RNA–Protein interactions for RNA: ENST00000376618.6

CPT1A-202, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 1 (best) BASIC

Gene CPT1A, Length 2,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-202ENST00000376618 MS4A8Q9BY19 250 aa13.31□□□□□ -0.28
CPT1A-202ENST00000376618 OR51E2Q9H255 320 aa13.31□□□□□ -0.28
CPT1A-202ENST00000376618 MVB12BQ9H7P6 319 aa13.31□□□□□ -0.28
CPT1A-202ENST00000376618 NMNAT1Q9HAN9 279 aaPredicted RBP13.31□□□□□ -0.28
CPT1A-202ENST00000376618 TRPC4Q9UBN4 977 aa13.31□□□□□ -0.28
CPT1A-202ENST00000376618 GPR34Q9UPC5 381 aa13.31□□□□□ -0.28
CPT1A-202ENST00000376618 TMEM247A6NEH6 219 aa13.31□□□□□ -0.28
CPT1A-202ENST00000376618 HMGN4O00479 90 aa13.31□□□□□ -0.28
CPT1A-202ENST00000376618 SLC35G4P0C7Q5 338 aa13.31□□□□□ -0.28
CPT1A-202ENST00000376618 JUNDP17535 347 aa13.31□□□□□ -0.28
CPT1A-202ENST00000376618 GADD45AP24522 165 aa13.31□□□□□ -0.28
CPT1A-202ENST00000376618 ACVR2AP27037 513 aa13.31□□□□□ -0.28
CPT1A-202ENST00000376618 TGFBR2P37173 567 aa13.31□□□□□ -0.28
CPT1A-202ENST00000376618 MADCAM1Q13477 382 aa13.31□□□□□ -0.28
CPT1A-202ENST00000376618 TUBA3CQ13748 450 aa13.31□□□□□ -0.28
CPT1A-202ENST00000376618 PDGFRLQ15198 375 aa13.31□□□□□ -0.28
CPT1A-202ENST00000376618 PROX2Q3B8N5 592 aa13.31□□□□□ -0.28
CPT1A-202ENST00000376618 TRIM40Q6P9F5 258 aa13.31□□□□□ -0.28
CPT1A-202ENST00000376618 TMEFF1Q8IYR6 380 aa13.31□□□□□ -0.28
CPT1A-202ENST00000376618 ZNF513Q8N8E2 541 aaPredicted RBP13.31□□□□□ -0.28
CPT1A-202ENST00000376618 GOT1L1Q8NHS2 421 aaPredicted RBP13.31□□□□□ -0.28
CPT1A-202ENST00000376618 YIPF6Q96EC8 236 aa13.31□□□□□ -0.28
CPT1A-202ENST00000376618 WDR34Q96EX3 536 aa13.31□□□□□ -0.28
CPT1A-202ENST00000376618 C16orf58Q96GQ5 468 aa13.31□□□□□ -0.28
CPT1A-202ENST00000376618 COL21A1Q96P44 957 aa13.31□□□□□ -0.28
CPT1A-202ENST00000376618 ALPK1Q96QP1 1244 aa13.31□□□□□ -0.28
CPT1A-202ENST00000376618 NLNQ9BYT8 704 aa13.31□□□□□ -0.28
CPT1A-202ENST00000376618 SIRT3Q9NTG7 399 aaPredicted RBP13.31□□□□□ -0.28
CPT1A-202ENST00000376618 TBC1D23Q9NUY8 699 aa13.31□□□□□ -0.28
CPT1A-202ENST00000376618 CKMT1AP12532 417 aa13.3□□□□□ -0.28
CPT1A-202ENST00000376618 DDCP20711 480 aa13.3□□□□□ -0.28
CPT1A-202ENST00000376618 CNR2P34972 360 aa13.3□□□□□ -0.28
CPT1A-202ENST00000376618 ST3GAL4Q11206 333 aa13.3□□□□□ -0.28
CPT1A-202ENST00000376618 KRT33BQ14525 404 aa13.3□□□□□ -0.28
CPT1A-202ENST00000376618 TEAD4Q15561 434 aa13.3□□□□□ -0.28
CPT1A-202ENST00000376618 TMEM52BQ4KMG9 183 aa13.3□□□□□ -0.28
CPT1A-202ENST00000376618 DCDC5Q6ZRR9 648 aa13.3□□□□□ -0.28
CPT1A-202ENST00000376618 UTS2BQ765I0 119 aa13.3□□□□□ -0.28
CPT1A-202ENST00000376618 LINC00615Q96LM1 132 aaPredicted RBP13.3□□□□□ -0.28
CPT1A-202ENST00000376618 MAGEB10Q96LZ2 347 aaPredicted RBP13.3□□□□□ -0.28
CPT1A-202ENST00000376618 DPH7Q9BTV6 452 aa13.3□□□□□ -0.28
CPT1A-202ENST00000376618 WDR26Q9H7D7 661 aa13.3□□□□□ -0.28
CPT1A-202ENST00000376618 TMEM9Q9P0T7 183 aa13.3□□□□□ -0.28
CPT1A-202ENST00000376618 TDRD6O60522 2096 aaKnown RBP13.3□□□□□ -0.28
CPT1A-202ENST00000376618 PNMA8CA0A1B0GUJ8 204 aa13.3□□□□□ -0.28
CPT1A-202ENST00000376618 C17orf113A0A1B0GUU1 675 aa13.3□□□□□ -0.28
CPT1A-202ENST00000376618 KLHL33A6NCF5 533 aa13.3□□□□□ -0.28
CPT1A-202ENST00000376618 POM121BA6NF01 834 aa13.3□□□□□ -0.28
CPT1A-202ENST00000376618 DBTP11182 482 aaKnown RBP13.3□□□□□ -0.28
CPT1A-202ENST00000376618 BMP4P12644 408 aa13.3□□□□□ -0.28
CPT1A-202ENST00000376618 BCL6P41182 706 aa13.3□□□□□ -0.28
CPT1A-202ENST00000376618 XCR1P46094 333 aa13.3□□□□□ -0.28
CPT1A-202ENST00000376618 CSNK1G2P78368 415 aa13.3□□□□□ -0.28
CPT1A-202ENST00000376618 TOP3AQ13472 1001 aaPredicted RBP13.3□□□□□ -0.28
CPT1A-202ENST00000376618 NDUFAF5Q5TEU4 345 aa13.3□□□□□ -0.28
CPT1A-202ENST00000376618 Q6ZNX1 250 aa13.3□□□□□ -0.28
CPT1A-202ENST00000376618 KLHDC8AQ8IYD2 350 aa13.3□□□□□ -0.28
CPT1A-202ENST00000376618 KRT78Q8N1N4 520 aa13.3□□□□□ -0.28
CPT1A-202ENST00000376618 B3GNT7Q8NFL0 401 aa13.3□□□□□ -0.28
CPT1A-202ENST00000376618 OR2A1Q8NGT9 310 aa13.3□□□□□ -0.28
CPT1A-202ENST00000376618 BORCS5Q969J3 196 aa13.3□□□□□ -0.28
CPT1A-202ENST00000376618 MYADMQ96S97 322 aa13.3□□□□□ -0.28
CPT1A-202ENST00000376618 BTBD2Q9BX70 525 aa13.3□□□□□ -0.28
CPT1A-202ENST00000376618 TMEM74BQ9NUR3 256 aa13.3□□□□□ -0.28
CPT1A-202ENST00000376618 IRAK4Q9NWZ3 460 aa13.3□□□□□ -0.28
CPT1A-202ENST00000376618 LMCD1Q9NZU5 365 aa13.3□□□□□ -0.28
CPT1A-202ENST00000376618 THAP10Q9P2Z0 257 aaPredicted RBP13.3□□□□□ -0.28
CPT1A-202ENST00000376618 FAM32AQ9Y421 112 aaKnown RBP13.3□□□□□ -0.28
CPT1A-202ENST00000376618 CACNA1IQ9P0X4 2223 aa13.3□□□□□ -0.28
CPT1A-202ENST00000376618 OR2A25A4D2G3 310 aa13.29□□□□□ -0.28
CPT1A-202ENST00000376618 HAT1O14929 419 aa13.29□□□□□ -0.28
CPT1A-202ENST00000376618 PDPK1O15530 556 aa13.29□□□□□ -0.28
CPT1A-202ENST00000376618 VEGFDO43915 354 aa13.29□□□□□ -0.28
CPT1A-202ENST00000376618 CHMP24386 653 aa13.29□□□□□ -0.28
CPT1A-202ENST00000376618 GGT2P36268 569 aa13.29□□□□□ -0.28
CPT1A-202ENST00000376618 PIK3CBP42338 1070 aa13.29□□□□□ -0.28
CPT1A-202ENST00000376618 ST13P50502 369 aaKnown RBP13.29□□□□□ -0.28
CPT1A-202ENST00000376618 PCBP3P57721 371 aaKnown RBP13.29□□□□□ -0.28
CPT1A-202ENST00000376618 PCDH1Q08174 1060 aa13.29□□□□□ -0.28
CPT1A-202ENST00000376618 TPRG1LQ5T0D9 272 aa13.29□□□□□ -0.28
CPT1A-202ENST00000376618 TCTN3Q6NUS6 607 aa13.29□□□□□ -0.28
CPT1A-202ENST00000376618 LCTLQ6UWM7 567 aa13.29□□□□□ -0.28
CPT1A-202ENST00000376618 TAGAPQ8N103 731 aa13.29□□□□□ -0.28
CPT1A-202ENST00000376618 CPA6Q8N4T0 437 aa13.29□□□□□ -0.28
CPT1A-202ENST00000376618 OXR1Q8N573 874 aa13.29□□□□□ -0.28
CPT1A-202ENST00000376618 FBXO15Q8NCQ5 510 aaPredicted RBP13.29□□□□□ -0.28
CPT1A-202ENST00000376618 RNF217Q8TC41 542 aa13.29□□□□□ -0.28
CPT1A-202ENST00000376618 LZICQ8WZA0 190 aa13.29□□□□□ -0.28
CPT1A-202ENST00000376618 ZNF566Q969W8 418 aa13.29□□□□□ -0.28
CPT1A-202ENST00000376618 ARMC5Q96C12 935 aa13.29□□□□□ -0.28
CPT1A-202ENST00000376618 CENPOQ9BU64 300 aa13.29□□□□□ -0.28
CPT1A-202ENST00000376618 FBXL12Q9NXK8 326 aa13.29□□□□□ -0.28
CPT1A-202ENST00000376618 DNAJC27Q9NZQ0 273 aa13.29□□□□□ -0.28
CPT1A-202ENST00000376618 DUSP12Q9UNI6 340 aa13.29□□□□□ -0.28
CPT1A-202ENST00000376618 ATG4BQ9Y4P1 393 aa13.29□□□□□ -0.28
CPT1A-202ENST00000376618 COL4A3Q01955 1670 aa13.29□□□□□ -0.28
CPT1A-202ENST00000376618 FREM2Q5SZK8 3169 aa13.29□□□□□ -0.28
CPT1A-202ENST00000376618 C5orf58C9J3I9 102 aa13.29□□□□□ -0.28
CPT1A-202ENST00000376618 C1QTNF3-AMACRE9PGA6 284 aa13.29□□□□□ -0.28
CPT1A-202ENST00000376618 WWP2O00308 870 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms