RNA–Protein interactions for RNA: ENST00000376919.3

SSX1-201, Transcript of SSX family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX1, Length 1,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1-201ENST00000376919 RPA3P35244 121 aaPredicted RBP5.38□□□□□ -1.55
SSX1-201ENST00000376919 SERPINB8P50452 374 aa5.38□□□□□ -1.55
SSX1-201ENST00000376919 SERPINB9P50453 376 aa5.38□□□□□ -1.55
SSX1-201ENST00000376919 RAB28P51157 221 aa5.38□□□□□ -1.55
SSX1-201ENST00000376919 CDKN2DP55273 166 aa5.38□□□□□ -1.55
SSX1-201ENST00000376919 RAB10P61026 200 aa5.38□□□□□ -1.55
SSX1-201ENST00000376919 ZNF844Q08AG5 666 aa5.38□□□□□ -1.55
SSX1-201ENST00000376919 TRA2AQ13595 282 aaKnown RBP eCLIP5.38□□□□□ -1.55
SSX1-201ENST00000376919 FHL3Q13643 280 aa5.38□□□□□ -1.55
SSX1-201ENST00000376919 CCNIQ14094 377 aa5.38□□□□□ -1.55
SSX1-201ENST00000376919 NR1D2Q14995 579 aa5.38□□□□□ -1.55
SSX1-201ENST00000376919 DEPDC1Q5TB30 811 aa5.38□□□□□ -1.55
SSX1-201ENST00000376919 KLC3Q6P597 504 aa5.38□□□□□ -1.55
SSX1-201ENST00000376919 ZNF549Q6P9A3 640 aa5.38□□□□□ -1.55
SSX1-201ENST00000376919 WDR74Q6RFH5 385 aaPredicted RBP5.38□□□□□ -1.55
SSX1-201ENST00000376919 DOK3Q7L591 496 aa5.38□□□□□ -1.55
SSX1-201ENST00000376919 ADCK2Q7Z695 626 aa5.38□□□□□ -1.55
SSX1-201ENST00000376919 ULK2Q8IYT8 1036 aa5.38□□□□□ -1.55
SSX1-201ENST00000376919 C2orf73Q8N5S3 287 aaPredicted RBP5.38□□□□□ -1.55
SSX1-201ENST00000376919 WDR36Q8NI36 951 aaKnown RBP5.38□□□□□ -1.55
SSX1-201ENST00000376919 MCOLN3Q8TDD5 553 aa5.38□□□□□ -1.55
SSX1-201ENST00000376919 EEF1AKMT1Q8WVE0 214 aa5.38□□□□□ -1.55
SSX1-201ENST00000376919 ZFPM2Q8WW38 1151 aa5.38□□□□□ -1.55
SSX1-201ENST00000376919 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.38□□□□□ -1.55
SSX1-201ENST00000376919 SLC22A18Q96BI1 424 aa5.38□□□□□ -1.55
SSX1-201ENST00000376919 CD180Q99467 661 aa5.38□□□□□ -1.55
SSX1-201ENST00000376919 PAFAH2Q99487 392 aa5.38□□□□□ -1.55
SSX1-201ENST00000376919 OLFM1Q99784 485 aa5.38□□□□□ -1.55
SSX1-201ENST00000376919 PTDSS2Q9BVG9 487 aa5.38□□□□□ -1.55
SSX1-201ENST00000376919 RABEP2Q9H5N1 569 aa5.38□□□□□ -1.55
SSX1-201ENST00000376919 CAB39LQ9H9S4 337 aa5.38□□□□□ -1.55
SSX1-201ENST00000376919 THSD1Q9NS62 852 aa5.38□□□□□ -1.55
SSX1-201ENST00000376919 ARL15Q9NXU5 204 aa5.38□□□□□ -1.55
SSX1-201ENST00000376919 UTP6Q9NYH9 597 aaKnown RBP5.38□□□□□ -1.55
SSX1-201ENST00000376919 TMEM9Q9P0T7 183 aa5.38□□□□□ -1.55
SSX1-201ENST00000376919 SPATA7Q9P0W8 599 aa5.38□□□□□ -1.55
SSX1-201ENST00000376919 GALPQ9UBC7 116 aa5.38□□□□□ -1.55
SSX1-201ENST00000376919 CTNNAL1Q9UBT7 734 aa5.38□□□□□ -1.55
SSX1-201ENST00000376919 ICKQ9UPZ9 632 aa5.38□□□□□ -1.55
SSX1-201ENST00000376919 ENTPD2Q9Y5L3 495 aa5.38□□□□□ -1.55
SSX1-201ENST00000376919 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.38□□□□□ -1.55
SSX1-201ENST00000376919 ADAMTS20P59510 1910 aa5.37□□□□□ -1.55
SSX1-201ENST00000376919 A0A087X1B8 175 aa5.37□□□□□ -1.55
SSX1-201ENST00000376919 LOC105369274A0A096LPK9 316 aa5.37□□□□□ -1.55
SSX1-201ENST00000376919 LOC102723532A0A0G2JNH3 316 aa5.37□□□□□ -1.55
SSX1-201ENST00000376919 A0A0J9YY10 115 aa5.37□□□□□ -1.55
SSX1-201ENST00000376919 IQANK1A0A1B0GTG1 560 aa5.37□□□□□ -1.55
SSX1-201ENST00000376919 NCF1BA6NI72 391 aaPredicted RBP5.37□□□□□ -1.55
SSX1-201ENST00000376919 SH2D7A6NKC9 451 aaPredicted RBP5.37□□□□□ -1.55
SSX1-201ENST00000376919 NCF1CA8MVU1 366 aaPredicted RBP5.37□□□□□ -1.55
SSX1-201ENST00000376919 ARHGEF33A8MVX0 844 aa5.37□□□□□ -1.55
SSX1-201ENST00000376919 SUPT3HB4E1H0 165 aa5.37□□□□□ -1.55
SSX1-201ENST00000376919 BTN3A3O00478 584 aa5.37□□□□□ -1.55
SSX1-201ENST00000376919 NTN3O00634 580 aaPredicted RBP5.37□□□□□ -1.55
SSX1-201ENST00000376919 CASC3O15234 703 aaKnown RBP5.37□□□□□ -1.55
SSX1-201ENST00000376919 RIPK2O43353 540 aa5.37□□□□□ -1.55
SSX1-201ENST00000376919 HOXA3O43365 443 aaPredicted RBP5.37□□□□□ -1.55
SSX1-201ENST00000376919 SUPT3HO75486 399 aa5.37□□□□□ -1.55
SSX1-201ENST00000376919 TNFSF15O95150 251 aa5.37□□□□□ -1.55
SSX1-201ENST00000376919 ABHD2P08910 425 aa5.37□□□□□ -1.55
SSX1-201ENST00000376919 CHRM5P08912 532 aaPredicted RBP5.37□□□□□ -1.55
SSX1-201ENST00000376919 SPARCP09486 303 aa5.37□□□□□ -1.55
SSX1-201ENST00000376919 CCDC166P0CW27 439 aa5.37□□□□□ -1.55
SSX1-201ENST00000376919 NCF1P14598 390 aaPredicted RBP5.37□□□□□ -1.55
SSX1-201ENST00000376919 UGT2B7P16662 529 aa5.37□□□□□ -1.55
SSX1-201ENST00000376919 ITIH1P19827 911 aa5.37□□□□□ -1.55
SSX1-201ENST00000376919 ACADLP28330 430 aa5.37□□□□□ -1.55
SSX1-201ENST00000376919 TNFRSF8P28908 595 aa5.37□□□□□ -1.55
SSX1-201ENST00000376919 EPHA3P29320 983 aa5.37□□□□□ -1.55
SSX1-201ENST00000376919 CRABP2P29373 138 aa5.37□□□□□ -1.55
SSX1-201ENST00000376919 TYK2P29597 1187 aa5.37□□□□□ -1.55
SSX1-201ENST00000376919 CMPK1P30085 196 aa5.37□□□□□ -1.55
SSX1-201ENST00000376919 PPIFP30405 207 aaKnown RBP5.37□□□□□ -1.55
SSX1-201ENST00000376919 PKLRP30613 574 aa5.37□□□□□ -1.55
SSX1-201ENST00000376919 CCKBRP32239 447 aa5.37□□□□□ -1.55
SSX1-201ENST00000376919 GSTM5P46439 218 aa5.37□□□□□ -1.55
SSX1-201ENST00000376919 KPNA2P52292 529 aaKnown RBP5.37□□□□□ -1.55
SSX1-201ENST00000376919 CDH15P55291 814 aa5.37□□□□□ -1.55
SSX1-201ENST00000376919 TAS2R39P59534 338 aa5.37□□□□□ -1.55
SSX1-201ENST00000376919 PPP1CAP62136 330 aa5.37□□□□□ -1.55
SSX1-201ENST00000376919 VSNL1P62760 191 aa5.37□□□□□ -1.55
SSX1-201ENST00000376919 TIAL1Q01085 375 aaKnown RBP eCLIP5.37□□□□□ -1.55
SSX1-201ENST00000376919 TUBB3Q13509 450 aa5.37□□□□□ -1.55
SSX1-201ENST00000376919 NFYCQ13952 458 aa5.37□□□□□ -1.55
SSX1-201ENST00000376919 E2F2Q14209 437 aa5.37□□□□□ -1.55
SSX1-201ENST00000376919 KIR2DS3Q14952 304 aa5.37□□□□□ -1.55
SSX1-201ENST00000376919 NAA25Q14CX7 972 aa5.37□□□□□ -1.55
SSX1-201ENST00000376919 ERCC6LQ2NKX8 1250 aa5.37□□□□□ -1.55
SSX1-201ENST00000376919 FAM153CQ494X1 144 aa5.37□□□□□ -1.55
SSX1-201ENST00000376919 DCAF12Q5T6F0 453 aa5.37□□□□□ -1.55
SSX1-201ENST00000376919 CMC1Q7Z7K0 106 aa5.37□□□□□ -1.55
SSX1-201ENST00000376919 ADAMTSL2Q86TH1 951 aa5.37□□□□□ -1.55
SSX1-201ENST00000376919 SLC15A3Q8IY34 581 aa5.37□□□□□ -1.55
SSX1-201ENST00000376919 OR4N4Q8N0Y3 316 aa5.37□□□□□ -1.55
SSX1-201ENST00000376919 LSMEM2Q8N112 164 aa5.37□□□□□ -1.55
SSX1-201ENST00000376919 EIF1ADQ8N9N8 165 aaKnown RBP5.37□□□□□ -1.55
SSX1-201ENST00000376919 PPFIBP2Q8ND30 876 aa5.37□□□□□ -1.55
SSX1-201ENST00000376919 OR9A1PQ8NGU1 263 aa5.37□□□□□ -1.55
SSX1-201ENST00000376919 RFWD2Q8NHY2 731 aa5.37□□□□□ -1.55
SSX1-201ENST00000376919 ATL1Q8WXF7 558 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms