RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 ADGRD2Q7Z7M1 963 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 MFSD2AQ8NA29 543 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 MGLLQ99685 303 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 FXYD6Q9H0Q3 95 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 IL26Q9NPH9 171 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 MGAT4BQ9UQ53 548 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 NUP205Q92621 2012 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 CLCA1A8K7I4 914 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 HCN1O60741 890 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 ALAS2P22557 587 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 KCNC4Q03721 635 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 GFOD2Q3B7J2 385 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 FUNDC1Q8IVP5 155 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 CCDC116Q8IYX3 515 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 OR6Q1Q8NGQ2 317 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 RTP3Q9BQQ7 232 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 CDADC1Q9BWV3 514 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 DPAGT1Q9H3H5 408 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 TRIM36Q9NQ86 728 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 EXTL2Q9UBQ6 330 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 SEC14L4Q9UDX3 406 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 GABRR3A8MPY1 467 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 SMLR1H3BR10 107 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 TAPBPO15533 448 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 RHCEP18577 417 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 POLR2IP36954 125 aaKnown RBP6.26□□□□□ -1.41
SMC1A-202ENST00000375340 GUCA1AP43080 201 aaPredicted RBP6.26□□□□□ -1.41
SMC1A-202ENST00000375340 AKR1D1P51857 326 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 CAV3P56539 151 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 DSG2Q14126 1118 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 LIN54Q6MZP7 749 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 GPR149Q86SP6 731 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 NEIL3Q8TAT5 605 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 ASB15Q8WXK1 588 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 HDHD5Q9BXW7 423 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 TP63Q9H3D4 680 aaPredicted RBP6.26□□□□□ -1.41
SMC1A-202ENST00000375340 MTG2Q9H4K7 406 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 HEBP1Q9NRV9 189 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 ZSCAN32Q9NX65 697 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 CKLFQ9UBR5 152 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 M0R3H8 397 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 GNSP15586 552 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 KCNC3Q14003 757 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 ZNF791Q3KP31 576 aaPredicted RBP6.26□□□□□ -1.41
SMC1A-202ENST00000375340 OR6C4Q8NGE1 309 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 OR5D16Q8NGK9 328 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 COQ8AQ8NI60 647 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 ISL2Q96A47 359 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 LRR1Q96L50 414 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 EFCAB11Q9BUY7 163 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 ZNF860A6NHJ4 632 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 A6NL46 340 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 XKRYO14609 159 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 KHNYNO15037 678 aaKnown RBP6.26□□□□□ -1.41
SMC1A-202ENST00000375340 MAB21L1Q13394 359 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 CEP68Q76N32 757 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 GALNT7Q86SF2 657 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 TNFAIP8L1Q8WVP5 186 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 DPF3Q92784 378 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 PEX13Q92968 403 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 UBXN10Q96LJ8 280 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 NDC1Q9BTX1 674 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 CNIH4Q9P003 139 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 REM1O75628 298 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 HK1P19367 917 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 GSTM3P21266 225 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 ACVR1BP36896 505 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 RING1Q06587 406 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 ZNF267Q14586 743 aaPredicted RBP6.26□□□□□ -1.41
SMC1A-202ENST00000375340 C10orf62Q5T681 223 aaPredicted RBP6.26□□□□□ -1.41
SMC1A-202ENST00000375340 MRPL10Q7Z7H8 261 aaKnown RBP6.26□□□□□ -1.41
SMC1A-202ENST00000375340 CHST4Q8NCG5 386 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 GPR26Q8NDV2 337 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 OVCA2Q8WZ82 227 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 RFT1Q96AA3 541 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 MACROD1Q9BQ69 325 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 GORASP2Q9H8Y8 452 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 CDH7Q9ULB5 785 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 ASB1Q9Y576 335 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 GREB1LQ9C091 1923 aaPredicted RBP6.26□□□□□ -1.41
SMC1A-202ENST00000375340 MYO9BQ13459 2157 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 BRWD3Q6RI45 1802 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 MBLAC1A4D2B0 266 aaPredicted RBP6.26□□□□□ -1.41
SMC1A-202ENST00000375340 PRAMEF12O95522 483 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 RETP07949 1114 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 ZNF30P17039 623 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 ARPC4P59998 168 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 PRSS58Q8IYP2 241 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 GGHQ92820 318 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 SLC25A36Q96CQ1 311 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 MAELQ96JY0 434 aaKnown RBP6.26□□□□□ -1.41
SMC1A-202ENST00000375340 RNF167Q9H6Y7 350 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 GPN2Q9H9Y4 310 aaPredicted RBP6.26□□□□□ -1.41
SMC1A-202ENST00000375340 ACOT13Q9NPJ3 140 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.26□□□□□ -1.41
SMC1A-202ENST00000375340 CALML5Q9NZT1 146 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 STOX2Q9P2F5 926 aaPredicted RBP6.26□□□□□ -1.41
SMC1A-202ENST00000375340 EXOSC1Q9Y3B2 195 aaKnown RBP6.26□□□□□ -1.41
SMC1A-202ENST00000375340 CNTRLQ7Z7A1 2325 aa6.26□□□□□ -1.41
SMC1A-202ENST00000375340 I3L521 148 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms