RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 TMPRSS11DO60235 418 aa15.65■□□□□ 0.1
HMGN4-201ENST00000377575 LDLRP01130 860 aa15.65■□□□□ 0.1
HMGN4-201ENST00000377575 PYGBP11216 843 aa15.65■□□□□ 0.1
HMGN4-201ENST00000377575 ATP5F1P24539 256 aaPredicted RBP15.65■□□□□ 0.1
HMGN4-201ENST00000377575 MST1P26927 711 aa15.65■□□□□ 0.1
HMGN4-201ENST00000377575 KCNK10P57789 538 aa15.65■□□□□ 0.1
HMGN4-201ENST00000377575 FOLH1Q04609 750 aa15.65■□□□□ 0.1
HMGN4-201ENST00000377575 RBPJQ06330 500 aa15.65■□□□□ 0.1
HMGN4-201ENST00000377575 ZNF678Q5SXM1 525 aa15.65■□□□□ 0.1
HMGN4-201ENST00000377575 C18orf63Q68DL7 685 aa15.65■□□□□ 0.1
HMGN4-201ENST00000377575 LETMD1Q6P1Q0 360 aa15.65■□□□□ 0.1
HMGN4-201ENST00000377575 RPS27LQ71UM5 84 aaKnown RBP15.65■□□□□ 0.1
HMGN4-201ENST00000377575 GPALPP1Q8IXQ4 340 aa15.65■□□□□ 0.1
HMGN4-201ENST00000377575 CYP4Z2PQ8N1L4 340 aa15.65■□□□□ 0.1
HMGN4-201ENST00000377575 OR8K3Q8NH51 312 aa15.65■□□□□ 0.1
HMGN4-201ENST00000377575 MZB1Q8WU39 189 aa15.65■□□□□ 0.1
HMGN4-201ENST00000377575 RBM18Q96H35 190 aaKnown RBP15.65■□□□□ 0.1
HMGN4-201ENST00000377575 ART5Q96L15 291 aa15.65■□□□□ 0.1
HMGN4-201ENST00000377575 FRMD6Q96NE9 622 aa15.65■□□□□ 0.1
HMGN4-201ENST00000377575 DCDC2Q9UHG0 476 aa15.65■□□□□ 0.1
HMGN4-201ENST00000377575 ADAM29Q9UKF5 820 aa15.65■□□□□ 0.1
HMGN4-201ENST00000377575 STK38LQ9Y2H1 464 aa15.65■□□□□ 0.1
HMGN4-201ENST00000377575 ASB4Q9Y574 426 aa15.65■□□□□ 0.1
HMGN4-201ENST00000377575 UTP20O75691 2785 aaKnown RBP15.64■□□□□ 0.09
HMGN4-201ENST00000377575 A0A1B0GUH1 482 aa15.64■□□□□ 0.09
HMGN4-201ENST00000377575 PRKNO60260 465 aaPredicted RBP15.64■□□□□ 0.09
HMGN4-201ENST00000377575 GLRA3O75311 464 aa15.64■□□□□ 0.09
HMGN4-201ENST00000377575 PRKRAO75569 313 aaKnown RBP15.64■□□□□ 0.09
HMGN4-201ENST00000377575 SUPT7LO94864 414 aa15.64■□□□□ 0.09
HMGN4-201ENST00000377575 UNC5CO95185 931 aa15.64■□□□□ 0.09
HMGN4-201ENST00000377575 STSP08842 583 aa15.64■□□□□ 0.09
HMGN4-201ENST00000377575 ALOX15P16050 662 aaPredicted RBP15.64■□□□□ 0.09
HMGN4-201ENST00000377575 CDH13P55290 713 aa15.64■□□□□ 0.09
HMGN4-201ENST00000377575 ALDH6A1Q02252 535 aaKnown RBP15.64■□□□□ 0.09
HMGN4-201ENST00000377575 CLCQ05315 142 aa15.64■□□□□ 0.09
HMGN4-201ENST00000377575 RASA2Q15283 850 aa15.64■□□□□ 0.09
HMGN4-201ENST00000377575 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.64■□□□□ 0.09
HMGN4-201ENST00000377575 SGO1Q5FBB7 561 aa15.64■□□□□ 0.09
HMGN4-201ENST00000377575 OR52E8Q6IFG1 317 aa15.64■□□□□ 0.09
HMGN4-201ENST00000377575 OR4N5Q8IXE1 308 aa15.64■□□□□ 0.09
HMGN4-201ENST00000377575 ST13P4Q8IZP2 240 aaPredicted RBP15.64■□□□□ 0.09
HMGN4-201ENST00000377575 OR5L2Q8NGL0 311 aa15.64■□□□□ 0.09
HMGN4-201ENST00000377575 TRPC4APQ8TEL6 797 aa15.64■□□□□ 0.09
HMGN4-201ENST00000377575 SELENOMQ8WWX9 145 aa15.64■□□□□ 0.09
HMGN4-201ENST00000377575 ASB15Q8WXK1 588 aa15.64■□□□□ 0.09
HMGN4-201ENST00000377575 TMEM237Q96Q45 408 aa15.64■□□□□ 0.09
HMGN4-201ENST00000377575 ZNF382Q96SR6 550 aa15.64■□□□□ 0.09
HMGN4-201ENST00000377575 BRF2Q9HAW0 419 aa15.64■□□□□ 0.09
HMGN4-201ENST00000377575 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.64■□□□□ 0.09
HMGN4-201ENST00000377575 NMRK1Q9NWW6 199 aa15.64■□□□□ 0.09
HMGN4-201ENST00000377575 MYOTQ9UBF9 498 aa15.64■□□□□ 0.09
HMGN4-201ENST00000377575 SLC12A4Q9UP95 1085 aa15.64■□□□□ 0.09
HMGN4-201ENST00000377575 DIDO1Q9BTC0 2240 aaKnown RBP15.64■□□□□ 0.09
HMGN4-201ENST00000377575 A8MVJ9 347 aa15.63■□□□□ 0.09
HMGN4-201ENST00000377575 KLRC4-KLRK1H3BQV0 150 aa15.63■□□□□ 0.09
HMGN4-201ENST00000377575 LRRTM2O43300 516 aa15.63■□□□□ 0.09
HMGN4-201ENST00000377575 OR10H2O60403 315 aa15.63■□□□□ 0.09
HMGN4-201ENST00000377575 DLX3O60479 287 aa15.63■□□□□ 0.09
HMGN4-201ENST00000377575 OR2J2O76002 312 aa15.63■□□□□ 0.09
HMGN4-201ENST00000377575 AIFM1O95831 613 aa15.63■□□□□ 0.09
HMGN4-201ENST00000377575 RNF224P0DH78 156 aa15.63■□□□□ 0.09
HMGN4-201ENST00000377575 ZNF24P17028 368 aa15.63■□□□□ 0.09
HMGN4-201ENST00000377575 KRT15P19012 456 aa15.63■□□□□ 0.09
HMGN4-201ENST00000377575 TSPAN8P19075 237 aa15.63■□□□□ 0.09
HMGN4-201ENST00000377575 HSD17B3P37058 310 aa15.63■□□□□ 0.09
HMGN4-201ENST00000377575 RNF4P78317 190 aa15.63■□□□□ 0.09
HMGN4-201ENST00000377575 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.63■□□□□ 0.09
HMGN4-201ENST00000377575 ZNF227Q86WZ6 799 aa15.63■□□□□ 0.09
HMGN4-201ENST00000377575 TDRPQ86YL5 185 aa15.63■□□□□ 0.09
HMGN4-201ENST00000377575 POGLUT1Q8NBL1 392 aa15.63■□□□□ 0.09
HMGN4-201ENST00000377575 CCDC126Q96EE4 140 aa15.63■□□□□ 0.09
HMGN4-201ENST00000377575 L3HYPDHQ96EM0 354 aa15.63■□□□□ 0.09
HMGN4-201ENST00000377575 GPR137Q96N19 417 aa15.63■□□□□ 0.09
HMGN4-201ENST00000377575 MRPL1Q9BYD6 325 aaKnown RBP15.63■□□□□ 0.09
HMGN4-201ENST00000377575 TIMMDC1Q9NPL8 285 aa15.63■□□□□ 0.09
HMGN4-201ENST00000377575 HPF1Q9NWY4 346 aa15.63■□□□□ 0.09
HMGN4-201ENST00000377575 ERVK-11Q9UQG0 969 aa15.63■□□□□ 0.09
HMGN4-201ENST00000377575 A0A1B0GTL3 188 aa15.62■□□□□ 0.09
HMGN4-201ENST00000377575 A0A1W2PR48 441 aa15.62■□□□□ 0.09
HMGN4-201ENST00000377575 WIPF3A6NGB9 483 aa15.62■□□□□ 0.09
HMGN4-201ENST00000377575 GUCY1B2O75343 617 aa15.62■□□□□ 0.09
HMGN4-201ENST00000377575 OR4F21O95013 312 aa15.62■□□□□ 0.09
HMGN4-201ENST00000377575 GPR75O95800 540 aa15.62■□□□□ 0.09
HMGN4-201ENST00000377575 PDYNP01213 254 aa15.62■□□□□ 0.09
HMGN4-201ENST00000377575 KRT6AP02538 564 aa15.62■□□□□ 0.09
HMGN4-201ENST00000377575 GBAP04062 536 aa15.62■□□□□ 0.09
HMGN4-201ENST00000377575 KRT6BP04259 564 aa15.62■□□□□ 0.09
HMGN4-201ENST00000377575 SHBGP04278 402 aa15.62■□□□□ 0.09
HMGN4-201ENST00000377575 KLK1P06870 262 aa15.62■□□□□ 0.09
HMGN4-201ENST00000377575 HSD3B1P14060 373 aa15.62■□□□□ 0.09
HMGN4-201ENST00000377575 IMPDH1P20839 514 aa15.62■□□□□ 0.09
HMGN4-201ENST00000377575 HSD3B2P26439 372 aa15.62■□□□□ 0.09
HMGN4-201ENST00000377575 SLCO1A2P46721 670 aa15.62■□□□□ 0.09
HMGN4-201ENST00000377575 KRT6CP48668 564 aa15.62■□□□□ 0.09
HMGN4-201ENST00000377575 HK2P52789 917 aa15.62■□□□□ 0.09
HMGN4-201ENST00000377575 PRKAA2P54646 552 aa15.62■□□□□ 0.09
HMGN4-201ENST00000377575 SPRED3Q2MJR0 410 aa15.62■□□□□ 0.09
HMGN4-201ENST00000377575 UNC50Q53HI1 259 aa15.62■□□□□ 0.09
HMGN4-201ENST00000377575 KRTCAP3Q53RY4 240 aa15.62■□□□□ 0.09
HMGN4-201ENST00000377575 CCNYL2Q5T2Q4 361 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 274.3 ms