RNA–Protein interactions for RNA: ENST00000374466.3

CSGALNACT2-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT2-201ENST00000374466 EFNA3P52797 238 aa10.47□□□□□ -0.73
CSGALNACT2-201ENST00000374466 HEPHL1Q6MZM0 1159 aa10.47□□□□□ -0.73
CSGALNACT2-201ENST00000374466 RIPOR1Q6ZS17 1223 aa10.47□□□□□ -0.73
CSGALNACT2-201ENST00000374466 FAM47EQ6ZV65 393 aa10.47□□□□□ -0.73
CSGALNACT2-201ENST00000374466 CCDC80Q76M96 950 aa10.47□□□□□ -0.73
CSGALNACT2-201ENST00000374466 TMEM126BQ8IUX1 230 aa10.47□□□□□ -0.73
CSGALNACT2-201ENST00000374466 GTF2H4Q92759 462 aa10.47□□□□□ -0.73
CSGALNACT2-201ENST00000374466 NEURL3Q96EH8 262 aa10.47□□□□□ -0.73
CSGALNACT2-201ENST00000374466 GIMAP5Q96F15 307 aa10.47□□□□□ -0.73
CSGALNACT2-201ENST00000374466 AMDHD1Q96NU7 426 aa10.47□□□□□ -0.73
CSGALNACT2-201ENST00000374466 WDR55Q9H6Y2 383 aaPredicted RBP10.47□□□□□ -0.73
CSGALNACT2-201ENST00000374466 FOXJ2Q9P0K8 574 aa10.47□□□□□ -0.73
CSGALNACT2-201ENST00000374466 C19orf25Q9UFG5 118 aaPredicted RBP10.47□□□□□ -0.73
CSGALNACT2-201ENST00000374466 LEF1Q9UJU2 399 aaPredicted RBP10.47□□□□□ -0.73
CSGALNACT2-201ENST00000374466 PTGDR2Q9Y5Y4 395 aa10.47□□□□□ -0.73
CSGALNACT2-201ENST00000374466 SAGE2PA6NJ88 616 aa10.47□□□□□ -0.73
CSGALNACT2-201ENST00000374466 MMP11P24347 488 aa10.47□□□□□ -0.73
CSGALNACT2-201ENST00000374466 TACR1P25103 407 aa10.47□□□□□ -0.73
CSGALNACT2-201ENST00000374466 MNAT1P51948 309 aa10.47□□□□□ -0.73
CSGALNACT2-201ENST00000374466 PHC1P78364 1004 aa10.47□□□□□ -0.73
CSGALNACT2-201ENST00000374466 STX5Q13190 355 aa10.47□□□□□ -0.73
CSGALNACT2-201ENST00000374466 ANKRD37Q7Z713 158 aa10.47□□□□□ -0.73
CSGALNACT2-201ENST00000374466 TMEM132CQ8N3T6 1108 aa10.47□□□□□ -0.73
CSGALNACT2-201ENST00000374466 ZSCAN1Q8NBB4 408 aa10.47□□□□□ -0.73
CSGALNACT2-201ENST00000374466 OR4K14Q8NGD5 310 aa10.47□□□□□ -0.73
CSGALNACT2-201ENST00000374466 ELP5Q8TE02 316 aa10.47□□□□□ -0.73
CSGALNACT2-201ENST00000374466 SAP130Q9H0E3 1048 aa10.47□□□□□ -0.73
CSGALNACT2-201ENST00000374466 SDK2Q58EX2 2172 aa10.46□□□□□ -0.73
CSGALNACT2-201ENST00000374466 CLDN4O14493 209 aa10.46□□□□□ -0.73
CSGALNACT2-201ENST00000374466 SNRPB2P08579 225 aaKnown RBP10.46□□□□□ -0.73
CSGALNACT2-201ENST00000374466 IL3P08700 152 aa10.46□□□□□ -0.73
CSGALNACT2-201ENST00000374466 SLC5A2P31639 672 aa10.46□□□□□ -0.73
CSGALNACT2-201ENST00000374466 TRHRP34981 398 aaPredicted RBP10.46□□□□□ -0.73
CSGALNACT2-201ENST00000374466 GABREP78334 506 aa10.46□□□□□ -0.73
CSGALNACT2-201ENST00000374466 EXT1Q16394 746 aa10.46□□□□□ -0.73
CSGALNACT2-201ENST00000374466 ZSWIM7Q19AV6 140 aa10.46□□□□□ -0.73
CSGALNACT2-201ENST00000374466 ZNF615Q8N8J6 731 aa10.46□□□□□ -0.73
CSGALNACT2-201ENST00000374466 THAP4Q8WY91 577 aa10.46□□□□□ -0.73
CSGALNACT2-201ENST00000374466 ZBED6CLQ96FA7 236 aaPredicted RBP10.46□□□□□ -0.73
CSGALNACT2-201ENST00000374466 ITCHQ96J02 903 aa10.46□□□□□ -0.73
CSGALNACT2-201ENST00000374466 BTBD9Q96Q07 612 aa10.46□□□□□ -0.73
CSGALNACT2-201ENST00000374466 ELAC2Q9BQ52 826 aaKnown RBP10.46□□□□□ -0.73
CSGALNACT2-201ENST00000374466 TMEM38AQ9H6F2 299 aa10.46□□□□□ -0.73
CSGALNACT2-201ENST00000374466 RPF2Q9H7B2 306 aaKnown RBP10.46□□□□□ -0.73
CSGALNACT2-201ENST00000374466 RMND5AQ9H871 391 aa10.46□□□□□ -0.73
CSGALNACT2-201ENST00000374466 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.46□□□□□ -0.73
CSGALNACT2-201ENST00000374466 PADI1Q9ULC6 663 aa10.46□□□□□ -0.73
CSGALNACT2-201ENST00000374466 POLR3HQ9Y535 204 aaPredicted RBP10.46□□□□□ -0.73
CSGALNACT2-201ENST00000374466 TGFBR3LH3BV60 316 aa10.46□□□□□ -0.73
CSGALNACT2-201ENST00000374466 FZD7O75084 574 aa10.46□□□□□ -0.73
CSGALNACT2-201ENST00000374466 KLK3P07288 261 aaPredicted RBP10.46□□□□□ -0.73
CSGALNACT2-201ENST00000374466 UQCRC2P22695 453 aa10.46□□□□□ -0.73
CSGALNACT2-201ENST00000374466 DIO3P55073 304 aa10.46□□□□□ -0.73
CSGALNACT2-201ENST00000374466 VWA5B1Q5TIE3 1220 aa10.46□□□□□ -0.73
CSGALNACT2-201ENST00000374466 ANKRD46Q86W74 232 aa10.46□□□□□ -0.73
CSGALNACT2-201ENST00000374466 OR9A4Q8NGU2 314 aa10.46□□□□□ -0.73
CSGALNACT2-201ENST00000374466 NMUR2Q9GZQ4 415 aa10.46□□□□□ -0.73
CSGALNACT2-201ENST00000374466 APMAPQ9HDC9 416 aa10.46□□□□□ -0.73
CSGALNACT2-201ENST00000374466 TEX10Q9NXF1 929 aaPredicted RBP10.46□□□□□ -0.73
CSGALNACT2-201ENST00000374466 TAGLN3Q9UI15 199 aa10.46□□□□□ -0.73
CSGALNACT2-201ENST00000374466 PCDHGB6Q9Y5F9 930 aa10.46□□□□□ -0.73
CSGALNACT2-201ENST00000374466 ZDBF2Q9HCK1 2354 aa10.46□□□□□ -0.74
CSGALNACT2-201ENST00000374466 DSPPQ9NZW4 1301 aa10.46□□□□□ -0.74
CSGALNACT2-201ENST00000374466 IGHV1-45A0A0A0MS14 117 aa10.46□□□□□ -0.74
CSGALNACT2-201ENST00000374466 CCT8L1PA6NM43 557 aa10.46□□□□□ -0.74
CSGALNACT2-201ENST00000374466 AGR2O95994 175 aa10.46□□□□□ -0.74
CSGALNACT2-201ENST00000374466 AK1P00568 194 aa10.46□□□□□ -0.74
CSGALNACT2-201ENST00000374466 GPX2P18283 190 aa10.46□□□□□ -0.74
CSGALNACT2-201ENST00000374466 CALB2P22676 271 aa10.46□□□□□ -0.74
CSGALNACT2-201ENST00000374466 CPOXP36551 454 aa10.46□□□□□ -0.74
CSGALNACT2-201ENST00000374466 ID4P47928 161 aa10.46□□□□□ -0.74
CSGALNACT2-201ENST00000374466 TAS2R50P59544 299 aa10.46□□□□□ -0.74
CSGALNACT2-201ENST00000374466 STX1BP61266 288 aa10.46□□□□□ -0.74
CSGALNACT2-201ENST00000374466 FADDQ13158 208 aa10.46□□□□□ -0.74
CSGALNACT2-201ENST00000374466 CLN3Q13286 438 aa10.46□□□□□ -0.74
CSGALNACT2-201ENST00000374466 PCOLCEQ15113 449 aa10.46□□□□□ -0.74
CSGALNACT2-201ENST00000374466 ZNF385BQ569K4 471 aa10.46□□□□□ -0.74
CSGALNACT2-201ENST00000374466 LRRC25Q8N386 305 aaPredicted RBP10.46□□□□□ -0.74
CSGALNACT2-201ENST00000374466 CT55Q8WUE5 264 aa10.46□□□□□ -0.74
CSGALNACT2-201ENST00000374466 FBXL20Q96IG2 436 aa10.46□□□□□ -0.74
CSGALNACT2-201ENST00000374466 ZBTB18Q99592 522 aa10.46□□□□□ -0.74
CSGALNACT2-201ENST00000374466 DPY30Q9C005 99 aa10.46□□□□□ -0.74
CSGALNACT2-201ENST00000374466 WDR41Q9HAD4 459 aa10.46□□□□□ -0.74
CSGALNACT2-201ENST00000374466 TXLNGQ9NUQ3 528 aa10.46□□□□□ -0.74
CSGALNACT2-201ENST00000374466 ARHGAP10A1A4S6 786 aa10.45□□□□□ -0.74
CSGALNACT2-201ENST00000374466 FBP2O00757 339 aa10.45□□□□□ -0.74
CSGALNACT2-201ENST00000374466 DDAH2O95865 285 aa10.45□□□□□ -0.74
CSGALNACT2-201ENST00000374466 PGRP06401 933 aa10.45□□□□□ -0.74
CSGALNACT2-201ENST00000374466 T-ENOLP0DO92 83 aa10.45□□□□□ -0.74
CSGALNACT2-201ENST00000374466 PORP16435 677 aaPredicted RBP10.45□□□□□ -0.74
CSGALNACT2-201ENST00000374466 CPN2P22792 545 aa10.45□□□□□ -0.74
CSGALNACT2-201ENST00000374466 RBMS1P29558 406 aaKnown RBP10.45□□□□□ -0.74
CSGALNACT2-201ENST00000374466 MVDP53602 400 aa10.45□□□□□ -0.74
CSGALNACT2-201ENST00000374466 RUNDC3AQ59EK9 446 aa10.45□□□□□ -0.74
CSGALNACT2-201ENST00000374466 PLAG1Q6DJT9 500 aa10.45□□□□□ -0.74
CSGALNACT2-201ENST00000374466 ADCK2Q7Z695 626 aa10.45□□□□□ -0.74
CSGALNACT2-201ENST00000374466 PLD3Q8IV08 490 aa10.45□□□□□ -0.74
CSGALNACT2-201ENST00000374466 CNRIP1Q96F85 164 aaPredicted RBP10.45□□□□□ -0.74
CSGALNACT2-201ENST00000374466 SECISBP2Q96T21 854 aaKnown RBP10.45□□□□□ -0.74
CSGALNACT2-201ENST00000374466 VN1R1Q9GZP7 353 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms