RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 ASIC5Q9NY37 505 aa10.66□□□□□ -0.7
HSPG2-202ENST00000374676 EHD3Q9NZN3 535 aa10.66□□□□□ -0.7
HSPG2-202ENST00000374676 HEY2Q9UBP5 337 aa10.66□□□□□ -0.7
HSPG2-202ENST00000374676 GIMAP2Q9UG22 337 aa10.66□□□□□ -0.7
HSPG2-202ENST00000374676 POLR3HQ9Y535 204 aaPredicted RBP10.66□□□□□ -0.7
HSPG2-202ENST00000374676 USH1CQ9Y6N9 552 aa10.66□□□□□ -0.7
HSPG2-202ENST00000374676 IGSF10Q6WRI0 2623 aa10.66□□□□□ -0.7
HSPG2-202ENST00000374676 NBEAQ8NFP9 2946 aa10.65□□□□□ -0.7
HSPG2-202ENST00000374676 IGHV1-45A0A0A0MS14 117 aa10.65□□□□□ -0.7
HSPG2-202ENST00000374676 WASHC1A8K0Z3 465 aa10.65□□□□□ -0.7
HSPG2-202ENST00000374676 FGF17O60258 216 aa10.65□□□□□ -0.7
HSPG2-202ENST00000374676 LDB3O75112 727 aa10.65□□□□□ -0.7
HSPG2-202ENST00000374676 PRKRAO75569 313 aaKnown RBP10.65□□□□□ -0.7
HSPG2-202ENST00000374676 HPP00738 406 aa10.65□□□□□ -0.7
HSPG2-202ENST00000374676 ITGB2P05107 769 aa10.65□□□□□ -0.7
HSPG2-202ENST00000374676 IL3P08700 152 aa10.65□□□□□ -0.7
HSPG2-202ENST00000374676 COX6A1P12074 109 aa10.65□□□□□ -0.7
HSPG2-202ENST00000374676 LBPP18428 481 aa10.65□□□□□ -0.7
HSPG2-202ENST00000374676 SDC1P18827 310 aa10.65□□□□□ -0.7
HSPG2-202ENST00000374676 TACR1P25103 407 aa10.65□□□□□ -0.7
HSPG2-202ENST00000374676 ASMTP46597 345 aa10.65□□□□□ -0.7
HSPG2-202ENST00000374676 SOX8P57073 446 aa10.65□□□□□ -0.7
HSPG2-202ENST00000374676 OR4D2P58180 307 aa10.65□□□□□ -0.7
HSPG2-202ENST00000374676 ERVK-8P63133 956 aa10.65□□□□□ -0.7
HSPG2-202ENST00000374676 FOLH1Q04609 750 aa10.65□□□□□ -0.7
HSPG2-202ENST00000374676 ACTN3Q08043 901 aaPredicted RBP10.65□□□□□ -0.7
HSPG2-202ENST00000374676 C2orf80Q0P641 193 aa10.65□□□□□ -0.7
HSPG2-202ENST00000374676 PCOLCEQ15113 449 aa10.65□□□□□ -0.7
HSPG2-202ENST00000374676 TERF2Q15554 542 aa10.65□□□□□ -0.7
HSPG2-202ENST00000374676 DEFB109BQ30KR1 87 aa10.65□□□□□ -0.7
HSPG2-202ENST00000374676 SFT2D3Q587I9 215 aa10.65□□□□□ -0.7
HSPG2-202ENST00000374676 DCAF10Q5QP82 559 aa10.65□□□□□ -0.7
HSPG2-202ENST00000374676 IL23RQ5VWK5 629 aa10.65□□□□□ -0.7
HSPG2-202ENST00000374676 OGFOD2Q6N063 350 aa10.65□□□□□ -0.7
HSPG2-202ENST00000374676 EPGNQ6UW88 154 aa10.65□□□□□ -0.7
HSPG2-202ENST00000374676 FAM47EQ6ZV65 393 aa10.65□□□□□ -0.7
HSPG2-202ENST00000374676 LANCL3Q6ZV70 420 aa10.65□□□□□ -0.7
HSPG2-202ENST00000374676 GPR155Q7Z3F1 870 aa10.65□□□□□ -0.7
HSPG2-202ENST00000374676 MAVSQ7Z434 540 aa10.65□□□□□ -0.7
HSPG2-202ENST00000374676 CLNKQ7Z7G1 428 aa10.65□□□□□ -0.7
HSPG2-202ENST00000374676 APLFQ8IW19 511 aaPredicted RBP10.65□□□□□ -0.7
HSPG2-202ENST00000374676 TMEM132CQ8N3T6 1108 aa10.65□□□□□ -0.7
HSPG2-202ENST00000374676 FNDC5Q8NAU1 212 aa10.65□□□□□ -0.7
HSPG2-202ENST00000374676 OR4K14Q8NGD5 310 aa10.65□□□□□ -0.7
HSPG2-202ENST00000374676 UCN3Q969E3 161 aa10.65□□□□□ -0.7
HSPG2-202ENST00000374676 ZNF764Q96H86 408 aaPredicted RBP10.65□□□□□ -0.7
HSPG2-202ENST00000374676 IMMP1LQ96LU5 166 aa10.65□□□□□ -0.7
HSPG2-202ENST00000374676 WDR77Q9BQA1 342 aaPredicted RBP10.65□□□□□ -0.7
HSPG2-202ENST00000374676 MESP1Q9BRJ9 268 aa10.65□□□□□ -0.7
HSPG2-202ENST00000374676 FAM53CQ9NYF3 392 aa10.65□□□□□ -0.7
HSPG2-202ENST00000374676 TAS2R7Q9NYW3 318 aa10.65□□□□□ -0.7
HSPG2-202ENST00000374676 EIF3LQ9Y262 564 aaKnown RBP10.65□□□□□ -0.7
HSPG2-202ENST00000374676 MAN2B2Q9Y2E5 1009 aa10.65□□□□□ -0.7
HSPG2-202ENST00000374676 KCNMB2Q9Y691 235 aa10.65□□□□□ -0.7
HSPG2-202ENST00000374676 CHD6Q8TD26 2715 aa10.64□□□□□ -0.71
HSPG2-202ENST00000374676 SPTA1P02549 2419 aa10.64□□□□□ -0.71
HSPG2-202ENST00000374676 NSG1A0A0A6YYJ2 146 aa10.64□□□□□ -0.71
HSPG2-202ENST00000374676 GLOD5A6NK44 160 aa10.64□□□□□ -0.71
HSPG2-202ENST00000374676 TBX19O60806 448 aa10.64□□□□□ -0.71
HSPG2-202ENST00000374676 SLC35E2P0CK97 266 aa10.64□□□□□ -0.71
HSPG2-202ENST00000374676 ICAM2P13598 275 aa10.64□□□□□ -0.71
HSPG2-202ENST00000374676 DDCP20711 480 aa10.64□□□□□ -0.71
HSPG2-202ENST00000374676 PIK3R1P27986 724 aa10.64□□□□□ -0.71
HSPG2-202ENST00000374676 EPHA3P29320 983 aa10.64□□□□□ -0.71
HSPG2-202ENST00000374676 GALNSP34059 522 aa10.64□□□□□ -0.71
HSPG2-202ENST00000374676 STT3AP46977 705 aa10.64□□□□□ -0.71
HSPG2-202ENST00000374676 EEF1A2Q05639 463 aaKnown RBP10.64□□□□□ -0.71
HSPG2-202ENST00000374676 ELAVL1Q15717 326 aaKnown RBP10.64□□□□□ -0.71
HSPG2-202ENST00000374676 SLC9B1Q4ZJI4 515 aa10.64□□□□□ -0.71
HSPG2-202ENST00000374676 VWA5B1Q5TIE3 1220 aa10.64□□□□□ -0.71
HSPG2-202ENST00000374676 CPZQ66K79 652 aa10.64□□□□□ -0.71
HSPG2-202ENST00000374676 C19orf48Q6RUI8 117 aa10.64□□□□□ -0.71
HSPG2-202ENST00000374676 OR4N5Q8IXE1 308 aa10.64□□□□□ -0.71
HSPG2-202ENST00000374676 ST13P4Q8IZP2 240 aaPredicted RBP10.64□□□□□ -0.71
HSPG2-202ENST00000374676 FAM9CQ8IZT9 166 aa10.64□□□□□ -0.71
HSPG2-202ENST00000374676 CEP70Q8NHQ1 597 aa10.64□□□□□ -0.71
HSPG2-202ENST00000374676 APOBEC4Q8WW27 367 aaKnown RBP10.64□□□□□ -0.71
HSPG2-202ENST00000374676 STON2Q8WXE9 905 aa10.64□□□□□ -0.71
HSPG2-202ENST00000374676 MTERF3Q96E29 417 aa10.64□□□□□ -0.71
HSPG2-202ENST00000374676 EGLN2Q96KS0 407 aa10.64□□□□□ -0.71
HSPG2-202ENST00000374676 PPP1R36Q96LQ0 422 aa10.64□□□□□ -0.71
HSPG2-202ENST00000374676 LPAR4Q99677 370 aa10.64□□□□□ -0.71
HSPG2-202ENST00000374676 SIKE1Q9BRV8 207 aa10.64□□□□□ -0.71
HSPG2-202ENST00000374676 PELOQ9BRX2 385 aaKnown RBP10.64□□□□□ -0.71
HSPG2-202ENST00000374676 C1orf50Q9BV19 199 aa10.64□□□□□ -0.71
HSPG2-202ENST00000374676 WDR55Q9H6Y2 383 aaPredicted RBP10.64□□□□□ -0.71
HSPG2-202ENST00000374676 ADAP2Q9NPF8 381 aa10.64□□□□□ -0.71
HSPG2-202ENST00000374676 ATP13A2Q9NQ11 1180 aa10.64□□□□□ -0.71
HSPG2-202ENST00000374676 NOP53Q9NZM5 478 aaKnown RBP10.64□□□□□ -0.71
HSPG2-202ENST00000374676 BAIAP2L1Q9UHR4 511 aa10.64□□□□□ -0.71
HSPG2-202ENST00000374676 FBXL4Q9UKA2 621 aa10.64□□□□□ -0.71
HSPG2-202ENST00000374676 PPIEQ9UNP9 301 aaKnown RBP10.64□□□□□ -0.71
HSPG2-202ENST00000374676 EXO1Q9UQ84 846 aaKnown RBP10.64□□□□□ -0.71
HSPG2-202ENST00000374676 ATRXP46100 2492 aa10.64□□□□□ -0.71
HSPG2-202ENST00000374676 LOC400499M0QZD8 3231 aa10.63□□□□□ -0.71
HSPG2-202ENST00000374676 IGHV3-20A0A0C4DH32 117 aa10.63□□□□□ -0.71
HSPG2-202ENST00000374676 SAGE2PA6NJ88 616 aa10.63□□□□□ -0.71
HSPG2-202ENST00000374676 ARGFXA6NJG6 315 aa10.63□□□□□ -0.71
HSPG2-202ENST00000374676 PORP16435 677 aaPredicted RBP10.63□□□□□ -0.71
HSPG2-202ENST00000374676 CSNK2A2P19784 350 aaPredicted RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms