RNA–Protein interactions for RNA: ENST00000382490.9

MSRA-202, Transcript of methionine sulfoxide reductase A, humanhuman

TSL 1 (best) BASIC

Gene MSRA, Length 1,460 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-202ENST00000382490 CCDC116Q8IYX3 515 aa12.39□□□□□ -0.43
MSRA-202ENST00000382490 SHISA5Q8N114 240 aa12.39□□□□□ -0.43
MSRA-202ENST00000382490 CA13Q8N1Q1 262 aa12.39□□□□□ -0.43
MSRA-202ENST00000382490 FAM86B1Q8N7N1 296 aa12.39□□□□□ -0.43
MSRA-202ENST00000382490 FAM181AQ8N9Y4 354 aa12.39□□□□□ -0.43
MSRA-202ENST00000382490 ADCY4Q8NFM4 1077 aa12.39□□□□□ -0.43
MSRA-202ENST00000382490 ZFP28Q8NHY6 868 aa12.39□□□□□ -0.43
MSRA-202ENST00000382490 CSF3RQ99062 836 aa12.39□□□□□ -0.43
MSRA-202ENST00000382490 CHID1Q9BWS9 393 aa12.39□□□□□ -0.43
MSRA-202ENST00000382490 KLHL4Q9C0H6 718 aa12.39□□□□□ -0.43
MSRA-202ENST00000382490 TMEM38AQ9H6F2 299 aa12.39□□□□□ -0.43
MSRA-202ENST00000382490 NEUROD4Q9HD90 331 aa12.39□□□□□ -0.43
MSRA-202ENST00000382490 PDE7BQ9NP56 450 aa12.39□□□□□ -0.43
MSRA-202ENST00000382490 ENAMQ9NRM1 1142 aa12.39□□□□□ -0.43
MSRA-202ENST00000382490 PSME2Q9UL46 239 aa12.39□□□□□ -0.43
MSRA-202ENST00000382490 MAP4K5Q9Y4K4 846 aa12.39□□□□□ -0.43
MSRA-202ENST00000382490 SNX8Q9Y5X2 465 aa12.39□□□□□ -0.43
MSRA-202ENST00000382490 TMEM131Q92545 1883 aa12.38□□□□□ -0.43
MSRA-202ENST00000382490 TP53BP1Q12888 1972 aaPredicted RBP12.38□□□□□ -0.43
MSRA-202ENST00000382490 RNF103-CHMP3A0A140T963 221 aa12.38□□□□□ -0.43
MSRA-202ENST00000382490 ZNF860A6NHJ4 632 aa12.38□□□□□ -0.43
MSRA-202ENST00000382490 SGK494L7N484 410 aa12.38□□□□□ -0.43
MSRA-202ENST00000382490 FOXS1O43638 330 aa12.38□□□□□ -0.43
MSRA-202ENST00000382490 DUX1O43812 170 aa12.38□□□□□ -0.43
MSRA-202ENST00000382490 PRKD3O94806 890 aa12.38□□□□□ -0.43
MSRA-202ENST00000382490 SERPINA1P01009 418 aa12.38□□□□□ -0.43
MSRA-202ENST00000382490 C8orf89P0DMQ9 161 aa12.38□□□□□ -0.43
MSRA-202ENST00000382490 ALPPL2P10696 532 aa12.38□□□□□ -0.43
MSRA-202ENST00000382490 CSF2RBP32927 897 aa12.38□□□□□ -0.43
MSRA-202ENST00000382490 PCGF2P35227 344 aa12.38□□□□□ -0.43
MSRA-202ENST00000382490 FEN1P39748 380 aaKnown RBP12.38□□□□□ -0.43
MSRA-202ENST00000382490 BUD31P41223 144 aaPredicted RBP12.38□□□□□ -0.43
MSRA-202ENST00000382490 MLLT3P42568 568 aaPredicted RBP12.38□□□□□ -0.43
MSRA-202ENST00000382490 PPM1FP49593 454 aaPredicted RBP12.38□□□□□ -0.43
MSRA-202ENST00000382490 NCBP2P52298 156 aaKnown RBP eCLIP12.38□□□□□ -0.43
MSRA-202ENST00000382490 CASP9P55211 416 aa12.38□□□□□ -0.43
MSRA-202ENST00000382490 NR0B2Q15466 257 aa12.38□□□□□ -0.43
MSRA-202ENST00000382490 LRRC36Q1X8D7 754 aa12.38□□□□□ -0.43
MSRA-202ENST00000382490 SFT2D3Q587I9 215 aa12.38□□□□□ -0.43
MSRA-202ENST00000382490 GCNT6Q5T4J0 391 aa12.38□□□□□ -0.43
MSRA-202ENST00000382490 SPRED1Q7Z699 444 aa12.38□□□□□ -0.43
MSRA-202ENST00000382490 EID3Q8N140 333 aa12.38□□□□□ -0.43
MSRA-202ENST00000382490 ANKFN1Q8N957 763 aa12.38□□□□□ -0.43
MSRA-202ENST00000382490 OR4K14Q8NGD5 310 aa12.38□□□□□ -0.43
MSRA-202ENST00000382490 OR6C4Q8NGE1 309 aa12.38□□□□□ -0.43
MSRA-202ENST00000382490 OR5T3Q8NGG3 340 aa12.38□□□□□ -0.43
MSRA-202ENST00000382490 FBXO30Q8TB52 745 aa12.38□□□□□ -0.43
MSRA-202ENST00000382490 DNAJC9Q8WXX5 260 aa12.38□□□□□ -0.43
MSRA-202ENST00000382490 POP5Q969H6 163 aaKnown RBP12.38□□□□□ -0.43
MSRA-202ENST00000382490 NCLNQ969V3 563 aa12.38□□□□□ -0.43
MSRA-202ENST00000382490 CCDC74AQ96AQ1 378 aa12.38□□□□□ -0.43
MSRA-202ENST00000382490 SEPHS2Q99611 448 aa12.38□□□□□ -0.43
MSRA-202ENST00000382490 UGT2B28Q9BY64 529 aa12.38□□□□□ -0.43
MSRA-202ENST00000382490 SPRTNQ9H040 489 aaPredicted RBP12.38□□□□□ -0.43
MSRA-202ENST00000382490 ANKHQ9HCJ1 492 aa12.38□□□□□ -0.43
MSRA-202ENST00000382490 AGPAT4Q9NRZ5 378 aa12.38□□□□□ -0.43
MSRA-202ENST00000382490 TMEM9Q9P0T7 183 aa12.38□□□□□ -0.43
MSRA-202ENST00000382490 RAPGEFL1Q9UHV5 662 aa12.38□□□□□ -0.43
MSRA-202ENST00000382490 PCDH15Q96QU1 1955 aa12.38□□□□□ -0.43
MSRA-202ENST00000382490 MN1Q10571 1320 aaPredicted RBP12.38□□□□□ -0.43
MSRA-202ENST00000382490 ZDBF2Q9HCK1 2354 aa12.37□□□□□ -0.43
MSRA-202ENST00000382490 SCN3AQ9NY46 2000 aa12.37□□□□□ -0.43
MSRA-202ENST00000382490 FITM1A5D6W6 292 aa12.37□□□□□ -0.43
MSRA-202ENST00000382490 FAM227AF5H4B4 570 aa12.37□□□□□ -0.43
MSRA-202ENST00000382490 ARHGAP33O14559 1287 aa12.37□□□□□ -0.43
MSRA-202ENST00000382490 CASC3O15234 703 aaKnown RBP12.37□□□□□ -0.43
MSRA-202ENST00000382490 CHST10O43529 356 aa12.37□□□□□ -0.43
MSRA-202ENST00000382490 ARAFP10398 606 aa12.37□□□□□ -0.43
MSRA-202ENST00000382490 FASP25445 335 aa12.37□□□□□ -0.43
MSRA-202ENST00000382490 TLX1P31314 330 aaPredicted RBP12.37□□□□□ -0.43
MSRA-202ENST00000382490 MPIP34949 423 aa12.37□□□□□ -0.43
MSRA-202ENST00000382490 PI4KAP42356 2102 aa12.37□□□□□ -0.43
MSRA-202ENST00000382490 SIM1P81133 766 aaPredicted RBP12.37□□□□□ -0.43
MSRA-202ENST00000382490 CHRNB3Q05901 458 aa12.37□□□□□ -0.43
MSRA-202ENST00000382490 COL9A2Q14055 689 aaPredicted RBP12.37□□□□□ -0.43
MSRA-202ENST00000382490 FAM53BQ14153 422 aa12.37□□□□□ -0.43
MSRA-202ENST00000382490 SPIDRQ14159 915 aa12.37□□□□□ -0.43
MSRA-202ENST00000382490 ANGPT1Q15389 498 aa12.37□□□□□ -0.43
MSRA-202ENST00000382490 INAVAQ3KP66 663 aa12.37□□□□□ -0.43
MSRA-202ENST00000382490 SPDYE7PQ495Y7 208 aa12.37□□□□□ -0.43
MSRA-202ENST00000382490 FAM98BQ52LJ0 330 aaKnown RBP12.37□□□□□ -0.43
MSRA-202ENST00000382490 TCTE1Q5JU00 501 aa12.37□□□□□ -0.43
MSRA-202ENST00000382490 GARNL3Q5VVW2 1013 aa12.37□□□□□ -0.43
MSRA-202ENST00000382490 OR52E8Q6IFG1 317 aa12.37□□□□□ -0.43
MSRA-202ENST00000382490 WDR74Q6RFH5 385 aaPredicted RBP12.37□□□□□ -0.43
MSRA-202ENST00000382490 TMEM64Q6YI46 380 aa12.37□□□□□ -0.43
MSRA-202ENST00000382490 C11orf65Q8NCR3 313 aa12.37□□□□□ -0.43
MSRA-202ENST00000382490 OR9A4Q8NGU2 314 aa12.37□□□□□ -0.43
MSRA-202ENST00000382490 OR2I1PQ8NGU4 316 aa12.37□□□□□ -0.43
MSRA-202ENST00000382490 SFXN5Q8TD22 340 aa12.37□□□□□ -0.43
MSRA-202ENST00000382490 MAL2Q969L2 176 aa12.37□□□□□ -0.43
MSRA-202ENST00000382490 PYURFQ96I23 114 aa12.37□□□□□ -0.43
MSRA-202ENST00000382490 RNF145Q96MT1 663 aa12.37□□□□□ -0.43
MSRA-202ENST00000382490 SEMA6AQ9H2E6 1030 aa12.37□□□□□ -0.43
MSRA-202ENST00000382490 VCX3BQ9H321 246 aa12.37□□□□□ -0.43
MSRA-202ENST00000382490 GIMAP4Q9NUV9 329 aa12.37□□□□□ -0.43
MSRA-202ENST00000382490 DNAAF2Q9NVR5 837 aaKnown RBP12.37□□□□□ -0.43
MSRA-202ENST00000382490 SOHLH2Q9NX45 425 aa12.37□□□□□ -0.43
MSRA-202ENST00000382490 KLHL3Q9UH77 587 aa12.37□□□□□ -0.43
MSRA-202ENST00000382490 FAF1Q9UNN5 650 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms