RNA–Protein interactions for RNA: ENST00000375167.1

H2AFX-201, Transcript of H2A histone family member X, humanhuman

TSL 2

Gene H2AFX, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-201ENST00000375167 CTAGE6Q86UF2 777 aa15.95■□□□□ 0.14
H2AFX-201ENST00000375167 CTAGE4Q8IX94 777 aa15.95■□□□□ 0.14
H2AFX-201ENST00000375167 PDIK1LQ8N165 341 aa15.95■□□□□ 0.14
H2AFX-201ENST00000375167 AGGF1Q8N302 714 aaeCLIP15.95■□□□□ 0.14
H2AFX-201ENST00000375167 JSRP1Q96MG2 331 aaPredicted RBP15.95■□□□□ 0.14
H2AFX-201ENST00000375167 ERP44Q9BS26 406 aa15.95■□□□□ 0.14
H2AFX-201ENST00000375167 ANGPTL4Q9BY76 406 aa15.95■□□□□ 0.14
H2AFX-201ENST00000375167 TRIM31Q9BZY9 425 aa15.95■□□□□ 0.14
H2AFX-201ENST00000375167 RHBGQ9H310 441 aa15.95■□□□□ 0.14
H2AFX-201ENST00000375167 ACBD3Q9H3P7 528 aa15.95■□□□□ 0.14
H2AFX-201ENST00000375167 PACSIN3Q9UKS6 424 aa15.95■□□□□ 0.14
H2AFX-201ENST00000375167 MMACHCQ9Y4U1 282 aa15.95■□□□□ 0.14
H2AFX-201ENST00000375167 A8MXE2 369 aa15.94■□□□□ 0.14
H2AFX-201ENST00000375167 RAD51CO43502 376 aa15.94■□□□□ 0.14
H2AFX-201ENST00000375167 RPL21P46778 160 aaKnown RBP15.94■□□□□ 0.14
H2AFX-201ENST00000375167 RPS4XP62701 263 aaKnown RBP15.94■□□□□ 0.14
H2AFX-201ENST00000375167 SLC22A10Q63ZE4 541 aa15.94■□□□□ 0.14
H2AFX-201ENST00000375167 LDB1Q86U70 411 aaPredicted RBP15.94■□□□□ 0.14
H2AFX-201ENST00000375167 LRRC6Q86X45 466 aa15.94■□□□□ 0.14
H2AFX-201ENST00000375167 BBOF1Q8ND07 529 aa15.94■□□□□ 0.14
H2AFX-201ENST00000375167 ZNF669Q96BR6 464 aaPredicted RBP15.94■□□□□ 0.14
H2AFX-201ENST00000375167 ZMYND19Q96E35 227 aaPredicted RBP15.94■□□□□ 0.14
H2AFX-201ENST00000375167 TCF12Q99081 682 aa15.94■□□□□ 0.14
H2AFX-201ENST00000375167 NAT9Q9BTE0 207 aa15.94■□□□□ 0.14
H2AFX-201ENST00000375167 SGPP1Q9BX95 441 aa15.94■□□□□ 0.14
H2AFX-201ENST00000375167 CLK4Q9HAZ1 481 aaKnown RBP15.94■□□□□ 0.14
H2AFX-201ENST00000375167 SH2D2AQ9NP31 389 aa15.94■□□□□ 0.14
H2AFX-201ENST00000375167 ZCWPW2A0A1B0GU75 182 aa15.93■□□□□ 0.14
H2AFX-201ENST00000375167 PFDN6O15212 129 aa15.93■□□□□ 0.14
H2AFX-201ENST00000375167 TP73O15350 636 aa15.93■□□□□ 0.14
H2AFX-201ENST00000375167 NDUFS3O75489 264 aa15.93■□□□□ 0.14
H2AFX-201ENST00000375167 SYF2O95926 243 aaKnown RBP15.93■□□□□ 0.14
H2AFX-201ENST00000375167 B3GALT4O96024 378 aa15.93■□□□□ 0.14
H2AFX-201ENST00000375167 PGAM1P18669 254 aa15.93■□□□□ 0.14
H2AFX-201ENST00000375167 LOXP28300 417 aaPredicted RBP15.93■□□□□ 0.14
H2AFX-201ENST00000375167 MTTPP55157 894 aa15.93■□□□□ 0.14
H2AFX-201ENST00000375167 MRPS25P82663 173 aaKnown RBP15.93■□□□□ 0.14
H2AFX-201ENST00000375167 DHX9Q08211 1270 aaKnown RBP15.93■□□□□ 0.14
H2AFX-201ENST00000375167 BMPR2Q13873 1038 aa15.93■□□□□ 0.14
H2AFX-201ENST00000375167 MSS51Q4VC12 460 aa15.93■□□□□ 0.14
H2AFX-201ENST00000375167 PRAMEF20Q5VT98 475 aa15.93■□□□□ 0.14
H2AFX-201ENST00000375167 NEPROQ6NW34 567 aa15.93■□□□□ 0.14
H2AFX-201ENST00000375167 MEX3DQ86XN8 651 aaKnown RBP15.93■□□□□ 0.14
H2AFX-201ENST00000375167 OTUD6BQ8N6M0 293 aa15.93■□□□□ 0.14
H2AFX-201ENST00000375167 SGMS2Q8NHU3 365 aa15.93■□□□□ 0.14
H2AFX-201ENST00000375167 SLC22A8Q8TCC7 542 aa15.93■□□□□ 0.14
H2AFX-201ENST00000375167 MARK4Q96L34 752 aa15.93■□□□□ 0.14
H2AFX-201ENST00000375167 TM9SF2Q99805 663 aa15.93■□□□□ 0.14
H2AFX-201ENST00000375167 RAB17Q9H0T7 212 aa15.93■□□□□ 0.14
H2AFX-201ENST00000375167 P2RY12Q9H244 342 aa15.93■□□□□ 0.14
H2AFX-201ENST00000375167 ADAP2Q9NPF8 381 aa15.93■□□□□ 0.14
H2AFX-201ENST00000375167 CCDC177Q9NQR7 707 aaPredicted RBP15.93■□□□□ 0.14
H2AFX-201ENST00000375167 SNX24Q9Y343 169 aa15.93■□□□□ 0.14
H2AFX-201ENST00000375167 UTP11Q9Y3A2 253 aaKnown RBP15.93■□□□□ 0.14
H2AFX-201ENST00000375167 GOLGA8KD6RF30 607 aa15.92■□□□□ 0.14
H2AFX-201ENST00000375167 GOLGA8TH3BQL2 631 aa15.92■□□□□ 0.14
H2AFX-201ENST00000375167 LCMT2O60294 686 aaKnown RBP15.92■□□□□ 0.14
H2AFX-201ENST00000375167 TTC4O95801 387 aa15.92■□□□□ 0.14
H2AFX-201ENST00000375167 ZNF888P0CJ79 500 aaPredicted RBP15.92■□□□□ 0.14
H2AFX-201ENST00000375167 OGNP20774 298 aaKnown RBP15.92■□□□□ 0.14
H2AFX-201ENST00000375167 PPP2R1BP30154 601 aa15.92■□□□□ 0.14
H2AFX-201ENST00000375167 PCYT1AP49585 367 aa15.92■□□□□ 0.14
H2AFX-201ENST00000375167 EEF1A1P68104 462 aaKnown RBP15.92■□□□□ 0.14
H2AFX-201ENST00000375167 FAM27E3Q08E93 113 aa15.92■□□□□ 0.14
H2AFX-201ENST00000375167 THOC5Q13769 683 aaKnown RBP15.92■□□□□ 0.14
H2AFX-201ENST00000375167 GBX1Q14549 363 aa15.92■□□□□ 0.14
H2AFX-201ENST00000375167 BBS9Q3SYG4 887 aa15.92■□□□□ 0.14
H2AFX-201ENST00000375167 EEF1A1P5Q5VTE0 462 aa15.92■□□□□ 0.14
H2AFX-201ENST00000375167 VASNQ6EMK4 673 aa15.92■□□□□ 0.14
H2AFX-201ENST00000375167 PPM1NQ8N819 430 aa15.92■□□□□ 0.14
H2AFX-201ENST00000375167 ZNF611Q8N823 705 aa15.92■□□□□ 0.14
H2AFX-201ENST00000375167 MFSD9Q8NBP5 474 aa15.92■□□□□ 0.14
H2AFX-201ENST00000375167 QRFPRQ96P65 431 aa15.92■□□□□ 0.14
H2AFX-201ENST00000375167 FAM111AQ96PZ2 611 aa15.92■□□□□ 0.14
H2AFX-201ENST00000375167 WHRNQ9P202 907 aa15.92■□□□□ 0.14
H2AFX-201ENST00000375167 NINQ8N4C6 2090 aa15.92■□□□□ 0.14
H2AFX-201ENST00000375167 BANF1O75531 89 aa15.91■□□□□ 0.14
H2AFX-201ENST00000375167 CYP4B1P13584 511 aa15.91■□□□□ 0.14
H2AFX-201ENST00000375167 RPS3P23396 243 aaKnown RBP eCLIP15.91■□□□□ 0.146e-10■■■■□ 25.6
H2AFX-201ENST00000375167 ACVR1BP36896 505 aa15.91■□□□□ 0.14
H2AFX-201ENST00000375167 CASP9P55211 416 aa15.91■□□□□ 0.14
H2AFX-201ENST00000375167 ARL4CP56559 192 aa15.91■□□□□ 0.14
H2AFX-201ENST00000375167 RGS1Q08116 209 aa15.91■□□□□ 0.14
H2AFX-201ENST00000375167 CALCOCO2Q13137 446 aa15.91■□□□□ 0.14
H2AFX-201ENST00000375167 PWP1Q13610 501 aa15.91■□□□□ 0.14
H2AFX-201ENST00000375167 DUPD1Q68J44 220 aa15.91■□□□□ 0.14
H2AFX-201ENST00000375167 ADGRD1Q6QNK2 874 aa15.91■□□□□ 0.14
H2AFX-201ENST00000375167 ZNF704Q6ZNC4 412 aaPredicted RBP15.91■□□□□ 0.14
H2AFX-201ENST00000375167 CILP2Q8IUL8 1156 aa15.91■□□□□ 0.14
H2AFX-201ENST00000375167 LRRC56Q8IYG6 542 aaPredicted RBP15.91■□□□□ 0.14
H2AFX-201ENST00000375167 TMEM132CQ8N3T6 1108 aa15.91■□□□□ 0.14
H2AFX-201ENST00000375167 OR5L2Q8NGL0 311 aa15.91■□□□□ 0.14
H2AFX-201ENST00000375167 UCN3Q969E3 161 aa15.91■□□□□ 0.14
H2AFX-201ENST00000375167 INTS12Q96CB8 462 aaKnown RBP15.91■□□□□ 0.14
H2AFX-201ENST00000375167 LRRC39Q96DD0 335 aa15.91■□□□□ 0.14
H2AFX-201ENST00000375167 ZC3HAV1LQ96H79 300 aaKnown RBP15.91■□□□□ 0.14
H2AFX-201ENST00000375167 SLCO5A1Q9H2Y9 848 aa15.91■□□□□ 0.14
H2AFX-201ENST00000375167 WIF1Q9Y5W5 379 aa15.91■□□□□ 0.14
H2AFX-201ENST00000375167 CLCA3PQ9Y6N3 262 aa15.91■□□□□ 0.14
H2AFX-201ENST00000375167 GPRIN2O60269 458 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms