RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 HDAC2Q92769 488 aaKnown RBP16.26■□□□□ 0.19
VEGFA-205ENST00000372067 YTHDF1Q9BYJ9 559 aaKnown RBP16.26■□□□□ 0.19
VEGFA-205ENST00000372067 SP140LQ9H930 580 aa16.26■□□□□ 0.19
VEGFA-205ENST00000372067 NFKBIL1Q9UBC1 381 aaPredicted RBP16.26■□□□□ 0.19
VEGFA-205ENST00000372067 M0R3G1 203 aa16.26■□□□□ 0.19
VEGFA-205ENST00000372067 PDPK1O15530 556 aa16.26■□□□□ 0.19
VEGFA-205ENST00000372067 LINC01565O15544 149 aa16.26■□□□□ 0.19
VEGFA-205ENST00000372067 MFN2O95140 757 aa16.26■□□□□ 0.19
VEGFA-205ENST00000372067 VIPP01282 170 aa16.26■□□□□ 0.19
VEGFA-205ENST00000372067 TUBA3CQ13748 450 aa16.26■□□□□ 0.19
VEGFA-205ENST00000372067 SMN1Q16637 294 aaKnown RBP16.26■□□□□ 0.19
VEGFA-205ENST00000372067 CTU2Q2VPK5 515 aaKnown RBP16.26■□□□□ 0.19
VEGFA-205ENST00000372067 CBLL1Q75N03 491 aa16.26■□□□□ 0.19
VEGFA-205ENST00000372067 FAM129CQ86XR2 697 aa16.26■□□□□ 0.19
VEGFA-205ENST00000372067 UBE2FQ969M7 185 aa16.26■□□□□ 0.19
VEGFA-205ENST00000372067 DOHHQ9BU89 302 aa16.26■□□□□ 0.19
VEGFA-205ENST00000372067 BHLHE41Q9C0J9 482 aaPredicted RBP16.26■□□□□ 0.19
VEGFA-205ENST00000372067 LHPPQ9H008 270 aa16.26■□□□□ 0.19
VEGFA-205ENST00000372067 EPHX3Q9H6B9 360 aa16.26■□□□□ 0.19
VEGFA-205ENST00000372067 POLMQ9NP87 494 aaPredicted RBP16.26■□□□□ 0.19
VEGFA-205ENST00000372067 CTPS2Q9NRF8 586 aa16.26■□□□□ 0.19
VEGFA-205ENST00000372067 DUSP12Q9UNI6 340 aa16.26■□□□□ 0.19
VEGFA-205ENST00000372067 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.25■□□□□ 0.19
VEGFA-205ENST00000372067 CACNB4O00305 520 aaPredicted RBP16.25■□□□□ 0.19
VEGFA-205ENST00000372067 SLC1A7O00341 560 aa16.25■□□□□ 0.19
VEGFA-205ENST00000372067 SLC28A2O43868 658 aa16.25■□□□□ 0.19
VEGFA-205ENST00000372067 C9P02748 559 aa16.25■□□□□ 0.19
VEGFA-205ENST00000372067 DBTP11182 482 aaKnown RBP16.25■□□□□ 0.19
VEGFA-205ENST00000372067 ACADMP11310 421 aa16.25■□□□□ 0.19
VEGFA-205ENST00000372067 PCSK2P16519 638 aa16.25■□□□□ 0.19
VEGFA-205ENST00000372067 CRHBPP24387 322 aa16.25■□□□□ 0.19
VEGFA-205ENST00000372067 PTPN6P29350 595 aa16.25■□□□□ 0.19
VEGFA-205ENST00000372067 DAPP51397 102 aa16.25■□□□□ 0.19
VEGFA-205ENST00000372067 NUDT6P53370 316 aa16.25■□□□□ 0.19
VEGFA-205ENST00000372067 ZNF33BQ06732 778 aa16.25■□□□□ 0.19
VEGFA-205ENST00000372067 HEPACAMQ14CZ8 416 aa16.25■□□□□ 0.19
VEGFA-205ENST00000372067 RPS26P11Q5JNZ5 115 aaPredicted RBP16.25■□□□□ 0.19
VEGFA-205ENST00000372067 UNC5DQ6UXZ4 953 aa16.25■□□□□ 0.19
VEGFA-205ENST00000372067 ARMC8Q8IUR7 673 aa16.25■□□□□ 0.19
VEGFA-205ENST00000372067 OR10G2Q8NGC3 310 aa16.25■□□□□ 0.19
VEGFA-205ENST00000372067 GIMAP5Q96F15 307 aa16.25■□□□□ 0.19
VEGFA-205ENST00000372067 RDH12Q96NR8 316 aa16.25■□□□□ 0.19
VEGFA-205ENST00000372067 QRFPRQ96P65 431 aa16.25■□□□□ 0.19
VEGFA-205ENST00000372067 UQCC2Q9BRT2 126 aa16.25■□□□□ 0.19
VEGFA-205ENST00000372067 GDE1Q9NZC3 331 aa16.25■□□□□ 0.19
VEGFA-205ENST00000372067 TMEM9Q9P0T7 183 aa16.25■□□□□ 0.19
VEGFA-205ENST00000372067 THAP10Q9P2Z0 257 aaPredicted RBP16.25■□□□□ 0.19
VEGFA-205ENST00000372067 MSRAQ9UJ68 235 aa16.25■□□□□ 0.19
VEGFA-205ENST00000372067 GPR37L1O60883 481 aa16.25■□□□□ 0.19
VEGFA-205ENST00000372067 TMBIM6P55061 237 aa16.25■□□□□ 0.19
VEGFA-205ENST00000372067 RAB8AP61006 207 aa16.25■□□□□ 0.19
VEGFA-205ENST00000372067 TMEM52BQ4KMG9 183 aa16.25■□□□□ 0.19
VEGFA-205ENST00000372067 TMEM31Q5JXX7 168 aa16.25■□□□□ 0.19
VEGFA-205ENST00000372067 RSBN1Q5VWQ0 802 aaPredicted RBP16.25■□□□□ 0.19
VEGFA-205ENST00000372067 PARM1Q6UWI2 310 aa16.25■□□□□ 0.19
VEGFA-205ENST00000372067 ZNF765Q7L2R6 523 aa16.25■□□□□ 0.19
VEGFA-205ENST00000372067 NLRP8Q86W28 1048 aa16.25■□□□□ 0.19
VEGFA-205ENST00000372067 PROX1Q92786 737 aa16.25■□□□□ 0.19
VEGFA-205ENST00000372067 COL26A1Q96A83 441 aa16.25■□□□□ 0.19
VEGFA-205ENST00000372067 ABCG4Q9H172 646 aa16.25■□□□□ 0.19
VEGFA-205ENST00000372067 EQTNQ9NQ60 294 aa16.25■□□□□ 0.19
VEGFA-205ENST00000372067 PCDHGB3Q9Y5G1 929 aa16.25■□□□□ 0.19
VEGFA-205ENST00000372067 TRBC2A0A5B9 178 aa16.25■□□□□ 0.19
VEGFA-205ENST00000372067 TPST2O60704 377 aa16.25■□□□□ 0.19
VEGFA-205ENST00000372067 SCN2BO60939 215 aa16.25■□□□□ 0.19
VEGFA-205ENST00000372067 FURINP09958 794 aa16.25■□□□□ 0.19
VEGFA-205ENST00000372067 HSMCR30P0CW71 290 aa16.25■□□□□ 0.19
VEGFA-205ENST00000372067 C8orf89P0DMQ9 161 aa16.25■□□□□ 0.19
VEGFA-205ENST00000372067 OR3A3P47888 321 aa16.25■□□□□ 0.19
VEGFA-205ENST00000372067 ZNF776Q68DI1 518 aaPredicted RBP16.25■□□□□ 0.19
VEGFA-205ENST00000372067 LGI4Q8N135 537 aa16.25■□□□□ 0.19
VEGFA-205ENST00000372067 SETD7Q8WTS6 366 aaKnown RBP16.25■□□□□ 0.19
VEGFA-205ENST00000372067 RAD21L1Q9H4I0 556 aa16.25■□□□□ 0.19
VEGFA-205ENST00000372067 HMG20AQ9NP66 347 aa16.25■□□□□ 0.19
VEGFA-205ENST00000372067 SLC13A4Q9UKG4 626 aa16.25■□□□□ 0.19
VEGFA-205ENST00000372067 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.25■□□□□ 0.193e-7■■□□□ 12.6
VEGFA-205ENST00000372067 CA5BQ9Y2D0 317 aa16.25■□□□□ 0.19
VEGFA-205ENST00000372067 C17orf113A0A1B0GUU1 675 aa16.24■□□□□ 0.19
VEGFA-205ENST00000372067 RNASET2O00584 256 aaKnown RBP16.24■□□□□ 0.19
VEGFA-205ENST00000372067 NR2F1P10589 423 aa16.24■□□□□ 0.19
VEGFA-205ENST00000372067 KHDRBS2Q5VWX1 349 aaKnown RBP16.24■□□□□ 0.19
VEGFA-205ENST00000372067 GTF2IRD2BQ6EKJ0 949 aa16.24■□□□□ 0.19
VEGFA-205ENST00000372067 GTF2IRD2Q86UP8 949 aa16.24■□□□□ 0.19
VEGFA-205ENST00000372067 SGPP1Q9BX95 441 aa16.24■□□□□ 0.19
VEGFA-205ENST00000372067 ALOXE3Q9BYJ1 711 aa16.24■□□□□ 0.19
VEGFA-205ENST00000372067 OR52A5Q9H2C5 316 aa16.24■□□□□ 0.19
VEGFA-205ENST00000372067 GPN2Q9H9Y4 310 aaPredicted RBP16.24■□□□□ 0.19
VEGFA-205ENST00000372067 STMN3Q9NZ72 180 aa16.24■□□□□ 0.19
VEGFA-205ENST00000372067 ZNF639Q9UID6 485 aa16.24■□□□□ 0.19
VEGFA-205ENST00000372067 TMCC3Q9ULS5 477 aa16.24■□□□□ 0.19
VEGFA-205ENST00000372067 YBX2Q9Y2T7 364 aaKnown RBP16.24■□□□□ 0.19
VEGFA-205ENST00000372067 PRAMEF33A0A0G2JMD5 474 aa16.24■□□□□ 0.19
VEGFA-205ENST00000372067 SYNDIG1LA6NDD5 238 aa16.24■□□□□ 0.19
VEGFA-205ENST00000372067 ATP6V1G2-DDX39BF2Z307 99 aa16.24■□□□□ 0.19
VEGFA-205ENST00000372067 INMTO95050 263 aa16.24■□□□□ 0.19
VEGFA-205ENST00000372067 EPHA2P29317 976 aa16.24■□□□□ 0.19
VEGFA-205ENST00000372067 PKLRP30613 574 aa16.24■□□□□ 0.19
VEGFA-205ENST00000372067 SERPINB1P30740 379 aa16.24■□□□□ 0.19
VEGFA-205ENST00000372067 GZMMP51124 257 aa16.24■□□□□ 0.19
VEGFA-205ENST00000372067 RPP38P78345 283 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms