RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 KLC3Q6P597 504 aa13.19□□□□□ -0.3
NELFE-201ENST00000375425 GPR180Q86V85 440 aa13.19□□□□□ -0.3
NELFE-201ENST00000375425 CD163Q86VB7 1156 aa13.19□□□□□ -0.3
NELFE-201ENST00000375425 EID3Q8N140 333 aa13.19□□□□□ -0.3
NELFE-201ENST00000375425 OR2M7Q8NG81 312 aa13.19□□□□□ -0.3
NELFE-201ENST00000375425 TANKQ92844 425 aa13.19□□□□□ -0.3
NELFE-201ENST00000375425 SCYL1Q96KG9 808 aa13.19□□□□□ -0.3
NELFE-201ENST00000375425 DGAT2Q96PD7 388 aa13.19□□□□□ -0.3
NELFE-201ENST00000375425 DMRT3Q9NQL9 472 aa13.19□□□□□ -0.3
NELFE-201ENST00000375425 NINJ2Q9NZG7 142 aa13.19□□□□□ -0.3
NELFE-201ENST00000375425 COPS7AQ9UBW8 275 aa13.19□□□□□ -0.3
NELFE-201ENST00000375425 PPT2Q9UMR5 302 aa13.19□□□□□ -0.3
NELFE-201ENST00000375425 TSC22D4Q9Y3Q8 395 aa13.19□□□□□ -0.3
NELFE-201ENST00000375425 ATG4BQ9Y4P1 393 aa13.19□□□□□ -0.3
NELFE-201ENST00000375425 A0A0G2JMM0 328 aa13.18□□□□□ -0.3
NELFE-201ENST00000375425 A0A1W2PPB8 328 aa13.18□□□□□ -0.3
NELFE-201ENST00000375425 A0A1W2PRS3 328 aa13.18□□□□□ -0.3
NELFE-201ENST00000375425 KIR3DP1A8MWS1 328 aa13.18□□□□□ -0.3
NELFE-201ENST00000375425 G3V3Y1 287 aa13.18□□□□□ -0.3
NELFE-201ENST00000375425 PROM1O43490 865 aa13.18□□□□□ -0.3
NELFE-201ENST00000375425 SIX3O95343 332 aaPredicted RBP13.18□□□□□ -0.3
NELFE-201ENST00000375425 CNR1P21554 472 aa13.18□□□□□ -0.3
NELFE-201ENST00000375425 TLX1P31314 330 aaPredicted RBP13.18□□□□□ -0.3
NELFE-201ENST00000375425 PTGER4P35408 488 aa13.18□□□□□ -0.3
NELFE-201ENST00000375425 SERPINB8P50452 374 aa13.18□□□□□ -0.3
NELFE-201ENST00000375425 PPIAP62937 165 aaKnown RBP13.18□□□□□ -0.3
NELFE-201ENST00000375425 IGLV3-21P80748 117 aaPredicted RBP13.18□□□□□ -0.3
NELFE-201ENST00000375425 PLGLB1Q02325 96 aa13.18□□□□□ -0.3
NELFE-201ENST00000375425 FOLH1Q04609 750 aa13.18□□□□□ -0.3
NELFE-201ENST00000375425 ASPHQ12797 758 aa13.18□□□□□ -0.3
NELFE-201ENST00000375425 BIKQ13323 160 aa13.18□□□□□ -0.3
NELFE-201ENST00000375425 GTF2H2Q13888 395 aa13.18□□□□□ -0.3
NELFE-201ENST00000375425 GTF2H2CQ6P1K8 395 aa13.18□□□□□ -0.3
NELFE-201ENST00000375425 DGAT2L6Q6ZPD8 337 aa13.18□□□□□ -0.3
NELFE-201ENST00000375425 RTL4Q6ZR62 310 aa13.18□□□□□ -0.3
NELFE-201ENST00000375425 GOLGA7Q7Z5G4 137 aa13.18□□□□□ -0.3
NELFE-201ENST00000375425 ZCCHC7Q8N3Z6 543 aaKnown RBP13.18□□□□□ -0.3
NELFE-201ENST00000375425 REPS1Q96D71 796 aa13.18□□□□□ -0.3
NELFE-201ENST00000375425 SGCZQ96LD1 299 aa13.18□□□□□ -0.3
NELFE-201ENST00000375425 VPS11Q9H270 941 aa13.18□□□□□ -0.3
NELFE-201ENST00000375425 IPPKQ9H8X2 491 aa13.18□□□□□ -0.3
NELFE-201ENST00000375425 PLSCR2Q9NRY7 297 aa13.18□□□□□ -0.3
NELFE-201ENST00000375425 ZNF358Q9NW07 568 aa13.18□□□□□ -0.3
NELFE-201ENST00000375425 CPSF2Q9P2I0 782 aaKnown RBP13.18□□□□□ -0.3
NELFE-201ENST00000375425 RNF11Q9Y3C5 154 aa13.18□□□□□ -0.3
NELFE-201ENST00000375425 TNPO3Q9Y5L0 923 aaKnown RBP13.18□□□□□ -0.3
NELFE-201ENST00000375425 WASHC1A8K0Z3 465 aa13.17□□□□□ -0.3
NELFE-201ENST00000375425 FAM166BA8MTA8 275 aa13.17□□□□□ -0.3
NELFE-201ENST00000375425 HRKO00198 91 aa13.17□□□□□ -0.3
NELFE-201ENST00000375425 DYRK3O43781 588 aa13.17□□□□□ -0.3
NELFE-201ENST00000375425 UGDHO60701 494 aa13.17□□□□□ -0.3
NELFE-201ENST00000375425 EEDO75530 441 aaKnown RBP13.17□□□□□ -0.3
NELFE-201ENST00000375425 PRKRAO75569 313 aaKnown RBP13.17□□□□□ -0.3
NELFE-201ENST00000375425 URI1O94763 535 aaPredicted RBP13.17□□□□□ -0.3
NELFE-201ENST00000375425 IGKV3-11P04433 115 aa13.17□□□□□ -0.3
NELFE-201ENST00000375425 KIR3DL1P43629 444 aa13.17□□□□□ -0.3
NELFE-201ENST00000375425 NEK2P51955 445 aa13.17□□□□□ -0.3
NELFE-201ENST00000375425 ARFIP1P53367 373 aa13.17□□□□□ -0.3
NELFE-201ENST00000375425 HNRNPH2P55795 449 aaKnown RBP13.17□□□□□ -0.3
NELFE-201ENST00000375425 PHEXP78562 749 aa13.17□□□□□ -0.3
NELFE-201ENST00000375425 MPEG1Q2M385 716 aa13.17□□□□□ -0.3
NELFE-201ENST00000375425 PIGGQ5H8A4 983 aa13.17□□□□□ -0.3
NELFE-201ENST00000375425 PAOXQ6QHF9 649 aa13.17□□□□□ -0.3
NELFE-201ENST00000375425 OPN5Q6U736 354 aa13.17□□□□□ -0.3
NELFE-201ENST00000375425 GDF7Q7Z4P5 450 aa13.17□□□□□ -0.3
NELFE-201ENST00000375425 PLD6Q8N2A8 252 aaKnown RBP13.17□□□□□ -0.3
NELFE-201ENST00000375425 L3MBTL4Q8NA19 623 aa13.17□□□□□ -0.3
NELFE-201ENST00000375425 WDR20Q8TBZ3 569 aa13.17□□□□□ -0.3
NELFE-201ENST00000375425 DOK4Q8TEW6 326 aa13.17□□□□□ -0.3
NELFE-201ENST00000375425 CA5BP1Q8WTZ4 195 aa13.17□□□□□ -0.3
NELFE-201ENST00000375425 SDCCAG3Q96C92 435 aa13.17□□□□□ -0.3
NELFE-201ENST00000375425 PHF21BQ96EK2 531 aa13.17□□□□□ -0.3
NELFE-201ENST00000375425 ZNF717Q9BY31 904 aaPredicted RBP13.17□□□□□ -0.3
NELFE-201ENST00000375425 TTTY12Q9BZ98 90 aa13.17□□□□□ -0.3
NELFE-201ENST00000375425 ACSS3Q9H6R3 686 aa13.17□□□□□ -0.3
NELFE-201ENST00000375425 NOL11Q9H8H0 719 aaKnown RBP13.17□□□□□ -0.3
NELFE-201ENST00000375425 ZDHHC11Q9H8X9 412 aa13.17□□□□□ -0.3
NELFE-201ENST00000375425 PSD3Q9NYI0 1048 aa13.17□□□□□ -0.3
NELFE-201ENST00000375425 PHF11Q9UIL8 331 aa13.17□□□□□ -0.3
NELFE-201ENST00000375425 ASB4Q9Y574 426 aa13.17□□□□□ -0.3
NELFE-201ENST00000375425 PKDREJQ9NTG1 2253 aa13.17□□□□□ -0.3
NELFE-201ENST00000375425 NCOA6Q14686 2063 aaPredicted RBP13.16□□□□□ -0.3
NELFE-201ENST00000375425 GLOD5A6NK44 160 aa13.16□□□□□ -0.3
NELFE-201ENST00000375425 ACOT7O00154 380 aa13.16□□□□□ -0.3
NELFE-201ENST00000375425 CLDN9O95484 217 aa13.16□□□□□ -0.3
NELFE-201ENST00000375425 ACSL3O95573 720 aa13.16□□□□□ -0.3
NELFE-201ENST00000375425 GPR75O95800 540 aa13.16□□□□□ -0.3
NELFE-201ENST00000375425 BSGP35613 385 aa13.16□□□□□ -0.3
NELFE-201ENST00000375425 BUD31P41223 144 aaPredicted RBP13.16□□□□□ -0.3
NELFE-201ENST00000375425 PIK3CGP48736 1102 aa13.16□□□□□ -0.3
NELFE-201ENST00000375425 TNFRSF17Q02223 184 aa13.16□□□□□ -0.3
NELFE-201ENST00000375425 CUL3Q13618 768 aa13.16□□□□□ -0.3
NELFE-201ENST00000375425 TECRLQ5HYJ1 363 aa13.16□□□□□ -0.3
NELFE-201ENST00000375425 MRM1Q6IN84 353 aaKnown RBP13.16□□□□□ -0.3
NELFE-201ENST00000375425 METTL2BQ6P1Q9 378 aaKnown RBP13.16□□□□□ -0.3
NELFE-201ENST00000375425 RGS9BPQ6ZS82 235 aa13.16□□□□□ -0.3
NELFE-201ENST00000375425 CEP128Q6ZU80 1094 aa13.16□□□□□ -0.3
NELFE-201ENST00000375425 FAM47EQ6ZV65 393 aa13.16□□□□□ -0.3
NELFE-201ENST00000375425 SLC22A16Q86VW1 577 aa13.16□□□□□ -0.3
NELFE-201ENST00000375425 RELL1Q8IUW5 271 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms