RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 PRAMEF13Q5VWM6 474 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 CD300LDQ6UXZ3 194 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 TMIEQ8NEW7 156 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 HTRA1Q92743 480 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 SLC6A18Q96N87 628 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 CTRCQ99895 268 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 MENTQ9BUN1 341 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 MS4A8Q9BY19 250 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 PELI2Q9HAT8 420 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 LHX9Q9NQ69 397 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 FBXL12Q9NXK8 326 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 RHCGQ9UBD6 479 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 HCFC2Q9Y5Z7 792 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 TLR4O00206 839 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 HMGN4O00479 90 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 FAAHO00519 579 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 VEGFDO43915 354 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 ITGB7P26010 798 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 CRYBB2P43320 205 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 GSTM5P46439 218 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 METAP1P53582 386 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 TPTEP56180 551 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 CYP4F2P78329 520 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 MED22Q15528 200 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 ARHGAP15Q53QZ3 475 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 RPS26P11Q5JNZ5 115 aaPredicted RBP10.14□□□□□ -0.79
ABCF1-202ENST00000376545 C6orf183Q5T699 404 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 KHDRBS2Q5VWX1 349 aaKnown RBP10.14□□□□□ -0.79
ABCF1-202ENST00000376545 DESI1Q6ICB0 168 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 KRT78Q8N1N4 520 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 ANKRD53Q8N9V6 530 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 FLCNQ8NFG4 579 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 IL17RDQ8NFM7 739 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 OR4D11Q8NGI4 311 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 NUS1Q96E22 293 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 ZNF354BQ96LW1 612 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 KLHL25Q9H0H3 589 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 NT5DC2Q9H857 520 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 NEUROD4Q9HD90 331 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 WASH6PQ9NQA3 447 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 MIEF1Q9NQG6 463 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 AHSPQ9NZD4 102 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 NPAP1Q9NZP6 1156 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 SLC27A6Q9Y2P4 619 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 WNT6Q9Y6F9 365 aa10.14□□□□□ -0.79
ABCF1-202ENST00000376545 TCF20Q9UGU0 1960 aaKnown RBP10.14□□□□□ -0.79
ABCF1-202ENST00000376545 MMP20O60882 483 aa10.13□□□□□ -0.79
ABCF1-202ENST00000376545 POP7O75817 140 aaKnown RBP10.13□□□□□ -0.79
ABCF1-202ENST00000376545 DNTTP04053 509 aa10.13□□□□□ -0.79
ABCF1-202ENST00000376545 SOAT1P35610 550 aa10.13□□□□□ -0.79
ABCF1-202ENST00000376545 SEPHS1P49903 392 aa10.13□□□□□ -0.79
ABCF1-202ENST00000376545 RPA4Q13156 261 aa10.13□□□□□ -0.79
ABCF1-202ENST00000376545 POM121L1PQ3SYA9 428 aa10.13□□□□□ -0.79
ABCF1-202ENST00000376545 SMUG1Q53HV7 270 aa10.13□□□□□ -0.79
ABCF1-202ENST00000376545 FAM83HQ6ZRV2 1179 aaPredicted RBP10.13□□□□□ -0.79
ABCF1-202ENST00000376545 TRAPPC5Q8IUR0 188 aa10.13□□□□□ -0.79
ABCF1-202ENST00000376545 NANOGP1Q8N7R0 232 aa10.13□□□□□ -0.79
ABCF1-202ENST00000376545 WFIKKN2Q8TEU8 576 aa10.13□□□□□ -0.79
ABCF1-202ENST00000376545 TMEM19Q96HH6 336 aa10.13□□□□□ -0.79
ABCF1-202ENST00000376545 WDFY2Q96P53 400 aa10.13□□□□□ -0.79
ABCF1-202ENST00000376545 YME1L1Q96TA2 773 aa10.13□□□□□ -0.79
ABCF1-202ENST00000376545 HOXD1Q9GZZ0 328 aa10.13□□□□□ -0.79
ABCF1-202ENST00000376545 PCYT1BQ9Y5K3 369 aaPredicted RBP10.13□□□□□ -0.79
ABCF1-202ENST00000376545 FAM227AF5H4B4 570 aa10.13□□□□□ -0.79
ABCF1-202ENST00000376545 SNPHO15079 494 aa10.13□□□□□ -0.79
ABCF1-202ENST00000376545 EFCAB14O75071 495 aa10.13□□□□□ -0.79
ABCF1-202ENST00000376545 FKTNO75072 461 aa10.13□□□□□ -0.79
ABCF1-202ENST00000376545 CSO75390 466 aaKnown RBP10.13□□□□□ -0.79
ABCF1-202ENST00000376545 PDE9AO76083 593 aa10.13□□□□□ -0.79
ABCF1-202ENST00000376545 PRNPP04156 253 aa10.13□□□□□ -0.79
ABCF1-202ENST00000376545 RHOP08100 348 aa10.13□□□□□ -0.79
ABCF1-202ENST00000376545 HSMCR30P0CW71 290 aa10.13□□□□□ -0.79
ABCF1-202ENST00000376545 CD72P21854 359 aa10.13□□□□□ -0.79
ABCF1-202ENST00000376545 NFE2L1Q14494 772 aa10.13□□□□□ -0.79
ABCF1-202ENST00000376545 ARHGAP19Q14CB8 494 aa10.13□□□□□ -0.79
ABCF1-202ENST00000376545 DEFB115Q30KQ5 88 aa10.13□□□□□ -0.79
ABCF1-202ENST00000376545 LEXMQ3ZCV2 418 aa10.13□□□□□ -0.79
ABCF1-202ENST00000376545 TMEM52BQ4KMG9 183 aa10.13□□□□□ -0.79
ABCF1-202ENST00000376545 PGBD2Q6P3X8 592 aa10.13□□□□□ -0.79
ABCF1-202ENST00000376545 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.13□□□□□ -0.79
ABCF1-202ENST00000376545 WDR53Q7Z5U6 358 aaPredicted RBP10.13□□□□□ -0.79
ABCF1-202ENST00000376545 AKAP14Q86UN6 197 aa10.13□□□□□ -0.79
ABCF1-202ENST00000376545 PDZD3Q86UT5 571 aa10.13□□□□□ -0.79
ABCF1-202ENST00000376545 WDR36Q8NI36 951 aaKnown RBP10.13□□□□□ -0.79
ABCF1-202ENST00000376545 ZNF296Q8WUU4 475 aaPredicted RBP10.13□□□□□ -0.79
ABCF1-202ENST00000376545 KLHL6Q8WZ60 621 aa10.13□□□□□ -0.79
ABCF1-202ENST00000376545 RAD51AP1Q96B01 352 aa10.13□□□□□ -0.79
ABCF1-202ENST00000376545 ARRDC3Q96B67 414 aa10.13□□□□□ -0.79
ABCF1-202ENST00000376545 TMEM80Q96HE8 168 aa10.13□□□□□ -0.79
ABCF1-202ENST00000376545 COX14Q96I36 57 aa10.13□□□□□ -0.79
ABCF1-202ENST00000376545 ZSWIM3Q96MP5 696 aa10.13□□□□□ -0.79
ABCF1-202ENST00000376545 BARHL1Q9BZE3 327 aa10.13□□□□□ -0.79
ABCF1-202ENST00000376545 PITHD1Q9GZP4 211 aaPredicted RBP10.13□□□□□ -0.79
ABCF1-202ENST00000376545 TAS2R7Q9NYW3 318 aa10.13□□□□□ -0.79
ABCF1-202ENST00000376545 EHD3Q9NZN3 535 aa10.13□□□□□ -0.79
ABCF1-202ENST00000376545 PRAMEF27A3QJZ7 478 aa10.13□□□□□ -0.79
ABCF1-202ENST00000376545 BCHEP06276 602 aa10.13□□□□□ -0.79
ABCF1-202ENST00000376545 KELP23276 732 aa10.13□□□□□ -0.79
ABCF1-202ENST00000376545 CASP3P42574 277 aa10.13□□□□□ -0.79
ABCF1-202ENST00000376545 ARHGEF6Q15052 776 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms