RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 C12orf66Q96MD2 445 aa13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 NLKQ9UBE8 527 aa13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 SLC30A4O14863 429 aa13.71□□□□□ -0.21
TNFRSF1B-201ENST00000376259 PPM1DO15297 605 aa13.71□□□□□ -0.21
TNFRSF1B-201ENST00000376259 SLC31A1O15431 190 aa13.71□□□□□ -0.21
TNFRSF1B-201ENST00000376259 PDE9AO76083 593 aa13.71□□□□□ -0.21
TNFRSF1B-201ENST00000376259 SDC2P34741 201 aa13.71□□□□□ -0.21
TNFRSF1B-201ENST00000376259 CAMK1Q14012 370 aa13.71□□□□□ -0.21
TNFRSF1B-201ENST00000376259 TPGS2Q68CL5 300 aa13.71□□□□□ -0.21
TNFRSF1B-201ENST00000376259 PLEKHM3Q6ZWE6 761 aa13.71□□□□□ -0.21
TNFRSF1B-201ENST00000376259 OR4N5Q8IXE1 308 aa13.71□□□□□ -0.21
TNFRSF1B-201ENST00000376259 CLIP3Q96DZ5 547 aa13.71□□□□□ -0.21
TNFRSF1B-201ENST00000376259 COQ7Q99807 217 aa13.71□□□□□ -0.21
TNFRSF1B-201ENST00000376259 EFCAB11Q9BUY7 163 aa13.71□□□□□ -0.21
TNFRSF1B-201ENST00000376259 KLHL28Q9NXS3 571 aa13.71□□□□□ -0.21
TNFRSF1B-201ENST00000376259 SPATA7Q9P0W8 599 aa13.71□□□□□ -0.21
TNFRSF1B-201ENST00000376259 IL36AQ9UHA7 158 aa13.71□□□□□ -0.21
TNFRSF1B-201ENST00000376259 PCDHGA4Q9Y5G9 962 aa13.71□□□□□ -0.21
TNFRSF1B-201ENST00000376259 FAM183AA6NL82 134 aa13.71□□□□□ -0.21
TNFRSF1B-201ENST00000376259 MRPL3P09001 348 aaKnown RBP13.71□□□□□ -0.21
TNFRSF1B-201ENST00000376259 CPN2P22792 545 aa13.71□□□□□ -0.21
TNFRSF1B-201ENST00000376259 VIPR2P41587 438 aa13.71□□□□□ -0.21
TNFRSF1B-201ENST00000376259 CAP1Q01518 475 aa13.71□□□□□ -0.21
TNFRSF1B-201ENST00000376259 PCDH1Q08174 1060 aa13.71□□□□□ -0.21
TNFRSF1B-201ENST00000376259 MRPL58Q14197 206 aaKnown RBP13.71□□□□□ -0.21
TNFRSF1B-201ENST00000376259 ZNF750Q32MQ0 723 aa13.71□□□□□ -0.21
TNFRSF1B-201ENST00000376259 BRAT1Q6PJG6 821 aa13.71□□□□□ -0.21
TNFRSF1B-201ENST00000376259 GDPD3Q7L5L3 318 aa13.71□□□□□ -0.21
TNFRSF1B-201ENST00000376259 C10orf53Q8N6V4 93 aa13.71□□□□□ -0.21
TNFRSF1B-201ENST00000376259 OR9A1PQ8NGU1 263 aa13.71□□□□□ -0.21
TNFRSF1B-201ENST00000376259 BTN2A2Q8WVV5 523 aa13.71□□□□□ -0.21
TNFRSF1B-201ENST00000376259 IRF7Q92985 503 aa13.71□□□□□ -0.21
TNFRSF1B-201ENST00000376259 TIFAQ96CG3 184 aa13.71□□□□□ -0.21
TNFRSF1B-201ENST00000376259 ZNF486Q96H40 463 aaPredicted RBP13.71□□□□□ -0.21
TNFRSF1B-201ENST00000376259 HRASLS5Q96KN8 279 aa13.71□□□□□ -0.21
TNFRSF1B-201ENST00000376259 TEFMQ96QE5 360 aaKnown RBP13.71□□□□□ -0.21
TNFRSF1B-201ENST00000376259 ZSCAN5AQ9BUG6 496 aa13.71□□□□□ -0.21
TNFRSF1B-201ENST00000376259 GTF2A1LQ9UNN4 478 aa13.71□□□□□ -0.21
TNFRSF1B-201ENST00000376259 ENPP4Q9Y6X5 453 aa13.71□□□□□ -0.21
TNFRSF1B-201ENST00000376259 TRAV6A0A075B6T7 132 aa13.71□□□□□ -0.22
TNFRSF1B-201ENST00000376259 GRXCR2A6NFK2 248 aa13.71□□□□□ -0.22
TNFRSF1B-201ENST00000376259 ZNF860A6NHJ4 632 aa13.71□□□□□ -0.22
TNFRSF1B-201ENST00000376259 NUAK1O60285 661 aa13.71□□□□□ -0.22
TNFRSF1B-201ENST00000376259 FZD6O60353 706 aa13.71□□□□□ -0.22
TNFRSF1B-201ENST00000376259 PAK4O96013 591 aaPredicted RBP13.71□□□□□ -0.22
TNFRSF1B-201ENST00000376259 KCNJ10P78508 379 aa13.71□□□□□ -0.22
TNFRSF1B-201ENST00000376259 LRIF1Q5T3J3 769 aa13.71□□□□□ -0.22
TNFRSF1B-201ENST00000376259 HORMAD2Q8N7B1 307 aa13.71□□□□□ -0.22
TNFRSF1B-201ENST00000376259 OR10H4Q8NGA5 316 aa13.71□□□□□ -0.22
TNFRSF1B-201ENST00000376259 OR4K3Q96R72 315 aa13.71□□□□□ -0.22
TNFRSF1B-201ENST00000376259 SPNS1Q9H2V7 528 aa13.71□□□□□ -0.22
TNFRSF1B-201ENST00000376259 SERHL2Q9H4I8 314 aa13.71□□□□□ -0.22
TNFRSF1B-201ENST00000376259 IGFLR1Q9H665 355 aa13.71□□□□□ -0.22
TNFRSF1B-201ENST00000376259 RDH14Q9HBH5 336 aa13.71□□□□□ -0.22
TNFRSF1B-201ENST00000376259 CUEDC1Q9NWM3 386 aaPredicted RBP13.71□□□□□ -0.22
TNFRSF1B-201ENST00000376259 RPL36Q9Y3U8 105 aaKnown RBP13.71□□□□□ -0.22
TNFRSF1B-201ENST00000376259 METTL15A6NJ78 407 aa13.7□□□□□ -0.22
TNFRSF1B-201ENST00000376259 M0R082 166 aa13.7□□□□□ -0.22
TNFRSF1B-201ENST00000376259 CYP17A1P05093 508 aa13.7□□□□□ -0.22
TNFRSF1B-201ENST00000376259 INHBBP09529 407 aa13.7□□□□□ -0.22
TNFRSF1B-201ENST00000376259 SLC2A2P11168 524 aaPredicted RBP13.7□□□□□ -0.22
TNFRSF1B-201ENST00000376259 CSF2RAP15509 400 aa13.7□□□□□ -0.22
TNFRSF1B-201ENST00000376259 ZNF8P17098 575 aaPredicted RBP13.7□□□□□ -0.22
TNFRSF1B-201ENST00000376259 CTNNB1P35222 781 aa13.7□□□□□ -0.22
TNFRSF1B-201ENST00000376259 ZNF45Q02386 682 aa13.7□□□□□ -0.22
TNFRSF1B-201ENST00000376259 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.7□□□□□ -0.22
TNFRSF1B-201ENST00000376259 AMZ2Q86W34 360 aa13.7□□□□□ -0.22
TNFRSF1B-201ENST00000376259 NLGN4YQ8NFZ3 816 aaPredicted RBP13.7□□□□□ -0.22
TNFRSF1B-201ENST00000376259 FIBINQ8TAL6 211 aa13.7□□□□□ -0.22
TNFRSF1B-201ENST00000376259 PIK3R3Q92569 461 aa13.7□□□□□ -0.22
TNFRSF1B-201ENST00000376259 TMCO6Q96DC7 493 aa13.7□□□□□ -0.22
TNFRSF1B-201ENST00000376259 C11orf24Q96F05 449 aaPredicted RBP13.7□□□□□ -0.22
TNFRSF1B-201ENST00000376259 TMEM80Q96HE8 168 aa13.7□□□□□ -0.22
TNFRSF1B-201ENST00000376259 SLC38A2Q96QD8 506 aa13.7□□□□□ -0.22
TNFRSF1B-201ENST00000376259 CDADC1Q9BWV3 514 aa13.7□□□□□ -0.22
TNFRSF1B-201ENST00000376259 TTLL2Q9BWV7 592 aa13.7□□□□□ -0.22
TNFRSF1B-201ENST00000376259 SPRTNQ9H040 489 aaPredicted RBP13.7□□□□□ -0.22
TNFRSF1B-201ENST00000376259 ADAP2Q9NPF8 381 aa13.7□□□□□ -0.22
TNFRSF1B-201ENST00000376259 SH2B3Q9UQQ2 575 aa13.7□□□□□ -0.22
TNFRSF1B-201ENST00000376259 HSPB11Q9Y547 144 aa13.7□□□□□ -0.22
TNFRSF1B-201ENST00000376259 DOCK6Q96HP0 2047 aa13.7□□□□□ -0.22
TNFRSF1B-201ENST00000376259 PLD2O14939 933 aa13.7□□□□□ -0.22
TNFRSF1B-201ENST00000376259 PI15O43692 258 aa13.7□□□□□ -0.22
TNFRSF1B-201ENST00000376259 RPS19P39019 145 aaKnown RBP13.7□□□□□ -0.22
TNFRSF1B-201ENST00000376259 GPR4P46093 362 aa13.7□□□□□ -0.22
TNFRSF1B-201ENST00000376259 COX10Q12887 443 aa13.7□□□□□ -0.22
TNFRSF1B-201ENST00000376259 GPR68Q15743 365 aa13.7□□□□□ -0.22
TNFRSF1B-201ENST00000376259 LRRC26Q2I0M4 334 aa13.7□□□□□ -0.22
TNFRSF1B-201ENST00000376259 ZXDCQ2QGD7 858 aaPredicted RBP13.7□□□□□ -0.22
TNFRSF1B-201ENST00000376259 AGAP7PQ5VUJ5 663 aa13.7□□□□□ -0.22
TNFRSF1B-201ENST00000376259 SLC30A6Q6NXT4 461 aa13.7□□□□□ -0.22
TNFRSF1B-201ENST00000376259 ARL9Q6T311 187 aa13.7□□□□□ -0.22
TNFRSF1B-201ENST00000376259 SLC46A3Q7Z3Q1 461 aa13.7□□□□□ -0.22
TNFRSF1B-201ENST00000376259 OR4K5Q8NGD3 323 aa13.7□□□□□ -0.22
TNFRSF1B-201ENST00000376259 OR52N2Q8NGI0 321 aa13.7□□□□□ -0.22
TNFRSF1B-201ENST00000376259 POF1BQ8WVV4 589 aa13.7□□□□□ -0.22
TNFRSF1B-201ENST00000376259 GAL3ST1Q99999 423 aa13.7□□□□□ -0.22
TNFRSF1B-201ENST00000376259 TM7SF3Q9NS93 570 aa13.7□□□□□ -0.22
TNFRSF1B-201ENST00000376259 B3GNT3Q9Y2A9 372 aa13.7□□□□□ -0.22
TNFRSF1B-201ENST00000376259 SNTNA6NMZ2 147 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms