RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 TBCDQ9BTW9 1192 aa14.76□□□□□ -0.05
VCX3A-201ENST00000381089 POPDC3Q9HBV1 291 aa14.76□□□□□ -0.05
VCX3A-201ENST00000381089 ZFP64Q9NPA5 681 aa14.76□□□□□ -0.05
VCX3A-201ENST00000381089 QPCTLQ9NXS2 382 aa14.76□□□□□ -0.05
VCX3A-201ENST00000381089 NSMCE4AQ9NXX6 385 aa14.76□□□□□ -0.05
VCX3A-201ENST00000381089 CRIM1Q9NZV1 1036 aa14.76□□□□□ -0.05
VCX3A-201ENST00000381089 MTRF1LQ9UGC7 380 aaKnown RBP14.76□□□□□ -0.05
VCX3A-201ENST00000381089 FOXD3Q9UJU5 478 aaPredicted RBP14.76□□□□□ -0.05
VCX3A-201ENST00000381089 PLEKHA6Q9Y2H5 1048 aa14.76□□□□□ -0.05
VCX3A-201ENST00000381089 EML6Q6ZMW3 1958 aa14.76□□□□□ -0.05
VCX3A-201ENST00000381089 ZNF469Q96JG9 3925 aaPredicted RBP14.75□□□□□ -0.05
VCX3A-201ENST00000381089 A6NNC1 897 aa14.75□□□□□ -0.05
VCX3A-201ENST00000381089 PIGAP37287 484 aa14.75□□□□□ -0.05
VCX3A-201ENST00000381089 PAFAH1B1P43034 410 aa14.75□□□□□ -0.05
VCX3A-201ENST00000381089 ASCL1P50553 236 aa14.75□□□□□ -0.05
VCX3A-201ENST00000381089 MGAT5Q09328 741 aa14.75□□□□□ -0.05
VCX3A-201ENST00000381089 FOXD4Q12950 439 aaPredicted RBP14.75□□□□□ -0.05
VCX3A-201ENST00000381089 ZNF460Q14592 562 aa14.75□□□□□ -0.05
VCX3A-201ENST00000381089 SF3B4Q15427 424 aaKnown RBP eCLIP14.75□□□□□ -0.05
VCX3A-201ENST00000381089 C18orf21Q32NC0 220 aaPredicted RBP14.75□□□□□ -0.05
VCX3A-201ENST00000381089 STEAP4Q687X5 459 aa14.75□□□□□ -0.05
VCX3A-201ENST00000381089 ZC3HC1Q86WB0 502 aaKnown RBP14.75□□□□□ -0.05
VCX3A-201ENST00000381089 CDC20BQ86Y33 519 aa14.75□□□□□ -0.05
VCX3A-201ENST00000381089 KIF18AQ8NI77 898 aa14.75□□□□□ -0.05
VCX3A-201ENST00000381089 ZNF721Q8TF20 911 aa14.75□□□□□ -0.05
VCX3A-201ENST00000381089 UBE2E3Q969T4 207 aa14.75□□□□□ -0.05
VCX3A-201ENST00000381089 RBM18Q96H35 190 aaKnown RBP14.75□□□□□ -0.05
VCX3A-201ENST00000381089 F2RL3Q96RI0 385 aa14.75□□□□□ -0.05
VCX3A-201ENST00000381089 KRT12Q99456 494 aa14.75□□□□□ -0.05
VCX3A-201ENST00000381089 CNPPD1Q9BV87 410 aa14.75□□□□□ -0.05
VCX3A-201ENST00000381089 ZNF703Q9H7S9 590 aaPredicted RBP14.75□□□□□ -0.05
VCX3A-201ENST00000381089 PRDM7Q9NQW5 492 aa14.75□□□□□ -0.05
VCX3A-201ENST00000381089 CNIH4Q9P003 139 aa14.75□□□□□ -0.05
VCX3A-201ENST00000381089 SPRR3Q9UBC9 169 aa14.75□□□□□ -0.05
VCX3A-201ENST00000381089 ACANP16112 2415 aa14.74□□□□□ -0.05
VCX3A-201ENST00000381089 PROM1O43490 865 aa14.74□□□□□ -0.05
VCX3A-201ENST00000381089 STK16O75716 305 aa14.74□□□□□ -0.05
VCX3A-201ENST00000381089 ETHE1O95571 254 aa14.74□□□□□ -0.05
VCX3A-201ENST00000381089 BMP5P22003 454 aa14.74□□□□□ -0.05
VCX3A-201ENST00000381089 CPN2P22792 545 aa14.74□□□□□ -0.05
VCX3A-201ENST00000381089 SERPINB3P29508 390 aa14.74□□□□□ -0.05
VCX3A-201ENST00000381089 GGT5P36269 586 aa14.74□□□□□ -0.05
VCX3A-201ENST00000381089 MSH2P43246 934 aa14.74□□□□□ -0.05
VCX3A-201ENST00000381089 TAS2R39P59534 338 aa14.74□□□□□ -0.05
VCX3A-201ENST00000381089 PLIN5Q00G26 463 aa14.74□□□□□ -0.05
VCX3A-201ENST00000381089 ID2Q02363 134 aa14.74□□□□□ -0.05
VCX3A-201ENST00000381089 SNTB1Q13884 538 aaKnown RBP14.74□□□□□ -0.05
VCX3A-201ENST00000381089 PDK4Q16654 411 aa14.74□□□□□ -0.05
VCX3A-201ENST00000381089 AP5B1Q2VPB7 878 aa14.74□□□□□ -0.05
VCX3A-201ENST00000381089 ZNF791Q3KP31 576 aaPredicted RBP14.74□□□□□ -0.05
VCX3A-201ENST00000381089 TMEM35AQ53FP2 167 aa14.74□□□□□ -0.05
VCX3A-201ENST00000381089 CDKL4Q5MAI5 379 aa14.74□□□□□ -0.05
VCX3A-201ENST00000381089 SULT1C3Q6IMI6 304 aa14.74□□□□□ -0.05
VCX3A-201ENST00000381089 MAATS1Q7Z4T9 603 aa14.74□□□□□ -0.05
VCX3A-201ENST00000381089 VN1R5Q7Z5H4 357 aa14.74□□□□□ -0.05
VCX3A-201ENST00000381089 KLHL7Q8IXQ5 586 aa14.74□□□□□ -0.05
VCX3A-201ENST00000381089 ULK2Q8IYT8 1036 aa14.74□□□□□ -0.05
VCX3A-201ENST00000381089 MMP21Q8N119 569 aa14.74□□□□□ -0.05
VCX3A-201ENST00000381089 FAM13CQ8NE31 585 aa14.74□□□□□ -0.05
VCX3A-201ENST00000381089 NEIL3Q8TAT5 605 aa14.74□□□□□ -0.05
VCX3A-201ENST00000381089 PAQR8Q8TEZ7 354 aa14.74□□□□□ -0.05
VCX3A-201ENST00000381089 RNASE6Q93091 150 aaKnown RBP14.74□□□□□ -0.05
VCX3A-201ENST00000381089 MBD6Q96DN6 1003 aa14.74□□□□□ -0.05
VCX3A-201ENST00000381089 SPACA9Q96E40 222 aaPredicted RBP14.74□□□□□ -0.05
VCX3A-201ENST00000381089 JSRP1Q96MG2 331 aaPredicted RBP14.74□□□□□ -0.05
VCX3A-201ENST00000381089 MAPKAP1Q9BPZ7 522 aa14.74□□□□□ -0.05
VCX3A-201ENST00000381089 PHACTR1Q9C0D0 580 aa14.74□□□□□ -0.05
VCX3A-201ENST00000381089 DERL2Q9GZP9 239 aa14.74□□□□□ -0.05
VCX3A-201ENST00000381089 LIME1Q9H400 295 aa14.74□□□□□ -0.05
VCX3A-201ENST00000381089 ACKR4Q9NPB9 350 aa14.74□□□□□ -0.05
VCX3A-201ENST00000381089 SEMA4BQ9NPR2 832 aaPredicted RBP14.74□□□□□ -0.05
VCX3A-201ENST00000381089 MS4A12Q9NXJ0 267 aa14.74□□□□□ -0.05
VCX3A-201ENST00000381089 TEX264Q9Y6I9 313 aa14.74□□□□□ -0.05
VCX3A-201ENST00000381089 ARHGAP21Q5T5U3 1957 aa14.74□□□□□ -0.05
VCX3A-201ENST00000381089 AHRRA9YTQ3 701 aa14.73□□□□□ -0.05
VCX3A-201ENST00000381089 ZNF354AO60765 605 aaPredicted RBP14.73□□□□□ -0.05
VCX3A-201ENST00000381089 TBX6O95947 436 aaPredicted RBP14.73□□□□□ -0.05
VCX3A-201ENST00000381089 S100BP04271 92 aaPredicted RBP14.73□□□□□ -0.05
VCX3A-201ENST00000381089 ENDOUP21128 410 aaKnown RBP14.73□□□□□ -0.05
VCX3A-201ENST00000381089 HIST1H1TP22492 207 aaPredicted RBP14.73□□□□□ -0.05
VCX3A-201ENST00000381089 ATP5A1P25705 553 aaKnown RBP14.73□□□□□ -0.05
VCX3A-201ENST00000381089 SSR2P43308 183 aa14.73□□□□□ -0.05
VCX3A-201ENST00000381089 STT3AP46977 705 aa14.73□□□□□ -0.05
VCX3A-201ENST00000381089 ARL4CP56559 192 aa14.73□□□□□ -0.05
VCX3A-201ENST00000381089 IRF8Q02556 426 aa14.73□□□□□ -0.05
VCX3A-201ENST00000381089 DOC2AQ14183 400 aa14.73□□□□□ -0.05
VCX3A-201ENST00000381089 TBCELQ5QJ74 424 aa14.73□□□□□ -0.05
VCX3A-201ENST00000381089 PRAMEF20Q5VT98 475 aa14.73□□□□□ -0.05
VCX3A-201ENST00000381089 PAMR1Q6UXH9 720 aa14.73□□□□□ -0.05
VCX3A-201ENST00000381089 CHSY3Q70JA7 882 aa14.73□□□□□ -0.05
VCX3A-201ENST00000381089 SLC29A4Q7RTT9 530 aa14.73□□□□□ -0.05
VCX3A-201ENST00000381089 KIF18BQ86Y91 864 aa14.73□□□□□ -0.05
VCX3A-201ENST00000381089 GPSM1Q86YR5 675 aa14.73□□□□□ -0.05
VCX3A-201ENST00000381089 LRRC25Q8N386 305 aaPredicted RBP14.73□□□□□ -0.05
VCX3A-201ENST00000381089 ACOT4Q8N9L9 421 aa14.73□□□□□ -0.05
VCX3A-201ENST00000381089 ANKRD49Q8WVL7 239 aa14.73□□□□□ -0.05
VCX3A-201ENST00000381089 WDR34Q96EX3 536 aa14.73□□□□□ -0.05
VCX3A-201ENST00000381089 TSPAN17Q96FV3 270 aa14.73□□□□□ -0.05
VCX3A-201ENST00000381089 SENP5Q96HI0 755 aaPredicted RBP14.73□□□□□ -0.05
VCX3A-201ENST00000381089 CENPKQ9BS16 269 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms