RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 OPRD1P41143 372 aa13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 CYP4F8P98187 520 aa13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 MEF2AQ02078 507 aaPredicted RBP13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 LRRC74AQ0VAA2 488 aa13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 CCDC58Q4VC31 144 aa13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 SPIN4Q56A73 249 aa13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 TMIGD1Q6UXZ0 262 aa13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 UBASH3BQ8TF42 649 aa13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 MYLIPQ8WY64 445 aa13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 SLC7A6Q92536 515 aa13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 RNF31Q96EP0 1072 aa13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 TMEM80Q96HE8 168 aa13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 SLC6A18Q96N87 628 aa13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 TMEM38AQ9H6F2 299 aa13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 HCFC1R1Q9NWW0 138 aa13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 REV1Q9UBZ9 1251 aa13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 ATP6V1HQ9UI12 483 aa13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 MAU2Q9Y6X3 613 aa13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 ANAPC1Q9H1A4 1944 aa13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 MPZL2O60487 215 aa13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 SEMA7AO75326 666 aa13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 KLHL18O94889 574 aa13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 AP2A2O94973 939 aa13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 IMPA1P29218 277 aa13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 EPHB3P54753 998 aa13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 TAS2R50P59544 299 aa13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 GALK2Q01415 458 aa13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 RBBP4Q09028 425 aa13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 FCHO2Q0JRZ9 810 aa13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 TRIM40Q6P9F5 258 aa13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 Q6ZNB5 142 aa13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 DPY19L3Q6ZPD9 716 aa13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 GAREM2Q75VX8 874 aa13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 NOXA1Q86UR1 476 aa13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 RBM45Q8IUH3 476 aaKnown RBP13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 TCEANCQ8N8B7 351 aa13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 CHST14Q8NCH0 376 aa13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 KREMEN2Q8NCW0 462 aa13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 GOT1L1Q8NHS2 421 aaPredicted RBP13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 PPCDCQ96CD2 204 aa13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 ECHDC3Q96DC8 303 aa13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 FZD3Q9NPG1 666 aa13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 SEC14L4Q9UDX3 406 aa13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 STUB1Q9UNE7 303 aa13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 YARS2Q9Y2Z4 477 aaKnown RBP13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 PCM1Q15154 2024 aa13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 A0A1W2PQL4 384 aaPredicted RBP13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 CCDC182A6NF36 153 aa13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 TSPAN6O43657 245 aa13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 SLCO2B1O94956 709 aa13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 C8AP07357 584 aa13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 GSTM1P09488 218 aa13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 CSF3P09919 207 aa13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 FURINP09958 794 aa13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 HSD3B1P14060 373 aa13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 HSD3B2P26439 372 aa13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 PCBP3P57721 371 aaKnown RBP13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 SNRPD1P62314 119 aaKnown RBP13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 ZNF33BQ06732 778 aa13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 SCN1BQ07699 218 aa13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 ZNF763Q0D2J5 394 aa13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 HNRNPA0Q13151 305 aaKnown RBP13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 VEPH1Q14D04 833 aa13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 C22orf42Q6IC83 251 aa13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 Q6ZVL8 140 aa13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 PHC2Q8IXK0 858 aa13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 OXR1Q8N573 874 aa13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 IQCF1Q8N6M8 205 aa13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 OR7G1Q8NGA0 311 aa13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 OR9Q1Q8NGQ5 310 aa13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 WFDC6Q9BQY6 131 aa13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 UCK2Q9BZX2 261 aa13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 IL21Q9HBE4 155 aa13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 SSR3Q9UNL2 185 aa13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 YBX2Q9Y2T7 364 aaKnown RBP13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 HYKKA2RU49 373 aa13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 FABP12A6NFH5 140 aa13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 B4DXG7 233 aa13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 CCL16O15467 120 aa13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 TPST2O60704 377 aa13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 GPR37L1O60883 481 aa13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 TMCC2O75069 709 aa13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 PSIP1O75475 530 aaKnown RBP13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 APOL3O95236 402 aa13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 PIPP12273 146 aaPredicted RBP13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 PDHA2P29803 388 aa13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 CTSCP53634 463 aa13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 ZNF91Q05481 1191 aa13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 GLYR1Q49A26 553 aaPredicted RBP13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 GPAT3Q53EU6 434 aa13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 ZNF697Q5TEC3 545 aa13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 PPP2R2DQ66LE6 453 aa13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 PAMR1Q6UXH9 720 aa13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 SLCO4C1Q6ZQN7 724 aa13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 HSD11B1LQ7Z5J1 315 aa13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 ABI3BPQ7Z7G0 1075 aa13.43□□□□□ -0.26
CLCNKA-202ENST00000375692 GLCCI1Q86VQ1 547 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms