3O60299 673 aaPredicted RBP13.98□□□□□ -0.17
VPS9D1-201ENST00000389386 PTP4A3O75365 173 aa13.98□□□□□ -0.17
VPS9D1-201ENST00000389386 HLA-EP13747 358 aa13.98□□□□□ -0.17
VPS9D1-201ENST00000389386 CST5P28325 142 aaPredicted RBP13.98□□□□□ -0.17
VPS9D1-201ENST00000389386 CTBP2P56545 445 aa13.98□□□□□ -0.17
VPS9D1-201ENST00000389386 SNRPGP62308 76 aaKnown RBP13.98□□□□□ -0.17
VPS9D1-201ENST00000389386 RIPPLY1Q0D2K3 151 aa13.98□□□□□ -0.17
VPS9D1-201ENST00000389386 C1DQ13901 141 aaKnown RBP13.98□□□□□ -0.17
VPS9D1-201ENST00000389386 MBTPS1Q14703 1052 aa13.98□□□□□ -0.17
VPS9D1-201ENST00000389386 TAF12Q16514 161 aa13.98□□□□□ -0.17
VPS9D1-201ENST00000389386 SPDYE7PQ495Y7 208 aa13.98□□□□□ -0.17
VPS9D1-201ENST00000389386 SAMD14Q8IZD0 417 aaPredicted RBP13.98□□□□□ -0.17
VPS9D1-201ENST00000389386 SENP5Q96HI0 755 aaPredicted RBP13.98□□□□□ -0.17
VPS9D1-201ENST00000389386 RNF208Q9H0X6 261 aa13.98□□□□□ -0.17
VPS9D1-201ENST00000389386 ABCG8Q9H221 673 aa13.98□□□□□ -0.17
VPS9D1-201ENST00000389386 SLC22A23A1A5C7 686 aa13.98□□□□□ -0.17
VPS9D1-201ENST00000389386 PRAMEF25A6NGN4 478 aa13.98□□□□□ -0.17
VPS9D1-201ENST00000389386 SCN2BO60939 215 aa13.98□□□□□ -0.17
VPS9D1-201ENST00000389386 GNRH1P01148 92 aa13.98□□□□□ -0.17
VPS9D1-201ENST00000389386 EBLN1P0CF75 366 aa13.98□□□□□ -0.17
VPS9D1-201ENST00000389386 BPIP17213 487 aa13.98□□□□□ -0.17
VPS9D1-201ENST00000389386 F8A1P23610 371 aa13.98□□□□□ -0.17
VPS9D1-201ENST00000389386 OR1E2P47887 323 aa13.98□□□□□ -0.17
VPS9D1-201ENST00000389386 WNT3P56703 355 aa13.98□□□□□ -0.17
VPS9D1-201ENST00000389386 C2orf80Q0P641 193 aa13.98□□□□□ -0.17
VPS9D1-201ENST00000389386 SCD5Q86SK9 330 aa13.98□□□□□ -0.17
VPS9D1-201ENST00000389386 METTL3Q86U44 580 aaKnown RBP13.98□□□□□ -0.17
VPS9D1-201ENST00000389386 FAM9CQ8IZT9 166 aa13.98□□□□□ -0.17
VPS9D1-201ENST00000389386 MAL2Q969L2 176 aa13.98□□□□□ -0.17
VPS9D1-201ENST00000389386 RADILQ96JH8 1075 aa13.98□□□□□ -0.17
VPS9D1-201ENST00000389386 PKMYT1Q99640 499 aa13.98□□□□□ -0.17
VPS9D1-201ENST00000389386 NTMT1Q9BV86 223 aa13.98□□□□□ -0.17
VPS9D1-201ENST00000389386 RBCK1Q9BYM8 510 aa13.98□□□□□ -0.17
VPS9D1-201ENST00000389386 CHST8Q9H2A9 424 aa13.98□□□□□ -0.17
VPS9D1-201ENST00000389386 ADAM30Q9UKF2 790 aa13.98□□□□□ -0.17
VPS9D1-201ENST00000389386 COPS3Q9UNS2 423 aa13.98□□□□□ -0.17
VPS9D1-201ENST00000389386 A0A1W2PQH9 124 aa13.97□□□□□ -0.17
VPS9D1-201ENST00000389386 DHFRP00374 187 aa13.97□□□□□ -0.17
VPS9D1-201ENST00000389386 HMBSP08397 361 aa13.97□□□□□ -0.17
VPS9D1-201ENST00000389386 RAB3AP20336 220 aa13.97□□□□□ -0.17
VPS9D1-201ENST00000389386 POU1F1P28069 291 aa13.97□□□□□ -0.17
VPS9D1-201ENST00000389386 HLA-FP30511 346 aa13.97□□□□□ -0.17
VPS9D1-201ENST00000389386 PBX3P40426 434 aa13.97□□□□□ -0.17
VPS9D1-201ENST00000389386 ATP12AP54707 1039 aa13.97□□□□□ -0.17
VPS9D1-201ENST00000389386 CCDC85BQ15834 202 aaPredicted RBP13.97□□□□□ -0.17
VPS9D1-201ENST00000389386 PLK5Q496M5 336 aa13.97□□□□□ -0.17
VPS9D1-201ENST00000389386 CD276Q5ZPR3 534 aa13.97□□□□□ -0.17
VPS9D1-201ENST00000389386 USP30Q70CQ3 517 aa13.97□□□□□ -0.17
VPS9D1-201ENST00000389386 WDR48Q8TAF3 677 aa13.97□□□□□ -0.17
VPS9D1-201ENST00000389386 NXPE2Q96DL1 559 aa13.97□□□□□ -0.17
VPS9D1-201ENST00000389386 ASIC4Q96FT7 647 aa13.97□□□□□ -0.17
VPS9D1-201ENST00000389386 SLC6A18Q96N87 628 aa13.97□□□□□ -0.17
VPS9D1-201ENST00000389386 TMEM175Q9BSA9 504 aa13.97□□□□□ -0.17
VPS9D1-201ENST00000389386 TMEM168Q9H0V1 697 aa13.97□□□□□ -0.17
VPS9D1-201ENST00000389386 SLC6A15Q9H2J7 730 aa13.97□□□□□ -0.17
VPS9D1-201ENST00000389386 SYNDIG1Q9H7V2 258 aa13.97□□□□□ -0.17
VPS9D1-201ENST00000389386 PCDHB16Q9NRJ7 776 aa13.97□□□□□ -0.17
VPS9D1-201ENST00000389386 EXO1Q9UQ84 846 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms