RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 WRAP53Q9BUR4 548 aaKnown RBP13.05□□□□□ -0.32
USP49-201ENST00000373006 FAM83DQ9H4H8 585 aa13.05□□□□□ -0.32
USP49-201ENST00000373006 MARCH5Q9NX47 278 aa13.05□□□□□ -0.32
USP49-201ENST00000373006 TRPM5Q9NZQ8 1165 aa13.05□□□□□ -0.32
USP49-201ENST00000373006 NLKQ9UBE8 527 aa13.05□□□□□ -0.32
USP49-201ENST00000373006 SPIN1Q9Y657 262 aaPredicted RBP13.05□□□□□ -0.32
USP49-201ENST00000373006 ATP6V1G2-DDX39BF2Z307 99 aa13.05□□□□□ -0.32
USP49-201ENST00000373006 INPPL1O15357 1258 aa13.05□□□□□ -0.32
USP49-201ENST00000373006 TGFB1P01137 390 aa13.05□□□□□ -0.32
USP49-201ENST00000373006 ATP1B2P14415 290 aaPredicted RBP13.05□□□□□ -0.32
USP49-201ENST00000373006 SLC11A1P49279 550 aa13.05□□□□□ -0.32
USP49-201ENST00000373006 MAPK12P53778 367 aa13.05□□□□□ -0.32
USP49-201ENST00000373006 GPR19Q15760 415 aa13.05□□□□□ -0.32
USP49-201ENST00000373006 MPEG1Q2M385 716 aa13.05□□□□□ -0.32
USP49-201ENST00000373006 ATAT1Q5SQI0 421 aa13.05□□□□□ -0.32
USP49-201ENST00000373006 OR2G6Q5TZ20 316 aa13.05□□□□□ -0.32
USP49-201ENST00000373006 ZNF770Q6IQ21 691 aaPredicted RBP13.05□□□□□ -0.32
USP49-201ENST00000373006 AGTRAPQ6RW13 159 aa13.05□□□□□ -0.32
USP49-201ENST00000373006 PDZD3Q86UT5 571 aa13.05□□□□□ -0.32
USP49-201ENST00000373006 REPS1Q96D71 796 aa13.05□□□□□ -0.32
USP49-201ENST00000373006 ZNF224Q9NZL3 707 aa13.05□□□□□ -0.32
USP49-201ENST00000373006 KCNN3Q9UGI6 736 aa13.05□□□□□ -0.32
USP49-201ENST00000373006 ALG5Q9Y673 324 aa13.05□□□□□ -0.32
USP49-201ENST00000373006 ARHGEF33A8MVX0 844 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 RHCEP18577 417 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 SDHBP21912 280 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 PREPP48147 710 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 ALDH9A1P49189 494 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 C1DQ13901 141 aaKnown RBP13.04□□□□□ -0.32
USP49-201ENST00000373006 PRSS53Q2L4Q9 553 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 SPDYE7PQ495Y7 208 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 FLYWCH1Q4VC44 716 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 RETSATQ6NUM9 610 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 C17orf99Q6UX52 265 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 GDPGP1Q6ZNW5 385 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 GLRX5Q86SX6 157 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 OR8H3Q8N146 312 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 ZFP41Q8N8Y5 198 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 FBXO22Q8NEZ5 403 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 ZFAND1Q8TCF1 268 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 CLP1Q92989 425 aaKnown RBP13.04□□□□□ -0.32
USP49-201ENST00000373006 OR51B5Q9H339 312 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 TMEM161AQ9NX61 479 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 REV1Q9UBZ9 1251 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 TMCC3Q9ULS5 477 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 HEPACAM2A8MVW5 462 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 POLR1CO15160 346 aaPredicted RBP13.04□□□□□ -0.32
USP49-201ENST00000373006 SEMA7AO75326 666 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 PIPP12273 146 aaPredicted RBP13.04□□□□□ -0.32
USP49-201ENST00000373006 CKBP12277 381 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 ITGB7P26010 798 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 TIA1P31483 386 aaKnown RBP eCLIP13.04□□□□□ -0.32
USP49-201ENST00000373006 ETV5P41161 510 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 ETV1P50549 477 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 C2orf80Q0P641 193 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 NCF4Q15080 339 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 P2RY14Q15391 338 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 DDI2Q5TDH0 399 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 TRIM40Q6P9F5 258 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 CEACAM20Q6UY09 585 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 CBARPQ8N350 705 aaPredicted RBP13.04□□□□□ -0.32
USP49-201ENST00000373006 WFDC6Q9BQY6 131 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 KLF16Q9BXK1 252 aaPredicted RBP13.04□□□□□ -0.32
USP49-201ENST00000373006 GON7Q9BXV9 100 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 HDHD5Q9BXW7 423 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 B3GNT4Q9C0J1 378 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 RACGAP1Q9H0H5 632 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 EVA1BQ9NVM1 165 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.04□□□□□ -0.32
USP49-201ENST00000373006 SERTM1A2A2V5 107 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 SLC16A8O95907 504 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 OSMP13725 252 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 HMGA1P17096 107 aaKnown RBP13.04□□□□□ -0.32
USP49-201ENST00000373006 ALAS2P22557 587 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 SERPINA4P29622 427 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 ERP29P30040 261 aaKnown RBP13.04□□□□□ -0.32
USP49-201ENST00000373006 OPRD1P41143 372 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 BDKRB1P46663 353 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 CSNK1DP48730 415 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 XKP51811 444 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 ATN1P54259 1190 aaPredicted RBP13.04□□□□□ -0.32
USP49-201ENST00000373006 AP1S2P56377 157 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 MEF2AQ02078 507 aaPredicted RBP13.04□□□□□ -0.32
USP49-201ENST00000373006 EEF1A2Q05639 463 aaKnown RBP13.04□□□□□ -0.32
USP49-201ENST00000373006 CRHR2Q13324 411 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 MPPE1Q53F39 396 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 DEF8Q6ZN54 512 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 TMPRSS11BQ86T26 416 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 ESX1Q8N693 406 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 OR52P1PQ8NH57 321 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 C2orf49Q9BVC5 232 aaPredicted RBP13.04□□□□□ -0.32
USP49-201ENST00000373006 RSPO3Q9BXY4 272 aaPredicted RBP13.04□□□□□ -0.32
USP49-201ENST00000373006 LINC00597Q9H2U6 94 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 REEP4Q9H6H4 257 aa13.04□□□□□ -0.32
USP49-201ENST00000373006 ZNF821O75541 412 aaPredicted RBP13.03□□□□□ -0.32
USP49-201ENST00000373006 SLC2A2P11168 524 aaPredicted RBP13.03□□□□□ -0.32
USP49-201ENST00000373006 CTSOP43234 321 aaPredicted RBP13.03□□□□□ -0.32
USP49-201ENST00000373006 GSTM5P46439 218 aa13.03□□□□□ -0.32
USP49-201ENST00000373006 GZMKP49863 264 aa13.03□□□□□ -0.32
USP49-201ENST00000373006 RPS25P62851 125 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms