RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 RNF130Q86XS8 419 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 NRROSQ86YC3 692 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 ANKRD13BQ86YJ7 626 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 SLC44A2Q8IWA5 706 aaPredicted RBP8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 SPARTQ8N0X7 666 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 LGI4Q8N135 537 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 FAM86B1Q8N7N1 296 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 LINC01555Q8NAE3 123 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 WDR48Q8TAF3 677 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 SUN3Q8TAQ9 357 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 RORBQ92753 470 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 SLC35B4Q969S0 331 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 ISOC1Q96CN7 298 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 MS4A6EQ96DS6 147 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 FBXL20Q96IG2 436 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 TPD52L3Q96J77 140 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 MRGPRX1Q96LB2 322 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 DHRS1Q96LJ7 313 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 AMDHD1Q96NU7 426 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 F2RL3Q96RI0 385 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 BBS4Q96RK4 519 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 NELL2Q99435 816 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 TEX12Q9BXU0 123 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 AMBRA1Q9C0C7 1298 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 CHRNA10Q9GZZ6 450 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 SRMSQ9H3Y6 488 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 ARMC7Q9H6L4 198 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 POLR1BQ9H9Y6 1135 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 CARS2Q9HA77 564 aaKnown RBP8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 SIAEQ9HAT2 523 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 KRCC1Q9NPI7 259 aaPredicted RBP8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 SLC2A4RGQ9NR83 387 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 POLE3Q9NRF9 147 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 GPATCH2Q9NW75 528 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 KLHL28Q9NXS3 571 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 USP36Q9P275 1121 aaKnown RBP8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 PTGFRNQ9P2B2 879 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 CD207Q9UJ71 328 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 ACAD8Q9UKU7 415 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 USP22Q9UPT9 525 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 IFT52Q9Y366 437 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 LYVE1Q9Y5Y7 322 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 GPC6Q9Y625 555 aaPredicted RBP8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 PIAS3Q9Y6X2 628 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 PCM1Q15154 2024 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 LRRK1Q38SD2 2015 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 TCF20Q9UGU0 1960 aaKnown RBP8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 BRCA2P51587 3418 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 A0A087WV62 115 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 A0A1W2PRQ8 180 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 OR2A25A4D2G3 310 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 HTR3EA5X5Y0 456 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 EFCAB10A6NFE3 127 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 CLDN24A6NM45 220 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 C2orf74A8MZ97 194 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 H3BSA7 217 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 TNFRSF10AO00220 468 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 YY2O15391 372 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 ZW10O43264 779 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 RGS10O43665 173 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 ADAM23O75077 832 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 SEC24DO94855 1032 aaPredicted RBP8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 KLHL18O94889 574 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 MFN2O95140 757 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 NTRK1P04629 796 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 PIPP12273 146 aaPredicted RBP8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 ETFAP13804 333 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 RPL10P27635 214 aaKnown RBP8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 GPC1P35052 558 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 GGT2P36268 569 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 PEX19P40855 299 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 KCNJ5P48544 419 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 DAPP51397 102 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 SRP54P61011 504 aaKnown RBP8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 TUBA1BP68363 451 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 SLC35A2P78381 396 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 IL5RAQ01344 420 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 ALDH6A1Q02252 535 aaKnown RBP8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 CD47Q08722 323 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 SLAMF1Q13291 335 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 SLC14A1Q13336 389 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 ILKQ13418 452 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 DCTN2Q13561 401 aaKnown RBP8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 DGCR6Q14129 220 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 CLCA4Q14CN2 919 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 PLCL1Q15111 1095 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 TIMM50Q3ZCQ8 353 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 ZNF385BQ569K4 471 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 SYT6Q5T7P8 510 aaPredicted RBP8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 MEDAGQ5VYS4 303 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 ENPP7Q6UWV6 458 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 TUBA1AQ71U36 451 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 ADCK2Q7Z695 626 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 SPRED2Q7Z698 418 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 ZNF605Q86T29 641 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 ASPGQ86U10 573 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 PAQR7Q86WK9 346 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 OOSP2Q86WS3 158 aa8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 CLVS1Q8IUQ0 354 aaPredicted RBP8.26□□□□□ -1.09
SNRNP40-202ENST00000373720 TDHQ8IZJ6 230 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms