RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 M0R233 179 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 ACOT8O14734 319 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 HLA-EP13747 358 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 ERP29P30040 261 aaKnown RBP11.05□□□□□ -0.64
PTCH1-203ENST00000375274 SLC6A6P31641 620 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 MAD2L1BPQ15013 274 aaPredicted RBP11.05□□□□□ -0.64
PTCH1-203ENST00000375274 RTP2Q5QGT7 225 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 YIPF7Q8N8F6 280 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 PMEPA1Q969W9 287 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 SCRN2Q96FV2 425 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 F2RL3Q96RI0 385 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 NELL2Q99435 816 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 HDHD5Q9BXW7 423 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 ABCG2Q9UNQ0 655 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 MAB21L2Q9Y586 359 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 A0A0U1RQS6 177 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 HMX2A2RU54 273 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 WASH4PA8MWX3 477 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 TRIM3O75382 744 aaPredicted RBP11.05□□□□□ -0.64
PTCH1-203ENST00000375274 UPK1BO75841 260 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 SLC16A8O95907 504 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 ACRP10323 421 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 SDC1P18827 310 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 S100GP29377 79 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 CA5AP35218 305 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 RBM34P42696 430 aaKnown RBP11.05□□□□□ -0.64
PTCH1-203ENST00000375274 SPINT3P49223 89 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 ZXDBP98169 803 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 SCRN3Q0VDG4 424 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 INO80EQ8NBZ0 244 aaPredicted RBP11.05□□□□□ -0.64
PTCH1-203ENST00000375274 C3orf58Q8NDZ4 430 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 OR4E2Q8NGC2 313 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 OR4K5Q8NGD3 323 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 GATAD2BQ8WXI9 593 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 GTPBP2Q9BX10 602 aaKnown RBP11.05□□□□□ -0.64
PTCH1-203ENST00000375274 NLKQ9UBE8 527 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 ZNF639Q9UID6 485 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 HEMK1Q9Y5R4 338 aaPredicted RBP11.05□□□□□ -0.64
PTCH1-203ENST00000375274 KANTRA0A1W2PQU2 76 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 OR3A3P47888 321 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 OR3A2P47893 321 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 APLP1P51693 650 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 RPA4Q13156 261 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 RGNQ15493 299 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 COMMD6Q7Z4G1 85 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 HMGN2P46Q86SG4 172 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 FAM217AQ8IXS0 508 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 ACBD7Q8N6N7 88 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 ZFP41Q8N8Y5 198 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 OR9Q2Q8NGE9 314 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 RPLP0P6Q8NHW5 317 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 SLC25A36Q96CQ1 311 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 TMEM19Q96HH6 336 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 IL17FQ96PD4 163 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 TTTY10Q9BZA0 68 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 ZDHHC4Q9NPG8 344 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 MSRAQ9UJ68 235 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 FBXL21Q9UKT6 434 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 SARDHQ9UL12 918 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 LIPT1Q9Y234 373 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 IFT52Q9Y366 437 aa11.05□□□□□ -0.64
PTCH1-203ENST00000375274 ZBTB42B2RXF5 422 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 EEF1E1O43324 174 aaKnown RBP11.04□□□□□ -0.64
PTCH1-203ENST00000375274 PYCR1P32322 319 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 CXCR4P61073 352 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 SELENOWP63302 87 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 GRM2Q14416 872 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 EIF4HQ15056 248 aaKnown RBP11.04□□□□□ -0.64
PTCH1-203ENST00000375274 TEX26Q8N6G2 289 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 GTF2H4Q92759 462 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 Q9N2J8 555 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 GMPR2Q9P2T1 348 aaKnown RBP11.04□□□□□ -0.64
PTCH1-203ENST00000375274 UBR2Q8IWV8 1755 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 TMEM150CB9EJG8 249 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 ANHXE9PGG2 379 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 ZNF670-ZNF695F2Z2N8 137 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 MRPL3P09001 348 aaKnown RBP11.04□□□□□ -0.64
PTCH1-203ENST00000375274 DNASE1P24855 282 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 MTNR1AP48039 350 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 SEC23BQ15437 767 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 TEAD2Q15562 447 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 GDPGP1Q6ZNW5 385 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 TMED4Q7Z7H5 227 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 APCDD1Q8J025 514 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 SPAG16Q8N0X2 631 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 ARRDC2Q8TBH0 407 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 MOAP1Q96BY2 351 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 TRPV4Q9HBA0 871 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 CSNK1G1Q9HCP0 422 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 PSMD9O00233 223 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 PRLP01236 227 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 ALPLP05186 524 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 ZNF267Q14586 743 aaPredicted RBP11.04□□□□□ -0.64
PTCH1-203ENST00000375274 PAQR9Q6ZVX9 377 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 ZNF551Q7Z340 670 aaPredicted RBP11.04□□□□□ -0.64
PTCH1-203ENST00000375274 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.04□□□□□ -0.64
PTCH1-203ENST00000375274 MDGA1Q8NFP4 955 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 OR7G3Q8NG95 312 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 OR51A7Q8NH64 312 aa11.04□□□□□ -0.64
PTCH1-203ENST00000375274 CCDC115Q96NT0 180 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms