RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 TMEM229AB2RXF0 380 aa16.55■□□□□ 0.24
SSBP3-203ENST00000371319 LAMTOR5O43504 91 aa16.55■□□□□ 0.24
SSBP3-203ENST00000371319 DENRO43583 198 aaKnown RBP16.55■□□□□ 0.24
SSBP3-203ENST00000371319 DEAF1O75398 565 aaPredicted RBP16.55■□□□□ 0.24
SSBP3-203ENST00000371319 C8orf89P0DMQ9 161 aa16.55■□□□□ 0.24
SSBP3-203ENST00000371319 HOXB6P17509 224 aaKnown RBP16.55■□□□□ 0.24
SSBP3-203ENST00000371319 CSNK2A2P19784 350 aaPredicted RBP16.55■□□□□ 0.24
SSBP3-203ENST00000371319 ZNF10P21506 573 aaPredicted RBP16.55■□□□□ 0.24
SSBP3-203ENST00000371319 CPN2P22792 545 aa16.55■□□□□ 0.24
SSBP3-203ENST00000371319 MAGEA2P43356 314 aa16.55■□□□□ 0.24
SSBP3-203ENST00000371319 HSPA13P48723 471 aa16.55■□□□□ 0.24
SSBP3-203ENST00000371319 CCT3P49368 545 aaKnown RBP16.55■□□□□ 0.24
SSBP3-203ENST00000371319 GFERP55789 205 aa16.55■□□□□ 0.24
SSBP3-203ENST00000371319 DSTNP60981 165 aa16.55■□□□□ 0.24
SSBP3-203ENST00000371319 CSTF1Q05048 431 aaKnown RBP16.55■□□□□ 0.24
SSBP3-203ENST00000371319 SPDYE7PQ495Y7 208 aa16.55■□□□□ 0.24
SSBP3-203ENST00000371319 TMTC4Q5T4D3 741 aa16.55■□□□□ 0.24
SSBP3-203ENST00000371319 CCDC80Q76M96 950 aa16.55■□□□□ 0.24
SSBP3-203ENST00000371319 CBR4Q8N4T8 237 aa16.55■□□□□ 0.24
SSBP3-203ENST00000371319 HORMAD2Q8N7B1 307 aa16.55■□□□□ 0.24
SSBP3-203ENST00000371319 VPS50Q96JG6 964 aa16.55■□□□□ 0.24
SSBP3-203ENST00000371319 CSF3RQ99062 836 aa16.55■□□□□ 0.24
SSBP3-203ENST00000371319 CCDC3Q9BQI4 270 aa16.55■□□□□ 0.24
SSBP3-203ENST00000371319 BDH2Q9BUT1 245 aa16.55■□□□□ 0.24
SSBP3-203ENST00000371319 SERHL2Q9H4I8 314 aa16.55■□□□□ 0.24
SSBP3-203ENST00000371319 LYRM4Q9HD34 91 aa16.55■□□□□ 0.24
SSBP3-203ENST00000371319 STARD5Q9NSY2 213 aa16.55■□□□□ 0.24
SSBP3-203ENST00000371319 ZSCAN32Q9NX65 697 aa16.55■□□□□ 0.24
SSBP3-203ENST00000371319 DNAJB9Q9UBS3 223 aa16.55■□□□□ 0.24
SSBP3-203ENST00000371319 PADI4Q9UM07 663 aa16.55■□□□□ 0.24
SSBP3-203ENST00000371319 GOLGA4Q13439 2230 aaKnown RBP16.54■□□□□ 0.24
SSBP3-203ENST00000371319 ZNF860A6NHJ4 632 aa16.54■□□□□ 0.24
SSBP3-203ENST00000371319 KIF1CO43896 1103 aaKnown RBP16.54■□□□□ 0.24
SSBP3-203ENST00000371319 GALR3O60755 368 aaPredicted RBP16.54■□□□□ 0.24
SSBP3-203ENST00000371319 RASAL1O95294 804 aa16.54■□□□□ 0.24
SSBP3-203ENST00000371319 PTGER1P34995 402 aa16.54■□□□□ 0.24
SSBP3-203ENST00000371319 FEN1P39748 380 aaKnown RBP16.54■□□□□ 0.24
SSBP3-203ENST00000371319 BUD31P41223 144 aaPredicted RBP16.54■□□□□ 0.24
SSBP3-203ENST00000371319 GABRA4P48169 554 aa16.54■□□□□ 0.24
SSBP3-203ENST00000371319 RXRGP48443 463 aa16.54■□□□□ 0.24
SSBP3-203ENST00000371319 PRIM2P49643 509 aa16.54■□□□□ 0.24
SSBP3-203ENST00000371319 RPS26P62854 115 aaKnown RBP16.54■□□□□ 0.24
SSBP3-203ENST00000371319 OLR1P78380 273 aa16.54■□□□□ 0.24
SSBP3-203ENST00000371319 CDK6Q00534 326 aa16.54■□□□□ 0.24
SSBP3-203ENST00000371319 ZNF630Q2M218 657 aaPredicted RBP16.54■□□□□ 0.24
SSBP3-203ENST00000371319 ZC3H12BQ5HYM0 836 aaKnown RBP16.54■□□□□ 0.24
SSBP3-203ENST00000371319 TMEM64Q6YI46 380 aa16.54■□□□□ 0.24
SSBP3-203ENST00000371319 CCDC116Q8IYX3 515 aa16.54■□□□□ 0.24
SSBP3-203ENST00000371319 SHISA5Q8N114 240 aa16.54■□□□□ 0.24
SSBP3-203ENST00000371319 ARL10Q8N8L6 244 aa16.54■□□□□ 0.24
SSBP3-203ENST00000371319 SFXN5Q8TD22 340 aa16.54■□□□□ 0.24
SSBP3-203ENST00000371319 TCTN2Q96GX1 697 aa16.54■□□□□ 0.24
SSBP3-203ENST00000371319 HSH2DQ96JZ2 352 aa16.54■□□□□ 0.24
SSBP3-203ENST00000371319 ELF4Q99607 663 aaPredicted RBP16.54■□□□□ 0.24
SSBP3-203ENST00000371319 RAB33BQ9H082 229 aa16.54■□□□□ 0.24
SSBP3-203ENST00000371319 PRDM9Q9NQV7 894 aa16.54■□□□□ 0.24
SSBP3-203ENST00000371319 LRIT1Q9P2V4 623 aa16.54■□□□□ 0.24
SSBP3-203ENST00000371319 PILRBQ9UKJ0 227 aa16.54■□□□□ 0.24
SSBP3-203ENST00000371319 SLC22A7Q9Y694 548 aa16.54■□□□□ 0.24
SSBP3-203ENST00000371319 AP4B1Q9Y6B7 739 aa16.54■□□□□ 0.24
SSBP3-203ENST00000371319 KNL1Q8NG31 2342 aa16.54■□□□□ 0.24
SSBP3-203ENST00000371319 GNSP15586 552 aa16.53■□□□□ 0.24
SSBP3-203ENST00000371319 AQP1P29972 269 aa16.53■□□□□ 0.24
SSBP3-203ENST00000371319 GPC1P35052 558 aa16.53■□□□□ 0.24
SSBP3-203ENST00000371319 COL9A2Q14055 689 aaPredicted RBP16.53■□□□□ 0.24
SSBP3-203ENST00000371319 SPIDRQ14159 915 aa16.53■□□□□ 0.24
SSBP3-203ENST00000371319 PRTGQ2VWP7 1150 aa16.53■□□□□ 0.24
SSBP3-203ENST00000371319 PLK5Q496M5 336 aa16.53■□□□□ 0.24
SSBP3-203ENST00000371319 CYBRD1Q53TN4 286 aa16.53■□□□□ 0.24
SSBP3-203ENST00000371319 C6orf52Q5T4I8 152 aa16.53■□□□□ 0.24
SSBP3-203ENST00000371319 NKAIN2Q5VXU1 208 aa16.53■□□□□ 0.24
SSBP3-203ENST00000371319 OR52E8Q6IFG1 317 aa16.53■□□□□ 0.24
SSBP3-203ENST00000371319 TBPL2Q6SJ96 375 aa16.53■□□□□ 0.24
SSBP3-203ENST00000371319 CEACAM20Q6UY09 585 aa16.53■□□□□ 0.24
SSBP3-203ENST00000371319 FKBP9P1Q75LS8 142 aa16.53■□□□□ 0.24
SSBP3-203ENST00000371319 VTCN1Q7Z7D3 282 aa16.53■□□□□ 0.24
SSBP3-203ENST00000371319 C11orf74Q86VG3 221 aa16.53■□□□□ 0.24
SSBP3-203ENST00000371319 ZC3H7AQ8IWR0 971 aaKnown RBP16.53■□□□□ 0.24
SSBP3-203ENST00000371319 SLC35F3Q8IY50 421 aa16.53■□□□□ 0.24
SSBP3-203ENST00000371319 TMBIM1Q969X1 311 aa16.53■□□□□ 0.24
SSBP3-203ENST00000371319 TGM7Q96PF1 710 aa16.53■□□□□ 0.24
SSBP3-203ENST00000371319 A4GALTQ9NPC4 353 aa16.53■□□□□ 0.24
SSBP3-203ENST00000371319 C8orf4Q9NR00 106 aa16.53■□□□□ 0.24
SSBP3-203ENST00000371319 GIMAP4Q9NUV9 329 aa16.53■□□□□ 0.24
SSBP3-203ENST00000371319 EPHA6Q9UF33 1036 aa16.53■□□□□ 0.24
SSBP3-203ENST00000371319 NAALAD2Q9Y3Q0 740 aa16.53■□□□□ 0.24
SSBP3-203ENST00000371319 PCDH15Q96QU1 1955 aa16.52■□□□□ 0.24
SSBP3-203ENST00000371319 TLCD2A6NGC4 264 aa16.52■□□□□ 0.24
SSBP3-203ENST00000371319 DLGAP1O14490 977 aa16.52■□□□□ 0.24
SSBP3-203ENST00000371319 TXNDC9O14530 226 aa16.52■□□□□ 0.24
SSBP3-203ENST00000371319 CST1P01037 141 aa16.52■□□□□ 0.24
SSBP3-203ENST00000371319 ALPPL2P10696 532 aa16.52■□□□□ 0.24
SSBP3-203ENST00000371319 PCBP3P57721 371 aaKnown RBP16.52■□□□□ 0.24
SSBP3-203ENST00000371319 OR1D5P58170 312 aa16.52■□□□□ 0.24
SSBP3-203ENST00000371319 MYBPC3Q14896 1274 aa16.52■□□□□ 0.24
SSBP3-203ENST00000371319 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.52■□□□□ 0.24
SSBP3-203ENST00000371319 TNFAIP8L2Q6P589 184 aaPredicted RBP16.52■□□□□ 0.24
SSBP3-203ENST00000371319 KANSL1Q7Z3B3 1105 aa16.52■□□□□ 0.24
SSBP3-203ENST00000371319 ZDHHC21Q8IVQ6 265 aa16.52■□□□□ 0.24
SSBP3-203ENST00000371319 C1orf210Q8IVY1 113 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms