RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 ZNF473Q8WTR7 871 aaKnown RBP17.85■□□□□ 0.45
TRAPPC3-204ENST00000373166 REPS1Q96D71 796 aa17.85■□□□□ 0.45
TRAPPC3-204ENST00000373166 PTCHD1Q96NR3 888 aa17.85■□□□□ 0.45
TRAPPC3-204ENST00000373166 KCNC2Q96PR1 638 aa17.85■□□□□ 0.45
TRAPPC3-204ENST00000373166 F2RL3Q96RI0 385 aa17.85■□□□□ 0.45
TRAPPC3-204ENST00000373166 MRPL57Q9BQC6 102 aaKnown RBP17.85■□□□□ 0.45
TRAPPC3-204ENST00000373166 MS4A8Q9BY19 250 aa17.85■□□□□ 0.45
TRAPPC3-204ENST00000373166 DEFB126Q9BYW3 111 aa17.85■□□□□ 0.45
TRAPPC3-204ENST00000373166 ROGDIQ9GZN7 287 aa17.85■□□□□ 0.45
TRAPPC3-204ENST00000373166 PRDM9Q9NQV7 894 aa17.85■□□□□ 0.45
TRAPPC3-204ENST00000373166 PSMC3IPQ9P2W1 217 aaPredicted RBP17.85■□□□□ 0.45
TRAPPC3-204ENST00000373166 FETUBQ9UGM5 382 aa17.85■□□□□ 0.45
TRAPPC3-204ENST00000373166 ADGRE2Q9UHX3 823 aa17.85■□□□□ 0.45
TRAPPC3-204ENST00000373166 MRPS33Q9Y291 106 aaKnown RBP17.85■□□□□ 0.45
TRAPPC3-204ENST00000373166 SPG11Q96JI7 2443 aa17.84■□□□□ 0.45
TRAPPC3-204ENST00000373166 LRRC14BA6NHZ5 514 aa17.84■□□□□ 0.45
TRAPPC3-204ENST00000373166 STX16-NPEPL1H3BU86 382 aa17.84■□□□□ 0.45
TRAPPC3-204ENST00000373166 STX16O14662 325 aa17.84■□□□□ 0.45
TRAPPC3-204ENST00000373166 UGDHO60701 494 aa17.84■□□□□ 0.45
TRAPPC3-204ENST00000373166 ZWINTO95229 277 aa17.84■□□□□ 0.45
TRAPPC3-204ENST00000373166 SIX3O95343 332 aaPredicted RBP17.84■□□□□ 0.45
TRAPPC3-204ENST00000373166 TBX6O95947 436 aaPredicted RBP17.84■□□□□ 0.45
TRAPPC3-204ENST00000373166 HOXB4P17483 251 aaPredicted RBP17.84■□□□□ 0.45
TRAPPC3-204ENST00000373166 CERS1P27544 350 aa17.84■□□□□ 0.45
TRAPPC3-204ENST00000373166 ARL1P40616 181 aaPredicted RBP17.84■□□□□ 0.45
TRAPPC3-204ENST00000373166 RAB38P57729 211 aa17.84■□□□□ 0.45
TRAPPC3-204ENST00000373166 PMPCAQ10713 525 aa17.84■□□□□ 0.45
TRAPPC3-204ENST00000373166 DDX39BQ13838 428 aaKnown RBP17.84■□□□□ 0.45
TRAPPC3-204ENST00000373166 RCN2Q14257 317 aa17.84■□□□□ 0.45
TRAPPC3-204ENST00000373166 TMEM35AQ53FP2 167 aa17.84■□□□□ 0.45
TRAPPC3-204ENST00000373166 LIPJQ5W064 366 aa17.84■□□□□ 0.45
TRAPPC3-204ENST00000373166 ABHD17CQ6PCB6 329 aa17.84■□□□□ 0.45
TRAPPC3-204ENST00000373166 TIFABQ6ZNK6 161 aa17.84■□□□□ 0.45
TRAPPC3-204ENST00000373166 ACAD11Q709F0 780 aa17.84■□□□□ 0.45
TRAPPC3-204ENST00000373166 CLYBLQ8N0X4 340 aa17.84■□□□□ 0.45
TRAPPC3-204ENST00000373166 OR7G3Q8NG95 312 aa17.84■□□□□ 0.45
TRAPPC3-204ENST00000373166 PHF21BQ96EK2 531 aa17.84■□□□□ 0.45
TRAPPC3-204ENST00000373166 QRFPRQ96P65 431 aa17.84■□□□□ 0.45
TRAPPC3-204ENST00000373166 FOXC2Q99958 501 aa17.84■□□□□ 0.45
TRAPPC3-204ENST00000373166 CENPKQ9BS16 269 aa17.84■□□□□ 0.45
TRAPPC3-204ENST00000373166 IPPKQ9H8X2 491 aa17.84■□□□□ 0.45
TRAPPC3-204ENST00000373166 MMACHCQ9Y4U1 282 aa17.84■□□□□ 0.45
TRAPPC3-204ENST00000373166 PCDHGA11Q9Y5H2 935 aa17.84■□□□□ 0.45
TRAPPC3-204ENST00000373166 SAGE2PA6NJ88 616 aa17.83■□□□□ 0.44
TRAPPC3-204ENST00000373166 PDE9AO76083 593 aa17.83■□□□□ 0.44
TRAPPC3-204ENST00000373166 MAOAP21397 527 aa17.83■□□□□ 0.44
TRAPPC3-204ENST00000373166 BTG2P78543 158 aa17.83■□□□□ 0.44
TRAPPC3-204ENST00000373166 FOLH1Q04609 750 aa17.83■□□□□ 0.44
TRAPPC3-204ENST00000373166 RUNX2Q13950 521 aa17.83■□□□□ 0.44
TRAPPC3-204ENST00000373166 PAOXQ6QHF9 649 aa17.83■□□□□ 0.44
TRAPPC3-204ENST00000373166 CHSY3Q70JA7 882 aa17.83■□□□□ 0.44
TRAPPC3-204ENST00000373166 LCA5Q86VQ0 697 aa17.83■□□□□ 0.44
TRAPPC3-204ENST00000373166 TGIF2LYQ8IUE0 185 aa17.83■□□□□ 0.44
TRAPPC3-204ENST00000373166 CCDC71Q8IV32 467 aaPredicted RBP17.83■□□□□ 0.44
TRAPPC3-204ENST00000373166 CYP4Z2PQ8N1L4 340 aa17.83■□□□□ 0.44
TRAPPC3-204ENST00000373166 ARMC10Q8N2F6 343 aa17.83■□□□□ 0.44
TRAPPC3-204ENST00000373166 ZFP62Q8NB50 900 aaPredicted RBP17.83■□□□□ 0.44
TRAPPC3-204ENST00000373166 UBLCP1Q8WVY7 318 aaPredicted RBP17.83■□□□□ 0.44
TRAPPC3-204ENST00000373166 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.83■□□□□ 0.44
TRAPPC3-204ENST00000373166 NRGNQ92686 78 aa17.83■□□□□ 0.44
TRAPPC3-204ENST00000373166 CMTM7Q96FZ5 175 aa17.83■□□□□ 0.44
TRAPPC3-204ENST00000373166 TBCDQ9BTW9 1192 aa17.83■□□□□ 0.44
TRAPPC3-204ENST00000373166 CXXC4Q9H2H0 198 aa17.83■□□□□ 0.44
TRAPPC3-204ENST00000373166 EPB41L4BQ9H329 900 aa17.83■□□□□ 0.44
TRAPPC3-204ENST00000373166 PLSCR2Q9NRY7 297 aa17.83■□□□□ 0.44
TRAPPC3-204ENST00000373166 TCRBV16S1A1N1A0A5B0 115 aa17.82■□□□□ 0.44
TRAPPC3-204ENST00000373166 CLDN4O14493 209 aa17.82■□□□□ 0.44
TRAPPC3-204ENST00000373166 PIK3CBP42338 1070 aa17.82■□□□□ 0.44
TRAPPC3-204ENST00000373166 RAP1GDS1P52306 607 aa17.82■□□□□ 0.44
TRAPPC3-204ENST00000373166 PPP2R2AP63151 447 aa17.82■□□□□ 0.44
TRAPPC3-204ENST00000373166 KHDRBS2Q5VWX1 349 aaKnown RBP17.82■□□□□ 0.44
TRAPPC3-204ENST00000373166 TMEM156Q8N614 296 aa17.82■□□□□ 0.44
TRAPPC3-204ENST00000373166 FAM47BQ8NA70 645 aa17.82■□□□□ 0.44
TRAPPC3-204ENST00000373166 HUS1BQ8NHY5 278 aa17.82■□□□□ 0.44
TRAPPC3-204ENST00000373166 NINJ1Q92982 152 aa17.82■□□□□ 0.44
TRAPPC3-204ENST00000373166 ATP6V1E2Q96A05 226 aa17.82■□□□□ 0.44
TRAPPC3-204ENST00000373166 DMRT3Q9NQL9 472 aa17.82■□□□□ 0.44
TRAPPC3-204ENST00000373166 PCTPQ9UKL6 214 aa17.82■□□□□ 0.44
TRAPPC3-204ENST00000373166 TSC22D4Q9Y3Q8 395 aa17.82■□□□□ 0.44
TRAPPC3-204ENST00000373166 SPACA6W5XKT8 324 aa17.82■□□□□ 0.44
TRAPPC3-204ENST00000373166 GTF3C1Q12789 2109 aa17.81■□□□□ 0.44
TRAPPC3-204ENST00000373166 MAP1AP78559 2803 aaPredicted RBP17.81■□□□□ 0.44
TRAPPC3-204ENST00000373166 IGKV3D-11A0A0A0MRZ8 115 aa17.81■□□□□ 0.44
TRAPPC3-204ENST00000373166 H0YIV9 168 aa17.81■□□□□ 0.44
TRAPPC3-204ENST00000373166 SH3BGRLO75368 114 aa17.81■□□□□ 0.44
TRAPPC3-204ENST00000373166 TGFB1P01137 390 aa17.81■□□□□ 0.44
TRAPPC3-204ENST00000373166 SSR2P43308 183 aa17.81■□□□□ 0.44
TRAPPC3-204ENST00000373166 LIM2P55344 173 aa17.81■□□□□ 0.44
TRAPPC3-204ENST00000373166 HSD17B7P56937 341 aa17.81■□□□□ 0.44
TRAPPC3-204ENST00000373166 NUP107P57740 925 aa17.81■□□□□ 0.44
TRAPPC3-204ENST00000373166 SLC13A2Q13183 592 aa17.81■□□□□ 0.44
TRAPPC3-204ENST00000373166 CPSF6Q16630 551 aaKnown RBP eCLIP17.81■□□□□ 0.44
TRAPPC3-204ENST00000373166 AP5B1Q2VPB7 878 aa17.81■□□□□ 0.44
TRAPPC3-204ENST00000373166 ZNF595Q8IYB9 648 aa17.81■□□□□ 0.44
TRAPPC3-204ENST00000373166 RPRMLQ8N4K4 120 aa17.81■□□□□ 0.44
TRAPPC3-204ENST00000373166 L3MBTL4Q8NA19 623 aa17.81■□□□□ 0.44
TRAPPC3-204ENST00000373166 NFAM1Q8NET5 270 aaPredicted RBP17.81■□□□□ 0.44
TRAPPC3-204ENST00000373166 MYRIPQ8NFW9 859 aa17.81■□□□□ 0.44
TRAPPC3-204ENST00000373166 OR52N2Q8NGI0 321 aa17.81■□□□□ 0.44
TRAPPC3-204ENST00000373166 OR5M3Q8NGP4 307 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms