RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 IMP3Q9NV31 184 aaKnown RBP12.2□□□□□ -0.46
GPC3-201ENST00000370818 VPS4AQ9UN37 437 aa12.2□□□□□ -0.46
GPC3-201ENST00000370818 ABCG2Q9UNQ0 655 aa12.2□□□□□ -0.46
GPC3-201ENST00000370818 DNAH14Q0VDD8 3507 aa12.19□□□□□ -0.46
GPC3-201ENST00000370818 TBC1D3DA0A087WVF3 549 aa12.19□□□□□ -0.46
GPC3-201ENST00000370818 TBC1D3IA0A087WXS9 549 aa12.19□□□□□ -0.46
GPC3-201ENST00000370818 TBC1D3EA0A087X179 549 aa12.19□□□□□ -0.46
GPC3-201ENST00000370818 TBC1D3KA0A087X1G2 549 aa12.19□□□□□ -0.46
GPC3-201ENST00000370818 IGKV1-8A0A0C4DH67 115 aa12.19□□□□□ -0.46
GPC3-201ENST00000370818 TBC1D3FA6NER0 549 aaPredicted RBP12.19□□□□□ -0.46
GPC3-201ENST00000370818 OR52A4PA6NMU1 304 aa12.19□□□□□ -0.46
GPC3-201ENST00000370818 TBC1D3LB9A6J9 549 aa12.19□□□□□ -0.46
GPC3-201ENST00000370818 ERVH48-1M5A8F1 160 aa12.19□□□□□ -0.46
GPC3-201ENST00000370818 SLC31A1O15431 190 aa12.19□□□□□ -0.46
GPC3-201ENST00000370818 NOBOXO60393 691 aa12.19□□□□□ -0.46
GPC3-201ENST00000370818 GPR37L1O60883 481 aa12.19□□□□□ -0.46
GPC3-201ENST00000370818 TBC1D3HP0C7X1 549 aa12.19□□□□□ -0.46
GPC3-201ENST00000370818 HOXB6P17509 224 aaKnown RBP12.19□□□□□ -0.46
GPC3-201ENST00000370818 M6PRP20645 277 aa12.19□□□□□ -0.46
GPC3-201ENST00000370818 MRPS15P82914 257 aaKnown RBP12.19□□□□□ -0.46
GPC3-201ENST00000370818 REEP5Q00765 189 aa12.19□□□□□ -0.46
GPC3-201ENST00000370818 COX20Q5RI15 118 aa12.19□□□□□ -0.46
GPC3-201ENST00000370818 TBC1D3GQ6DHY5 549 aa12.19□□□□□ -0.46
GPC3-201ENST00000370818 TBC1D3CQ6IPX1 549 aa12.19□□□□□ -0.46
GPC3-201ENST00000370818 SDE2Q6IQ49 451 aa12.19□□□□□ -0.46
GPC3-201ENST00000370818 SPESP1Q6UW49 350 aa12.19□□□□□ -0.46
GPC3-201ENST00000370818 LYPD8Q6UX82 237 aa12.19□□□□□ -0.46
GPC3-201ENST00000370818 SPATC1Q76KD6 591 aa12.19□□□□□ -0.46
GPC3-201ENST00000370818 ZDHHC21Q8IVQ6 265 aa12.19□□□□□ -0.46
GPC3-201ENST00000370818 ADGRF3Q8IZF5 1079 aa12.19□□□□□ -0.46
GPC3-201ENST00000370818 TBC1D3Q8IZP1 549 aaPredicted RBP12.19□□□□□ -0.46
GPC3-201ENST00000370818 CELF2-AS1Q8N7Q2 184 aa12.19□□□□□ -0.46
GPC3-201ENST00000370818 FAM83FQ8NEG4 500 aaPredicted RBP12.19□□□□□ -0.46
GPC3-201ENST00000370818 SDCCAG3Q96C92 435 aa12.19□□□□□ -0.46
GPC3-201ENST00000370818 YIPF6Q96EC8 236 aa12.19□□□□□ -0.46
GPC3-201ENST00000370818 MSLNLQ96KJ4 702 aa12.19□□□□□ -0.46
GPC3-201ENST00000370818 CAMK1GQ96NX5 476 aa12.19□□□□□ -0.46
GPC3-201ENST00000370818 F2RL3Q96RI0 385 aa12.19□□□□□ -0.46
GPC3-201ENST00000370818 XKR8Q9H6D3 395 aa12.19□□□□□ -0.46
GPC3-201ENST00000370818 ADPRHL2Q9NX46 363 aa12.19□□□□□ -0.46
GPC3-201ENST00000370818 USE1Q9NZ43 259 aa12.19□□□□□ -0.46
GPC3-201ENST00000370818 SPASTQ9UBP0 616 aa12.19□□□□□ -0.46
GPC3-201ENST00000370818 U3KQV3 271 aa12.19□□□□□ -0.46
GPC3-201ENST00000370818 PRAMEF33A0A0G2JMD5 474 aa12.19□□□□□ -0.46
GPC3-201ENST00000370818 ANKDD1BA6NHY2 528 aa12.19□□□□□ -0.46
GPC3-201ENST00000370818 SAGE2PA6NJ88 616 aa12.19□□□□□ -0.46
GPC3-201ENST00000370818 SCAMP1O15126 338 aa12.19□□□□□ -0.46
GPC3-201ENST00000370818 GCM2O75603 506 aaPredicted RBP12.19□□□□□ -0.46
GPC3-201ENST00000370818 PRKACGP22612 351 aa12.19□□□□□ -0.46
GPC3-201ENST00000370818 PPIBP23284 216 aaKnown RBP12.19□□□□□ -0.46
GPC3-201ENST00000370818 CD47Q08722 323 aa12.19□□□□□ -0.46
GPC3-201ENST00000370818 CBLL1Q75N03 491 aa12.19□□□□□ -0.46
GPC3-201ENST00000370818 PJA1Q8NG27 643 aa12.19□□□□□ -0.46
GPC3-201ENST00000370818 MTERF3Q96E29 417 aa12.19□□□□□ -0.46
GPC3-201ENST00000370818 DEPDC7Q96QD5 511 aa12.19□□□□□ -0.46
GPC3-201ENST00000370818 SPATA9Q9BWV2 254 aa12.19□□□□□ -0.46
GPC3-201ENST00000370818 SLC6A16Q9GZN6 736 aa12.19□□□□□ -0.46
GPC3-201ENST00000370818 TOR3AQ9H497 397 aa12.19□□□□□ -0.46
GPC3-201ENST00000370818 CD93Q9NPY3 652 aa12.19□□□□□ -0.46
GPC3-201ENST00000370818 DDX28Q9NUL7 540 aaKnown RBP12.19□□□□□ -0.46
GPC3-201ENST00000370818 FAM118AQ9NWS6 357 aa12.19□□□□□ -0.46
GPC3-201ENST00000370818 CORO2BQ9UQ03 480 aa12.19□□□□□ -0.46
GPC3-201ENST00000370818 TMEM229AB2RXF0 380 aa12.18□□□□□ -0.46
GPC3-201ENST00000370818 SEMA3DO95025 777 aa12.18□□□□□ -0.46
GPC3-201ENST00000370818 FKBP9O95302 570 aa12.18□□□□□ -0.46
GPC3-201ENST00000370818 BSGP35613 385 aa12.18□□□□□ -0.46
GPC3-201ENST00000370818 RPL3P39023 403 aaKnown RBP12.18□□□□□ -0.46
GPC3-201ENST00000370818 RAB28P51157 221 aa12.18□□□□□ -0.46
GPC3-201ENST00000370818 CASP9P55211 416 aa12.18□□□□□ -0.46
GPC3-201ENST00000370818 VLDLRP98155 873 aa12.18□□□□□ -0.46
GPC3-201ENST00000370818 TTC23Q5W5X9 447 aa12.18□□□□□ -0.46
GPC3-201ENST00000370818 IKBIPQ70UQ0 350 aa12.18□□□□□ -0.46
GPC3-201ENST00000370818 EIF3MQ7L2H7 374 aaKnown RBP12.18□□□□□ -0.46
GPC3-201ENST00000370818 PRSS48Q7RTY5 328 aa12.18□□□□□ -0.46
GPC3-201ENST00000370818 GATAD2AQ86YP4 633 aa12.18□□□□□ -0.46
GPC3-201ENST00000370818 OR2A1Q8NGT9 310 aa12.18□□□□□ -0.46
GPC3-201ENST00000370818 OR5K1Q8NHB7 308 aa12.18□□□□□ -0.46
GPC3-201ENST00000370818 SCARF2Q96GP6 870 aaPredicted RBP12.18□□□□□ -0.46
GPC3-201ENST00000370818 MBOAT4Q96T53 435 aa12.18□□□□□ -0.46
GPC3-201ENST00000370818 RBM4BQ9BQ04 359 aaKnown RBP12.18□□□□□ -0.46
GPC3-201ENST00000370818 RBM4Q9BWF3 364 aaKnown RBP12.18□□□□□ -0.46
GPC3-201ENST00000370818 ASPSCR1Q9BZE9 553 aa12.18□□□□□ -0.46
GPC3-201ENST00000370818 CCDC90BQ9GZT6 254 aa12.18□□□□□ -0.46
GPC3-201ENST00000370818 FBRSQ9HAH7 460 aa12.18□□□□□ -0.46
GPC3-201ENST00000370818 FGF22Q9HCT0 170 aa12.18□□□□□ -0.46
GPC3-201ENST00000370818 LHX9Q9NQ69 397 aa12.18□□□□□ -0.46
GPC3-201ENST00000370818 PRDM8Q9NQV8 689 aa12.18□□□□□ -0.46
GPC3-201ENST00000370818 TAAR2Q9P1P5 351 aa12.18□□□□□ -0.46
GPC3-201ENST00000370818 RAPGEFL1Q9UHV5 662 aa12.18□□□□□ -0.46
GPC3-201ENST00000370818 ACSL6Q9UKU0 697 aa12.18□□□□□ -0.46
GPC3-201ENST00000370818 PCDHGB1Q9Y5G3 927 aa12.18□□□□□ -0.46
GPC3-201ENST00000370818 MN1Q10571 1320 aaPredicted RBP12.18□□□□□ -0.46
GPC3-201ENST00000370818 POM121BA6NF01 834 aa12.18□□□□□ -0.46
GPC3-201ENST00000370818 CENPXA8MT69 81 aa12.18□□□□□ -0.46
GPC3-201ENST00000370818 LCMT2O60294 686 aaKnown RBP12.18□□□□□ -0.46
GPC3-201ENST00000370818 PIGAP37287 484 aa12.18□□□□□ -0.46
GPC3-201ENST00000370818 HTR3AP46098 478 aa12.18□□□□□ -0.46
GPC3-201ENST00000370818 CSNK1G2P78368 415 aa12.18□□□□□ -0.46
GPC3-201ENST00000370818 PRDX1Q06830 199 aaKnown RBP12.18□□□□□ -0.46
GPC3-201ENST00000370818 DUSP7Q16829 419 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms