RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 GGT5P36269 586 aa21.32■■□□□ 1
U2AF1-202ENST00000380276 OR4D1Q15615 310 aa21.32■■□□□ 1
U2AF1-202ENST00000380276 PIGGQ5H8A4 983 aa21.32■■□□□ 1
U2AF1-202ENST00000380276 SLC22A10Q63ZE4 541 aa21.32■■□□□ 1
U2AF1-202ENST00000380276 UBE3DQ7Z6J8 389 aa21.32■■□□□ 1
U2AF1-202ENST00000380276 LIX1Q8N485 282 aa21.32■■□□□ 1
U2AF1-202ENST00000380276 FAM13CQ8NE31 585 aa21.32■■□□□ 1
U2AF1-202ENST00000380276 ANKRD9Q96BM1 317 aaPredicted RBP21.32■■□□□ 1
U2AF1-202ENST00000380276 PPWD1Q96BP3 646 aaKnown RBP21.32■■□□□ 1
U2AF1-202ENST00000380276 GAL3ST4Q96RP7 486 aa21.32■■□□□ 1
U2AF1-202ENST00000380276 GPATCH1Q9BRR8 931 aaKnown RBP21.32■■□□□ 1
U2AF1-202ENST00000380276 TRMT1Q9NXH9 659 aaKnown RBP21.32■■□□□ 1
U2AF1-202ENST00000380276 SPRR3Q9UBC9 169 aa21.32■■□□□ 1
U2AF1-202ENST00000380276 BOKQ9UMX3 212 aaPredicted RBP21.32■■□□□ 1
U2AF1-202ENST00000380276 ZSCAN12O43309 604 aa21.31■■□□□ 1
U2AF1-202ENST00000380276 FGF17O60258 216 aa21.31■■□□□ 1
U2AF1-202ENST00000380276 GABRA1P14867 456 aa21.31■■□□□ 1
U2AF1-202ENST00000380276 CD1DP15813 335 aa21.31■■□□□ 1
U2AF1-202ENST00000380276 HIST1H1TP22492 207 aaPredicted RBP21.31■■□□□ 1
U2AF1-202ENST00000380276 KIR2DL3P43628 341 aa21.31■■□□□ 1
U2AF1-202ENST00000380276 RAP1GDS1P52306 607 aa21.31■■□□□ 1
U2AF1-202ENST00000380276 ATP6V0D1P61421 351 aa21.31■■□□□ 1
U2AF1-202ENST00000380276 PPP2R2AP63151 447 aa21.31■■□□□ 1
U2AF1-202ENST00000380276 DDX39BQ13838 428 aaKnown RBP21.31■■□□□ 1
U2AF1-202ENST00000380276 MPEG1Q2M385 716 aa21.31■■□□□ 1
U2AF1-202ENST00000380276 HYAL4Q2M3T9 481 aa21.31■■□□□ 1
U2AF1-202ENST00000380276 CHSY3Q70JA7 882 aa21.31■■□□□ 1
U2AF1-202ENST00000380276 C9orf40Q8IXQ3 194 aa21.31■■□□□ 1
U2AF1-202ENST00000380276 CHDHQ8NE62 594 aaPredicted RBP21.31■■□□□ 1
U2AF1-202ENST00000380276 WDR34Q96EX3 536 aa21.31■■□□□ 1
U2AF1-202ENST00000380276 SENP5Q96HI0 755 aaPredicted RBP21.31■■□□□ 1
U2AF1-202ENST00000380276 SLC6A15Q9H2J7 730 aa21.31■■□□□ 1
U2AF1-202ENST00000380276 SMYD2Q9NRG4 433 aa21.31■■□□□ 1
U2AF1-202ENST00000380276 EFCAB8A8MWE9 144 aa21.3■■□□□ 1
U2AF1-202ENST00000380276 LRATO95237 230 aa21.3■■□□□ 1
U2AF1-202ENST00000380276 STMN1P16949 149 aa21.3■■□□□ 1
U2AF1-202ENST00000380276 ENDOUP21128 410 aaKnown RBP21.3■■□□□ 1
U2AF1-202ENST00000380276 STT3AP46977 705 aa21.3■■□□□ 1
U2AF1-202ENST00000380276 TRPC1P48995 793 aa21.3■■□□□ 1
U2AF1-202ENST00000380276 PLIN5Q00G26 463 aa21.3■■□□□ 1
U2AF1-202ENST00000380276 SLAMF1Q13291 335 aa21.3■■□□□ 1
U2AF1-202ENST00000380276 CEBPEQ15744 281 aa21.3■■□□□ 1
U2AF1-202ENST00000380276 TMEM35AQ53FP2 167 aa21.3■■□□□ 1
U2AF1-202ENST00000380276 RIPPLY2Q5TAB7 128 aa21.3■■□□□ 1
U2AF1-202ENST00000380276 MED27Q6P2C8 311 aa21.3■■□□□ 1
U2AF1-202ENST00000380276 NUBPLQ8TB37 319 aa21.3■■□□□ 1
U2AF1-202ENST00000380276 ZNF473Q8WTR7 871 aaKnown RBP21.3■■□□□ 1
U2AF1-202ENST00000380276 CDKL2Q92772 493 aa21.3■■□□□ 1
U2AF1-202ENST00000380276 UBE2E3Q969T4 207 aa21.3■■□□□ 1
U2AF1-202ENST00000380276 RBM18Q96H35 190 aaKnown RBP21.3■■□□□ 1
U2AF1-202ENST00000380276 ART5Q96L15 291 aa21.3■■□□□ 1
U2AF1-202ENST00000380276 SORBS1Q9BX66 1292 aaKnown RBP21.3■■□□□ 1
U2AF1-202ENST00000380276 CLEC4MQ9H2X3 399 aaPredicted RBP21.3■■□□□ 1
U2AF1-202ENST00000380276 ZNF703Q9H7S9 590 aaPredicted RBP21.3■■□□□ 1
U2AF1-202ENST00000380276 B4GALT7Q9UBV7 327 aa21.3■■□□□ 1
U2AF1-202ENST00000380276 CTAG2O75638 210 aa21.29■■□□□ 1
U2AF1-202ENST00000380276 RFPL3SP0C7P2 107 aa21.29■■□□□ 1
U2AF1-202ENST00000380276 ILF2Q12905 390 aaKnown RBP21.29■■□□□ 1
U2AF1-202ENST00000380276 ZNF791Q3KP31 576 aaPredicted RBP21.29■■□□□ 1
U2AF1-202ENST00000380276 CDKL4Q5MAI5 379 aa21.29■■□□□ 1
U2AF1-202ENST00000380276 SLC29A4Q7RTT9 530 aa21.29■■□□□ 1
U2AF1-202ENST00000380276 LRRC70Q7Z2Q7 622 aa21.29■■□□□ 1
U2AF1-202ENST00000380276 PDPRQ8NCN5 879 aa21.29■■□□□ 1
U2AF1-202ENST00000380276 C7orf57Q8NEG2 295 aa21.29■■□□□ 1
U2AF1-202ENST00000380276 PYROXD1Q8WU10 500 aa21.29■■□□□ 1
U2AF1-202ENST00000380276 NINJ1Q92982 152 aa21.29■■□□□ 1
U2AF1-202ENST00000380276 SPACA9Q96E40 222 aaPredicted RBP21.29■■□□□ 1
U2AF1-202ENST00000380276 RMND5BQ96G75 393 aaPredicted RBP21.29■■□□□ 1
U2AF1-202ENST00000380276 POM121Q96HA1 1249 aa21.29■■□□□ 1
U2AF1-202ENST00000380276 FOXC2Q99958 501 aa21.29■■□□□ 1
U2AF1-202ENST00000380276 CD244Q9BZW8 370 aa21.29■■□□□ 1
U2AF1-202ENST00000380276 OR51B5Q9H339 312 aa21.29■■□□□ 1
U2AF1-202ENST00000380276 LIME1Q9H400 295 aa21.29■■□□□ 1
U2AF1-202ENST00000380276 RPF2Q9H7B2 306 aaKnown RBP21.29■■□□□ 1
U2AF1-202ENST00000380276 ZFP64Q9NPA5 681 aa21.29■■□□□ 1
U2AF1-202ENST00000380276 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.29■■□□□ 1
U2AF1-202ENST00000380276 PTBP2Q9UKA9 531 aaKnown RBP21.29■■□□□ 1
U2AF1-202ENST00000380276 SNX24Q9Y343 169 aa21.29■■□□□ 1
U2AF1-202ENST00000380276 SETD2Q9BYW2 2564 aaPredicted RBP21.28■■□□□ 1
U2AF1-202ENST00000380276 IQANK1A0A1B0GTG1 560 aa21.28■■□□□ 1
U2AF1-202ENST00000380276 SUPT3HB4E1H0 165 aa21.28■■□□□ 1
U2AF1-202ENST00000380276 HRKO00198 91 aa21.28■■□□□ 1
U2AF1-202ENST00000380276 SUPT3HO75486 399 aa21.28■■□□□ 1
U2AF1-202ENST00000380276 EPORP19235 508 aa21.28■■□□□ 1
U2AF1-202ENST00000380276 SSTR1P30872 391 aa21.28■■□□□ 1
U2AF1-202ENST00000380276 HERVK_113P63132 956 aa21.28■■□□□ 1
U2AF1-202ENST00000380276 ERVK-8P63133 956 aa21.28■■□□□ 1
U2AF1-202ENST00000380276 FBXW10Q5XX13 1052 aa21.28■■□□□ 1
U2AF1-202ENST00000380276 DGAT2L6Q6ZPD8 337 aa21.28■■□□□ 1
U2AF1-202ENST00000380276 MYLK4Q86YV6 388 aaPredicted RBP21.28■■□□□ 1
U2AF1-202ENST00000380276 RNF175Q8N4F7 328 aa21.28■■□□□ 1
U2AF1-202ENST00000380276 GOT1L1Q8NHS2 421 aaPredicted RBP21.28■■□□□ 1
U2AF1-202ENST00000380276 PAQR8Q8TEZ7 354 aa21.28■■□□□ 1
U2AF1-202ENST00000380276 LRRC46Q96FV0 321 aa21.28■■□□□ 1
U2AF1-202ENST00000380276 CMTM7Q96FZ5 175 aa21.28■■□□□ 1
U2AF1-202ENST00000380276 TMUB1Q9BVT8 246 aa21.28■■□□□ 1
U2AF1-202ENST00000380276 ERVK-6Q9BXR3 956 aa21.28■■□□□ 1
U2AF1-202ENST00000380276 ALG9Q9H6U8 611 aa21.28■■□□□ 1
U2AF1-202ENST00000380276 ST6GALNAC2Q9UJ37 374 aa21.28■■□□□ 1
U2AF1-202ENST00000380276 ERVK-19Q9WJR5 959 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms