RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 OR52P1PQ8NH57 321 aa13.22□□□□□ -0.29
SDC1-202ENST00000381150 ZNF296Q8WUU4 475 aaPredicted RBP13.22□□□□□ -0.29
SDC1-202ENST00000381150 KLHL6Q8WZ60 621 aa13.22□□□□□ -0.29
SDC1-202ENST00000381150 NELL2Q99435 816 aa13.22□□□□□ -0.29
SDC1-202ENST00000381150 MED28Q9H204 178 aa13.22□□□□□ -0.29
SDC1-202ENST00000381150 RC3H2Q9HBD1 1191 aaKnown RBP13.22□□□□□ -0.29
SDC1-202ENST00000381150 C5orf42Q9H799 3197 aa13.21□□□□□ -0.29
SDC1-202ENST00000381150 LYRM1O43325 122 aa13.21□□□□□ -0.29
SDC1-202ENST00000381150 ORC5O43913 435 aa13.21□□□□□ -0.29
SDC1-202ENST00000381150 MRPS14O60783 128 aaKnown RBP13.21□□□□□ -0.29
SDC1-202ENST00000381150 ATP6V1E1P36543 226 aa13.21□□□□□ -0.29
SDC1-202ENST00000381150 ETV6P41212 452 aa13.21□□□□□ -0.29
SDC1-202ENST00000381150 GSTM5P46439 218 aa13.21□□□□□ -0.29
SDC1-202ENST00000381150 CACNG1Q06432 222 aa13.21□□□□□ -0.29
SDC1-202ENST00000381150 MICAQ29983 383 aa13.21□□□□□ -0.29
SDC1-202ENST00000381150 XKR6Q5GH73 641 aa13.21□□□□□ -0.29
SDC1-202ENST00000381150 TXNDC8Q6A555 127 aa13.21□□□□□ -0.29
SDC1-202ENST00000381150 VN1R5Q7Z5H4 357 aa13.21□□□□□ -0.29
SDC1-202ENST00000381150 TMCO2Q7Z6W1 182 aaPredicted RBP13.21□□□□□ -0.29
SDC1-202ENST00000381150 ARL14EPQ8N8R7 260 aaPredicted RBP13.21□□□□□ -0.29
SDC1-202ENST00000381150 AKAP1Q92667 903 aaKnown RBP eCLIP13.21□□□□□ -0.293e-10■■■■□ 22.1
SDC1-202ENST00000381150 LOC105369274A0A096LPK9 316 aa13.21□□□□□ -0.29
SDC1-202ENST00000381150 ARSBP15848 533 aa13.21□□□□□ -0.29
SDC1-202ENST00000381150 PTPN6P29350 595 aa13.21□□□□□ -0.29
SDC1-202ENST00000381150 RHOAP61586 193 aa13.21□□□□□ -0.29
SDC1-202ENST00000381150 RPS26P62854 115 aaKnown RBP13.21□□□□□ -0.29
SDC1-202ENST00000381150 OR4N4Q8N0Y3 316 aa13.21□□□□□ -0.29
SDC1-202ENST00000381150 FBXL6Q8N531 539 aa13.21□□□□□ -0.29
SDC1-202ENST00000381150 LRRC17Q8N6Y2 441 aa13.21□□□□□ -0.29
SDC1-202ENST00000381150 C9orf43Q8TAL5 461 aaPredicted RBP13.21□□□□□ -0.29
SDC1-202ENST00000381150 UPRTQ96BW1 309 aa13.21□□□□□ -0.29
SDC1-202ENST00000381150 EPYCQ99645 322 aa13.21□□□□□ -0.29
SDC1-202ENST00000381150 SEC14L4Q9UDX3 406 aa13.21□□□□□ -0.29
SDC1-202ENST00000381150 CLEC4EQ9ULY5 219 aa13.21□□□□□ -0.29
SDC1-202ENST00000381150 STUB1Q9UNE7 303 aa13.21□□□□□ -0.29
SDC1-202ENST00000381150 A0A075B6Q4 140 aa13.21□□□□□ -0.3
SDC1-202ENST00000381150 ANXA4P09525 319 aaPredicted RBP13.21□□□□□ -0.3
SDC1-202ENST00000381150 POLR2CP19387 275 aaPredicted RBP13.21□□□□□ -0.3
SDC1-202ENST00000381150 PRPS1L1P21108 318 aa13.21□□□□□ -0.3
SDC1-202ENST00000381150 CSTF2P33240 577 aaKnown RBP eCLIP13.21□□□□□ -0.3
SDC1-202ENST00000381150 C2orf80Q0P641 193 aa13.21□□□□□ -0.3
SDC1-202ENST00000381150 C19orf57Q0VDD7 668 aa13.21□□□□□ -0.3
SDC1-202ENST00000381150 BTN1A1Q13410 526 aa13.21□□□□□ -0.3
SDC1-202ENST00000381150 GAB1Q13480 694 aa13.21□□□□□ -0.3
SDC1-202ENST00000381150 INSL4Q14641 139 aa13.21□□□□□ -0.3
SDC1-202ENST00000381150 XKRXQ6PP77 449 aa13.21□□□□□ -0.3
SDC1-202ENST00000381150 ZNF767PQ75MW2 155 aa13.21□□□□□ -0.3
SDC1-202ENST00000381150 LAPTM4BQ86VI4 370 aa13.21□□□□□ -0.3
SDC1-202ENST00000381150 COMMD7Q86VX2 200 aa13.21□□□□□ -0.3
SDC1-202ENST00000381150 LMNTD1Q8N9Z9 388 aa13.21□□□□□ -0.3
SDC1-202ENST00000381150 DCAF4L2Q8NA75 395 aa13.21□□□□□ -0.3
SDC1-202ENST00000381150 HJURPQ8NCD3 748 aaPredicted RBP13.21□□□□□ -0.3
SDC1-202ENST00000381150 AUTS2Q8WXX7 1259 aa13.21□□□□□ -0.3
SDC1-202ENST00000381150 ZBED6CLQ96FA7 236 aaPredicted RBP13.21□□□□□ -0.3
SDC1-202ENST00000381150 C17orf62Q9BQA9 187 aa13.21□□□□□ -0.3
SDC1-202ENST00000381150 TSSK6Q9BXA6 273 aa13.21□□□□□ -0.3
SDC1-202ENST00000381150 GABARAPL3Q9BY60 117 aa13.21□□□□□ -0.3
SDC1-202ENST00000381150 MIXL1Q9H2W2 232 aa13.21□□□□□ -0.3
SDC1-202ENST00000381150 TXNL4BQ9NX01 149 aaKnown RBP13.21□□□□□ -0.3
SDC1-202ENST00000381150 SYNDIG1LA6NDD5 238 aa13.2□□□□□ -0.3
SDC1-202ENST00000381150 NRG2O14511 850 aaPredicted RBP13.2□□□□□ -0.3
SDC1-202ENST00000381150 PDPK1O15530 556 aa13.2□□□□□ -0.3
SDC1-202ENST00000381150 CLDN7O95471 211 aa13.2□□□□□ -0.3
SDC1-202ENST00000381150 GSTM1P09488 218 aa13.2□□□□□ -0.3
SDC1-202ENST00000381150 ITGALP20701 1170 aa13.2□□□□□ -0.3
SDC1-202ENST00000381150 PTNP21246 168 aa13.2□□□□□ -0.3
SDC1-202ENST00000381150 ENPP1P22413 925 aa13.2□□□□□ -0.3
SDC1-202ENST00000381150 MNX1P50219 401 aaPredicted RBP13.2□□□□□ -0.3
SDC1-202ENST00000381150 CRISP1P54107 249 aa13.2□□□□□ -0.3
SDC1-202ENST00000381150 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.2□□□□□ -0.3
SDC1-202ENST00000381150 FCN2Q15485 313 aa13.2□□□□□ -0.3
SDC1-202ENST00000381150 TAF12Q16514 161 aa13.2□□□□□ -0.3
SDC1-202ENST00000381150 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.2□□□□□ -0.3
SDC1-202ENST00000381150 IER5LQ5T953 404 aa13.2□□□□□ -0.3
SDC1-202ENST00000381150 IDO2Q6ZQW0 420 aa13.2□□□□□ -0.3
SDC1-202ENST00000381150 USP45Q70EL2 814 aa13.2□□□□□ -0.3
SDC1-202ENST00000381150 TRIM46Q7Z4K8 759 aa13.2□□□□□ -0.3
SDC1-202ENST00000381150 C1orf52Q8N6N3 182 aaKnown RBP13.2□□□□□ -0.3
SDC1-202ENST00000381150 ASIC4Q96FT7 647 aa13.2□□□□□ -0.3
SDC1-202ENST00000381150 ATP6V1HQ9UI12 483 aa13.2□□□□□ -0.3
SDC1-202ENST00000381150 ING4Q9UNL4 249 aa13.2□□□□□ -0.3
SDC1-202ENST00000381150 RWDD3Q9Y3V2 267 aa13.2□□□□□ -0.3
SDC1-202ENST00000381150 OARD1Q9Y530 152 aa13.2□□□□□ -0.3
SDC1-202ENST00000381150 INSL5Q9Y5Q6 135 aa13.2□□□□□ -0.3
SDC1-202ENST00000381150 HBQ1P09105 142 aa13.2□□□□□ -0.3
SDC1-202ENST00000381150 RAB14P61106 215 aa13.2□□□□□ -0.3
SDC1-202ENST00000381150 SELENOWP63302 87 aa13.2□□□□□ -0.3
SDC1-202ENST00000381150 ASAH1Q13510 395 aa13.2□□□□□ -0.3
SDC1-202ENST00000381150 SCARB2Q14108 478 aa13.2□□□□□ -0.3
SDC1-202ENST00000381150 RGNQ15493 299 aa13.2□□□□□ -0.3
SDC1-202ENST00000381150 FRG2Q64ET8 278 aa13.2□□□□□ -0.3
SDC1-202ENST00000381150 FRMPD2BQ6IN97 320 aa13.2□□□□□ -0.3
SDC1-202ENST00000381150 MTFR2Q6P444 385 aa13.2□□□□□ -0.3
SDC1-202ENST00000381150 BHLHB9Q6PI77 547 aa13.2□□□□□ -0.3
SDC1-202ENST00000381150 CCDC149Q6ZUS6 474 aa13.2□□□□□ -0.3
SDC1-202ENST00000381150 WDR53Q7Z5U6 358 aaPredicted RBP13.2□□□□□ -0.3
SDC1-202ENST00000381150 OR52E4Q8NGH9 312 aa13.2□□□□□ -0.3
SDC1-202ENST00000381150 CEP76Q8TAP6 659 aa13.2□□□□□ -0.3
SDC1-202ENST00000381150 TMEM80Q96HE8 168 aa13.2□□□□□ -0.3
SDC1-202ENST00000381150 KCTD7Q96MP8 289 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms