RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 NANOGP1Q8N7R0 232 aa14.1□□□□□ -0.15
COL9A2-202ENST00000372748 OR52N2Q8NGI0 321 aa14.1□□□□□ -0.15
COL9A2-202ENST00000372748 BRD9Q9H8M2 597 aa14.1□□□□□ -0.15
COL9A2-202ENST00000372748 NLKQ9UBE8 527 aa14.1□□□□□ -0.15
COL9A2-202ENST00000372748 MOSPD1Q9UJG1 213 aa14.1□□□□□ -0.15
COL9A2-202ENST00000372748 TMPRSS11EQ9UL52 423 aa14.1□□□□□ -0.15
COL9A2-202ENST00000372748 SPIN1Q9Y657 262 aaPredicted RBP14.1□□□□□ -0.15
COL9A2-202ENST00000372748 A0A1W2PQ72 361 aa14.1□□□□□ -0.15
COL9A2-202ENST00000372748 AGAP14A8MT82 685 aa14.1□□□□□ -0.15
COL9A2-202ENST00000372748 RNASET2O00584 256 aaKnown RBP14.1□□□□□ -0.15
COL9A2-202ENST00000372748 POLR1CO15160 346 aaPredicted RBP14.1□□□□□ -0.15
COL9A2-202ENST00000372748 PIPP12273 146 aaPredicted RBP14.1□□□□□ -0.15
COL9A2-202ENST00000372748 ZNF8P17098 575 aaPredicted RBP14.1□□□□□ -0.15
COL9A2-202ENST00000372748 TNNI3P19429 210 aa14.1□□□□□ -0.15
COL9A2-202ENST00000372748 ENDOUP21128 410 aaKnown RBP14.1□□□□□ -0.15
COL9A2-202ENST00000372748 ALAS2P22557 587 aa14.1□□□□□ -0.15
COL9A2-202ENST00000372748 GABRR2P28476 465 aa14.1□□□□□ -0.15
COL9A2-202ENST00000372748 WEE1P30291 646 aa14.1□□□□□ -0.15
COL9A2-202ENST00000372748 HMGA2P52926 109 aa14.1□□□□□ -0.15
COL9A2-202ENST00000372748 FLYWCH1Q4VC44 716 aa14.1□□□□□ -0.15
COL9A2-202ENST00000372748 ATAT1Q5SQI0 421 aa14.1□□□□□ -0.15
COL9A2-202ENST00000372748 DDI2Q5TDH0 399 aa14.1□□□□□ -0.15
COL9A2-202ENST00000372748 GDPGP1Q6ZNW5 385 aa14.1□□□□□ -0.15
COL9A2-202ENST00000372748 PDZD3Q86UT5 571 aa14.1□□□□□ -0.15
COL9A2-202ENST00000372748 PEX5LQ8IYB4 626 aa14.1□□□□□ -0.15
COL9A2-202ENST00000372748 CMTM8Q8IZV2 173 aa14.1□□□□□ -0.15
COL9A2-202ENST00000372748 OR7G3Q8NG95 312 aa14.1□□□□□ -0.15
COL9A2-202ENST00000372748 OR4M1Q8NGD0 313 aa14.1□□□□□ -0.15
COL9A2-202ENST00000372748 C1GALT1C1Q96EU7 318 aa14.1□□□□□ -0.15
COL9A2-202ENST00000372748 TM9SF2Q99805 663 aa14.1□□□□□ -0.15
COL9A2-202ENST00000372748 WRAP53Q9BUR4 548 aaKnown RBP14.1□□□□□ -0.15
COL9A2-202ENST00000372748 TVP23BQ9NYZ1 205 aa14.1□□□□□ -0.15
COL9A2-202ENST00000372748 TEKT2Q9UIF3 430 aa14.1□□□□□ -0.15
COL9A2-202ENST00000372748 TMCC3Q9ULS5 477 aa14.1□□□□□ -0.15
COL9A2-202ENST00000372748 HSPB11Q9Y547 144 aa14.1□□□□□ -0.15
COL9A2-202ENST00000372748 TSC22D2O75157 780 aa14.09□□□□□ -0.15
COL9A2-202ENST00000372748 SOCS5O75159 536 aa14.09□□□□□ -0.15
COL9A2-202ENST00000372748 EFEMP2O95967 443 aa14.09□□□□□ -0.15
COL9A2-202ENST00000372748 ALDH9A1P49189 494 aa14.09□□□□□ -0.15
COL9A2-202ENST00000372748 GZMKP49863 264 aa14.09□□□□□ -0.15
COL9A2-202ENST00000372748 EPHB3P54753 998 aa14.09□□□□□ -0.15
COL9A2-202ENST00000372748 C1DQ13901 141 aaKnown RBP14.09□□□□□ -0.15
COL9A2-202ENST00000372748 MPEG1Q2M385 716 aa14.09□□□□□ -0.15
COL9A2-202ENST00000372748 OR2G6Q5TZ20 316 aa14.09□□□□□ -0.15
COL9A2-202ENST00000372748 CASP12Q6UXS9 341 aa14.09□□□□□ -0.15
COL9A2-202ENST00000372748 TPRG1Q6ZUI0 275 aa14.09□□□□□ -0.15
COL9A2-202ENST00000372748 BTN2A2Q8WVV5 523 aa14.09□□□□□ -0.15
COL9A2-202ENST00000372748 ZNF717Q9BY31 904 aaPredicted RBP14.09□□□□□ -0.15
COL9A2-202ENST00000372748 HMX1Q9NP08 348 aaPredicted RBP14.09□□□□□ -0.15
COL9A2-202ENST00000372748 REV1Q9UBZ9 1251 aa14.09□□□□□ -0.15
COL9A2-202ENST00000372748 INSL5Q9Y5Q6 135 aa14.09□□□□□ -0.15
COL9A2-202ENST00000372748 ALPK3Q96L96 1907 aa14.09□□□□□ -0.15
COL9A2-202ENST00000372748 ARHGEF33A8MVX0 844 aa14.09□□□□□ -0.15
COL9A2-202ENST00000372748 TLX2O43763 284 aaPredicted RBP14.09□□□□□ -0.15
COL9A2-202ENST00000372748 SEMA7AO75326 666 aa14.09□□□□□ -0.15
COL9A2-202ENST00000372748 SOD2P04179 222 aa14.09□□□□□ -0.15
COL9A2-202ENST00000372748 RHCEP18577 417 aa14.09□□□□□ -0.15
COL9A2-202ENST00000372748 TIA1P31483 386 aaKnown RBP eCLIP14.09□□□□□ -0.15
COL9A2-202ENST00000372748 OPRD1P41143 372 aa14.09□□□□□ -0.15
COL9A2-202ENST00000372748 VEGFBP49765 207 aa14.09□□□□□ -0.15
COL9A2-202ENST00000372748 P2RY14Q15391 338 aa14.09□□□□□ -0.15
COL9A2-202ENST00000372748 MPPE1Q53F39 396 aa14.09□□□□□ -0.15
COL9A2-202ENST00000372748 RBM45Q8IUH3 476 aaKnown RBP14.09□□□□□ -0.15
COL9A2-202ENST00000372748 LILRA3Q8N6C8 439 aaPredicted RBP14.09□□□□□ -0.15
COL9A2-202ENST00000372748 GDPD1Q8N9F7 314 aa14.09□□□□□ -0.15
COL9A2-202ENST00000372748 FAM181AQ8N9Y4 354 aa14.09□□□□□ -0.15
COL9A2-202ENST00000372748 SCAMP4Q969E2 229 aa14.09□□□□□ -0.15
COL9A2-202ENST00000372748 VOPP1Q96AW1 172 aa14.09□□□□□ -0.15
COL9A2-202ENST00000372748 SCRN2Q96FV2 425 aa14.09□□□□□ -0.15
COL9A2-202ENST00000372748 MAP6Q96JE9 813 aa14.09□□□□□ -0.15
COL9A2-202ENST00000372748 IL21Q9HBE4 155 aa14.09□□□□□ -0.15
COL9A2-202ENST00000372748 ENOPH1Q9UHY7 261 aa14.09□□□□□ -0.15
COL9A2-202ENST00000372748 MAPRE3Q9UPY8 281 aa14.09□□□□□ -0.15
COL9A2-202ENST00000372748 SERTM1A2A2V5 107 aa14.08□□□□□ -0.15
COL9A2-202ENST00000372748 A8MVJ9 347 aa14.08□□□□□ -0.15
COL9A2-202ENST00000372748 HEPACAM2A8MVW5 462 aa14.08□□□□□ -0.15
COL9A2-202ENST00000372748 RFXAPO00287 272 aa14.08□□□□□ -0.15
COL9A2-202ENST00000372748 ARHGEF9O43307 516 aa14.08□□□□□ -0.15
COL9A2-202ENST00000372748 SLC2A2P11168 524 aaPredicted RBP14.08□□□□□ -0.15
COL9A2-202ENST00000372748 OSMP13725 252 aa14.08□□□□□ -0.15
COL9A2-202ENST00000372748 UQCRC1P31930 480 aa14.08□□□□□ -0.15
COL9A2-202ENST00000372748 ETV5P41161 510 aa14.08□□□□□ -0.15
COL9A2-202ENST00000372748 ETV1P50549 477 aa14.08□□□□□ -0.15
COL9A2-202ENST00000372748 C21orf58P58505 322 aa14.08□□□□□ -0.15
COL9A2-202ENST00000372748 EEF1A2Q05639 463 aaKnown RBP14.08□□□□□ -0.15
COL9A2-202ENST00000372748 C19orf57Q0VDD7 668 aa14.08□□□□□ -0.15
COL9A2-202ENST00000372748 PRSS53Q2L4Q9 553 aa14.08□□□□□ -0.15
COL9A2-202ENST00000372748 LCN1P1Q5VSP4 162 aa14.08□□□□□ -0.15
COL9A2-202ENST00000372748 TRIM40Q6P9F5 258 aa14.08□□□□□ -0.15
COL9A2-202ENST00000372748 AGTRAPQ6RW13 159 aa14.08□□□□□ -0.15
COL9A2-202ENST00000372748 CEACAM20Q6UY09 585 aa14.08□□□□□ -0.15
COL9A2-202ENST00000372748 MMP21Q8N119 569 aa14.08□□□□□ -0.15
COL9A2-202ENST00000372748 CBARPQ8N350 705 aaPredicted RBP14.08□□□□□ -0.15
COL9A2-202ENST00000372748 ZFP41Q8N8Y5 198 aa14.08□□□□□ -0.15
COL9A2-202ENST00000372748 OR52P1PQ8NH57 321 aa14.08□□□□□ -0.15
COL9A2-202ENST00000372748 TMEM169Q96HH4 297 aa14.08□□□□□ -0.15
COL9A2-202ENST00000372748 MSLNLQ96KJ4 702 aa14.08□□□□□ -0.15
COL9A2-202ENST00000372748 HDHD5Q9BXW7 423 aa14.08□□□□□ -0.15
COL9A2-202ENST00000372748 RACGAP1Q9H0H5 632 aa14.08□□□□□ -0.15
COL9A2-202ENST00000372748 SUV39H2Q9H5I1 410 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms