RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 TFF2Q03403 129 aa20.56■□□□□ 0.88
RNF39-202ENST00000376751 EMX1Q04741 257 aaPredicted RBP20.56■□□□□ 0.88
RNF39-202ENST00000376751 TP53BP2Q13625 1128 aa20.56■□□□□ 0.88
RNF39-202ENST00000376751 PUM1Q14671 1186 aaKnown RBP eCLIP20.56■□□□□ 0.88
RNF39-202ENST00000376751 MICAQ29983 383 aa20.56■□□□□ 0.88
RNF39-202ENST00000376751 TOR1AIP1Q5JTV8 583 aa20.56■□□□□ 0.88
RNF39-202ENST00000376751 ENTHD1Q8IYW4 607 aa20.56■□□□□ 0.88
RNF39-202ENST00000376751 CCL4L1Q8NHW4 92 aa20.56■□□□□ 0.88
RNF39-202ENST00000376751 PSMA8Q8TAA3 256 aa20.56■□□□□ 0.88
RNF39-202ENST00000376751 FKBP10Q96AY3 582 aa20.56■□□□□ 0.88
RNF39-202ENST00000376751 HRASLS5Q96KN8 279 aa20.56■□□□□ 0.88
RNF39-202ENST00000376751 AMDHD1Q96NU7 426 aa20.56■□□□□ 0.88
RNF39-202ENST00000376751 KIR3DX1Q9H7L2 352 aa20.56■□□□□ 0.88
RNF39-202ENST00000376751 PCDHGA10Q9Y5H3 936 aa20.56■□□□□ 0.88
RNF39-202ENST00000376751 PCDH17O14917 1159 aa20.55■□□□□ 0.88
RNF39-202ENST00000376751 MAN1A2O60476 641 aa20.55■□□□□ 0.88
RNF39-202ENST00000376751 VIPP01282 170 aa20.55■□□□□ 0.88
RNF39-202ENST00000376751 ITGA2P17301 1181 aa20.55■□□□□ 0.88
RNF39-202ENST00000376751 HTR1BP28222 390 aa20.55■□□□□ 0.88
RNF39-202ENST00000376751 SLC19A1P41440 591 aa20.55■□□□□ 0.88
RNF39-202ENST00000376751 MASP1P48740 699 aa20.55■□□□□ 0.88
RNF39-202ENST00000376751 CCT3P49368 545 aaKnown RBP20.55■□□□□ 0.88
RNF39-202ENST00000376751 CXCR4P61073 352 aa20.55■□□□□ 0.88
RNF39-202ENST00000376751 ABATP80404 500 aa20.55■□□□□ 0.88
RNF39-202ENST00000376751 GANABQ14697 944 aaKnown RBP20.55■□□□□ 0.88
RNF39-202ENST00000376751 NPTX1Q15818 432 aa20.55■□□□□ 0.88
RNF39-202ENST00000376751 ENPP7Q6UWV6 458 aa20.55■□□□□ 0.88
RNF39-202ENST00000376751 MRGPRX1Q96LB2 322 aa20.55■□□□□ 0.88
RNF39-202ENST00000376751 PRDM7Q9NQW5 492 aa20.55■□□□□ 0.88
RNF39-202ENST00000376751 CLDND1Q9NY35 253 aa20.55■□□□□ 0.88
RNF39-202ENST00000376751 RNF6Q9Y252 685 aa20.55■□□□□ 0.88
RNF39-202ENST00000376751 ASB4Q9Y574 426 aa20.55■□□□□ 0.88
RNF39-202ENST00000376751 PRAMEF27A3QJZ7 478 aa20.55■□□□□ 0.88
RNF39-202ENST00000376751 C5orf58C9J3I9 102 aa20.55■□□□□ 0.88
RNF39-202ENST00000376751 FOXD2O60548 495 aaPredicted RBP20.55■□□□□ 0.88
RNF39-202ENST00000376751 NOL3O60936 208 aaKnown RBP20.55■□□□□ 0.88
RNF39-202ENST00000376751 MT-ND2P03891 347 aa20.55■□□□□ 0.88
RNF39-202ENST00000376751 ACSL1P33121 698 aa20.55■□□□□ 0.88
RNF39-202ENST00000376751 GRK3P35626 688 aa20.55■□□□□ 0.88
RNF39-202ENST00000376751 LTBRP36941 435 aa20.55■□□□□ 0.88
RNF39-202ENST00000376751 NFATC3Q12968 1075 aa20.55■□□□□ 0.88
RNF39-202ENST00000376751 ZNF425Q6IV72 752 aa20.55■□□□□ 0.88
RNF39-202ENST00000376751 ABHD17CQ6PCB6 329 aa20.55■□□□□ 0.88
RNF39-202ENST00000376751 SLC16A12Q6ZSM3 486 aa20.55■□□□□ 0.88
RNF39-202ENST00000376751 ASB12Q8WXK4 309 aa20.55■□□□□ 0.88
RNF39-202ENST00000376751 TANKQ92844 425 aa20.55■□□□□ 0.88
RNF39-202ENST00000376751 SLC35C2Q9NQQ7 365 aa20.55■□□□□ 0.88
RNF39-202ENST00000376751 RHCGQ9UBD6 479 aa20.55■□□□□ 0.88
RNF39-202ENST00000376751 APOBEC3BQ9UH17 382 aaKnown RBP20.55■□□□□ 0.88
RNF39-202ENST00000376751 TPRKBQ9Y3C4 175 aa20.55■□□□□ 0.88
RNF39-202ENST00000376751 PCDHGB1Q9Y5G3 927 aa20.55■□□□□ 0.88
RNF39-202ENST00000376751 PCDHGA4Q9Y5G9 962 aa20.55■□□□□ 0.88
RNF39-202ENST00000376751 PCDHGA2Q9Y5H1 932 aa20.55■□□□□ 0.88
RNF39-202ENST00000376751 PIAS3Q9Y6X2 628 aa20.55■□□□□ 0.88
RNF39-202ENST00000376751 A0A1W2PR48 441 aa20.54■□□□□ 0.88
RNF39-202ENST00000376751 MAN2B1O00754 1011 aa20.54■□□□□ 0.88
RNF39-202ENST00000376751 PGRMC2O15173 223 aa20.54■□□□□ 0.88
RNF39-202ENST00000376751 FAM20BO75063 409 aa20.54■□□□□ 0.88
RNF39-202ENST00000376751 CHRM5P08912 532 aaPredicted RBP20.54■□□□□ 0.88
RNF39-202ENST00000376751 DRD2P14416 443 aa20.54■□□□□ 0.88
RNF39-202ENST00000376751 DDX5P17844 614 aaKnown RBP20.54■□□□□ 0.88
RNF39-202ENST00000376751 HIST1H1TP22492 207 aaPredicted RBP20.54■□□□□ 0.88
RNF39-202ENST00000376751 ATP5A1P25705 553 aaKnown RBP20.54■□□□□ 0.88
RNF39-202ENST00000376751 HPCAP84074 193 aa20.54■□□□□ 0.88
RNF39-202ENST00000376751 DUSP2Q05923 314 aa20.54■□□□□ 0.88
RNF39-202ENST00000376751 SLAMF1Q13291 335 aa20.54■□□□□ 0.88
RNF39-202ENST00000376751 NFATC4Q14934 902 aa20.54■□□□□ 0.88
RNF39-202ENST00000376751 MLC1Q15049 377 aa20.54■□□□□ 0.88
RNF39-202ENST00000376751 ZNF750Q32MQ0 723 aa20.54■□□□□ 0.88
RNF39-202ENST00000376751 MRM1Q6IN84 353 aaKnown RBP20.54■□□□□ 0.88
RNF39-202ENST00000376751 KIAA1324Q6UXG2 1013 aaKnown RBP20.54■□□□□ 0.88
RNF39-202ENST00000376751 RD3Q7Z3Z2 195 aa20.54■□□□□ 0.88
RNF39-202ENST00000376751 OR4E2Q8NGC2 313 aa20.54■□□□□ 0.88
RNF39-202ENST00000376751 TSACCQ96A04 125 aaPredicted RBP20.54■□□□□ 0.88
RNF39-202ENST00000376751 FUNDC2Q9BWH2 189 aa20.54■□□□□ 0.88
RNF39-202ENST00000376751 ATG4BQ9Y4P1 393 aa20.54■□□□□ 0.88
RNF39-202ENST00000376751 FANCMQ8IYD8 2048 aa20.54■□□□□ 0.88
RNF39-202ENST00000376751 A0A1W2PS29 197 aa20.54■□□□□ 0.88
RNF39-202ENST00000376751 FFAR1O14842 300 aa20.54■□□□□ 0.88
RNF39-202ENST00000376751 MFN2O95140 757 aa20.54■□□□□ 0.88
RNF39-202ENST00000376751 HOXC4P09017 264 aaPredicted RBP20.54■□□□□ 0.88
RNF39-202ENST00000376751 AHRP35869 848 aa20.54■□□□□ 0.88
RNF39-202ENST00000376751 GGT2P36268 569 aa20.54■□□□□ 0.88
RNF39-202ENST00000376751 PXNP49023 591 aaPredicted RBP20.54■□□□□ 0.88
RNF39-202ENST00000376751 LIM2P55344 173 aa20.54■□□□□ 0.88
RNF39-202ENST00000376751 USP30Q70CQ3 517 aa20.54■□□□□ 0.88
RNF39-202ENST00000376751 ACOT4Q8N9L9 421 aa20.54■□□□□ 0.88
RNF39-202ENST00000376751 BMFQ96LC9 184 aa20.54■□□□□ 0.88
RNF39-202ENST00000376751 SARGQ9BW04 601 aa20.54■□□□□ 0.88
RNF39-202ENST00000376751 EHD3Q9NZN3 535 aa20.54■□□□□ 0.88
RNF39-202ENST00000376751 ZNF624Q9P2J8 865 aaPredicted RBP20.54■□□□□ 0.88
RNF39-202ENST00000376751 WARS2Q9UGM6 360 aaKnown RBP20.54■□□□□ 0.88
RNF39-202ENST00000376751 SCML1Q9UN30 329 aa20.54■□□□□ 0.88
RNF39-202ENST00000376751 HEBP2Q9Y5Z4 205 aa20.54■□□□□ 0.88
RNF39-202ENST00000376751 ZNF99A8MXY4 864 aaPredicted RBP20.53■□□□□ 0.88
RNF39-202ENST00000376751 ISM1B1AKI9 464 aa20.53■□□□□ 0.88
RNF39-202ENST00000376751 NARSO43776 548 aaKnown RBP20.53■□□□□ 0.88
RNF39-202ENST00000376751 SH3BP5O60239 455 aa20.53■□□□□ 0.88
RNF39-202ENST00000376751 IFNW1P05000 195 aa20.53■□□□□ 0.88
RNF39-202ENST00000376751 ALPPL2P10696 532 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms