RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 PRPF38BQ5VTL8 546 aaKnown RBP12.57□□□□□ -0.4
TRAPPC9-201ENST00000389328 SLC5A11Q8WWX8 675 aa12.57□□□□□ -0.4
TRAPPC9-201ENST00000389328 TMEM19Q96HH6 336 aa12.57□□□□□ -0.4
TRAPPC9-201ENST00000389328 MAB21L2Q9Y586 359 aa12.57□□□□□ -0.4
TRAPPC9-201ENST00000389328 M0QZQ0 153 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 SLC9A3R1O14745 358 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 KCNK5O95279 499 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 SLC16A8O95907 504 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 FAUP35544 74 aaKnown RBP12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 CAPZA2P47755 286 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 RPL34P49207 117 aaKnown RBP12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 MSANTD1Q6ZTZ1 278 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 APCDD1Q8J025 514 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 OR4K5Q8NGD3 323 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 SLC12A9Q9BXP2 914 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 MKRN2Q9H000 416 aaKnown RBP12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 TRIM36Q9NQ86 728 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 MBD2Q9UBB5 411 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 ASPDHA6ND91 283 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 ANHXE9PGG2 379 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 NUDT14O95848 222 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 MMP2P08253 660 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 MRPL3P09001 348 aaKnown RBP12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 UQCRC2P22695 453 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 ETV3P41162 512 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 MASP1P48740 699 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 CTBSQ01459 385 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 GPR19Q15760 415 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 TMEM44Q2T9K0 475 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 FAM46CQ5VWP2 391 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 GDPGP1Q6ZNW5 385 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 COMMD6Q7Z4G1 85 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 CYB5D2Q8WUJ1 264 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 PCNPQ8WW12 178 aaKnown RBP12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 NEDD4LQ96PU5 975 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 NIPSNAP1Q9BPW8 284 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 SPATA9Q9BWV2 254 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 ELOVL2Q9NXB9 296 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 TRBV23OR9-2A0A075B6M9 112 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 MYADML2A6NDP7 307 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 MNDAP41218 407 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 MTNR1AP48039 350 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 CLCN7P51798 805 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 MCCD1P59942 119 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 C2orf15Q8WU43 125 aaKnown RBP12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 SLC35B4Q969S0 331 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 CLIP3Q96DZ5 547 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 SLC39A13Q96H72 371 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 PPP1R16AQ96I34 528 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 NEUROD4Q9HD90 331 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 NUMA1Q14980 2115 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 LOC105369274A0A096LPK9 316 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 A0A1W2PRU2 124 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 DRGXA6NNA5 263 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 SMAD6O43541 496 aaKnown RBP12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 DRD5P21918 477 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 PCGF2P35227 344 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 UGT2B10P36537 528 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 GPR68Q15743 365 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 LINC00299Q6ZSB3 139 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 C6orf120Q7Z4R8 191 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 ZNF438Q7Z4V0 828 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 GALNT13Q8IUC8 556 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 OR4N4Q8N0Y3 316 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 LSM14AQ8ND56 463 aaKnown RBP12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 OR7G3Q8NG95 312 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 OR6K6Q8NGW6 343 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 TESCQ96BS2 214 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 P2RY13Q9BPV8 354 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 ADAP2Q9NPF8 381 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 NANSQ9NR45 359 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 MRPL15Q9P015 296 aaKnown RBP12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 FKBP7Q9Y680 259 aa12.56□□□□□ -0.4
TRAPPC9-201ENST00000389328 ZNF840PA6NDX5 716 aa12.55□□□□□ -0.4
TRAPPC9-201ENST00000389328 FAM227AF5H4B4 570 aa12.55□□□□□ -0.4
TRAPPC9-201ENST00000389328 AOC2O75106 756 aa12.55□□□□□ -0.4
TRAPPC9-201ENST00000389328 S100A9P06702 114 aaKnown RBP12.55□□□□□ -0.4
TRAPPC9-201ENST00000389328 TGM1P22735 817 aa12.55□□□□□ -0.4
TRAPPC9-201ENST00000389328 TGFBR2P37173 567 aa12.55□□□□□ -0.4
TRAPPC9-201ENST00000389328 CDK10Q15131 360 aa12.55□□□□□ -0.4
TRAPPC9-201ENST00000389328 C22orf39Q6P5X5 142 aa12.55□□□□□ -0.4
TRAPPC9-201ENST00000389328 NPAS4Q8IUM7 802 aa12.55□□□□□ -0.4
TRAPPC9-201ENST00000389328 ZNF557Q8N988 423 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC9-201ENST00000389328 IL17FQ96PD4 163 aa12.55□□□□□ -0.4
TRAPPC9-201ENST00000389328 NDC1Q9BTX1 674 aa12.55□□□□□ -0.4
TRAPPC9-201ENST00000389328 CACNG6Q9BXT2 260 aa12.55□□□□□ -0.4
TRAPPC9-201ENST00000389328 TMEM27Q9HBJ8 222 aa12.55□□□□□ -0.4
TRAPPC9-201ENST00000389328 HCN3Q9P1Z3 774 aa12.55□□□□□ -0.4
TRAPPC9-201ENST00000389328 UBQLN2Q9UHD9 624 aa12.55□□□□□ -0.4
TRAPPC9-201ENST00000389328 PGAP2Q9UHJ9 254 aa12.55□□□□□ -0.4
TRAPPC9-201ENST00000389328 POP7O75817 140 aaKnown RBP12.55□□□□□ -0.4
TRAPPC9-201ENST00000389328 HLA-EP13747 358 aa12.55□□□□□ -0.4
TRAPPC9-201ENST00000389328 SPNP16150 400 aa12.55□□□□□ -0.4
TRAPPC9-201ENST00000389328 CHMP24386 653 aa12.55□□□□□ -0.4
TRAPPC9-201ENST00000389328 HOXD9P28356 352 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC9-201ENST00000389328 ST3GAL3Q11203 375 aa12.55□□□□□ -0.4
TRAPPC9-201ENST00000389328 BIKQ13323 160 aa12.55□□□□□ -0.4
TRAPPC9-201ENST00000389328 SLC25A25Q6KCM7 469 aa12.55□□□□□ -0.4
TRAPPC9-201ENST00000389328 FAM129CQ86XR2 697 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms