RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 ANKRD9Q96BM1 317 aaPredicted RBP14.13□□□□□ -0.15
SSR4-204ENST00000370087 SPACA9Q96E40 222 aaPredicted RBP14.13□□□□□ -0.15
SSR4-204ENST00000370087 JSRP1Q96MG2 331 aaPredicted RBP14.13□□□□□ -0.15
SSR4-204ENST00000370087 SERINC2Q96SA4 455 aa14.13□□□□□ -0.15
SSR4-204ENST00000370087 TIMP4Q99727 224 aa14.13□□□□□ -0.15
SSR4-204ENST00000370087 TRIM54Q9BYV2 358 aa14.13□□□□□ -0.15
SSR4-204ENST00000370087 PLAC1Q9HBJ0 212 aa14.13□□□□□ -0.15
SSR4-204ENST00000370087 JKAMPQ9P055 326 aa14.13□□□□□ -0.15
SSR4-204ENST00000370087 ZNF629Q9UEG4 869 aaPredicted RBP14.13□□□□□ -0.15
SSR4-204ENST00000370087 FOXD3Q9UJU5 478 aaPredicted RBP14.13□□□□□ -0.15
SSR4-204ENST00000370087 CNOT11Q9UKZ1 510 aaKnown RBP14.13□□□□□ -0.15
SSR4-204ENST00000370087 BOKQ9UMX3 212 aaPredicted RBP14.13□□□□□ -0.15
SSR4-204ENST00000370087 CHCHD2Q9Y6H1 151 aaPredicted RBP14.13□□□□□ -0.15
SSR4-204ENST00000370087 COL6A5A8TX70 2615 aa14.12□□□□□ -0.15
SSR4-204ENST00000370087 TLN2Q9Y4G6 2542 aa14.12□□□□□ -0.15
SSR4-204ENST00000370087 EEF1E1-BLOC1S5C9J1V9 151 aa14.12□□□□□ -0.15
SSR4-204ENST00000370087 INAFM1C9JVW0 142 aa14.12□□□□□ -0.15
SSR4-204ENST00000370087 SMAD7O15105 426 aaKnown RBP14.12□□□□□ -0.15
SSR4-204ENST00000370087 EEF1E1O43324 174 aaKnown RBP14.12□□□□□ -0.15
SSR4-204ENST00000370087 WDR47O94967 919 aa14.12□□□□□ -0.15
SSR4-204ENST00000370087 C1GALT1C1LP0DN25 315 aa14.12□□□□□ -0.15
SSR4-204ENST00000370087 STX4Q12846 297 aa14.12□□□□□ -0.15
SSR4-204ENST00000370087 UBE3DQ7Z6J8 389 aa14.12□□□□□ -0.15
SSR4-204ENST00000370087 CNTN4Q8IWV2 1026 aa14.12□□□□□ -0.15
SSR4-204ENST00000370087 LIX1Q8N485 282 aa14.12□□□□□ -0.15
SSR4-204ENST00000370087 GPATCH11Q8N954 259 aa14.12□□□□□ -0.15
SSR4-204ENST00000370087 NAT8LQ8N9F0 302 aa14.12□□□□□ -0.15
SSR4-204ENST00000370087 LRRN4CLQ8ND94 238 aa14.12□□□□□ -0.15
SSR4-204ENST00000370087 OR5L2Q8NGL0 311 aa14.12□□□□□ -0.15
SSR4-204ENST00000370087 LRRC46Q96FV0 321 aa14.12□□□□□ -0.15
SSR4-204ENST00000370087 MAPKAP1Q9BPZ7 522 aa14.12□□□□□ -0.15
SSR4-204ENST00000370087 YIPF4Q9BSR8 244 aa14.12□□□□□ -0.15
SSR4-204ENST00000370087 REXO4Q9GZR2 422 aaKnown RBP14.12□□□□□ -0.15
SSR4-204ENST00000370087 PRDM7Q9NQW5 492 aa14.12□□□□□ -0.15
SSR4-204ENST00000370087 KCNE2Q9Y6J6 123 aa14.12□□□□□ -0.15
SSR4-204ENST00000370087 AHRRA9YTQ3 701 aa14.11□□□□□ -0.15
SSR4-204ENST00000370087 CLEC3AO75596 197 aa14.11□□□□□ -0.15
SSR4-204ENST00000370087 IGKV3-11P04433 115 aa14.11□□□□□ -0.15
SSR4-204ENST00000370087 PGAM1P18669 254 aa14.11□□□□□ -0.15
SSR4-204ENST00000370087 GDF1P27539 372 aa14.11□□□□□ -0.15
SSR4-204ENST00000370087 SOX18P35713 384 aa14.11□□□□□ -0.15
SSR4-204ENST00000370087 SLC6A12P48065 614 aa14.11□□□□□ -0.15
SSR4-204ENST00000370087 MTTPP55157 894 aa14.11□□□□□ -0.15
SSR4-204ENST00000370087 SORDQ00796 357 aa14.11□□□□□ -0.15
SSR4-204ENST00000370087 ZNF460Q14592 562 aa14.11□□□□□ -0.15
SSR4-204ENST00000370087 BICRALQ6AI39 1079 aa14.11□□□□□ -0.15
SSR4-204ENST00000370087 TRIM40Q6P9F5 258 aa14.11□□□□□ -0.15
SSR4-204ENST00000370087 IGDCC3Q8IVU1 814 aa14.11□□□□□ -0.15
SSR4-204ENST00000370087 OR4N5Q8IXE1 308 aa14.11□□□□□ -0.15
SSR4-204ENST00000370087 FAM13CQ8NE31 585 aa14.11□□□□□ -0.15
SSR4-204ENST00000370087 NUBPLQ8TB37 319 aa14.11□□□□□ -0.15
SSR4-204ENST00000370087 MAIP1Q8WWC4 291 aa14.11□□□□□ -0.15
SSR4-204ENST00000370087 ZNF592Q92610 1267 aa14.11□□□□□ -0.15
SSR4-204ENST00000370087 Q96MF0 132 aa14.11□□□□□ -0.15
SSR4-204ENST00000370087 F2RL3Q96RI0 385 aa14.11□□□□□ -0.15
SSR4-204ENST00000370087 PRDM14Q9GZV8 571 aa14.11□□□□□ -0.15
SSR4-204ENST00000370087 ZNF490Q9ULM2 529 aaPredicted RBP14.11□□□□□ -0.15
SSR4-204ENST00000370087 SLC6A5Q9Y345 797 aa14.11□□□□□ -0.15
SSR4-204ENST00000370087 RAI1Q7Z5J4 1906 aaPredicted RBP14.11□□□□□ -0.15
SSR4-204ENST00000370087 TRIM64A6NGJ6 449 aa14.1□□□□□ -0.15
SSR4-204ENST00000370087 TRIM64BA6NI03 449 aa14.1□□□□□ -0.15
SSR4-204ENST00000370087 FAM171A2A8MVW0 826 aa14.1□□□□□ -0.15
SSR4-204ENST00000370087 RTCAO00442 366 aaKnown RBP14.1□□□□□ -0.15
SSR4-204ENST00000370087 FGF17O60258 216 aa14.1□□□□□ -0.15
SSR4-204ENST00000370087 TRIM3O75382 744 aaPredicted RBP14.1□□□□□ -0.15
SSR4-204ENST00000370087 IL2RAP01589 272 aa14.1□□□□□ -0.15
SSR4-204ENST00000370087 FBXO45P0C2W1 286 aa14.1□□□□□ -0.15
SSR4-204ENST00000370087 CD22P20273 847 aa14.1□□□□□ -0.15
SSR4-204ENST00000370087 EFTUD2Q15029 972 aaKnown RBP eCLIP14.1□□□□□ -0.153e-6■■■■■ 41.9
SSR4-204ENST00000370087 MSS51Q4VC12 460 aa14.1□□□□□ -0.15
SSR4-204ENST00000370087 NSUN5P2Q63ZY6 315 aa14.1□□□□□ -0.15
SSR4-204ENST00000370087 KIF18BQ86Y91 864 aa14.1□□□□□ -0.15
SSR4-204ENST00000370087 RASGEF1CQ8N431 466 aa14.1□□□□□ -0.15
SSR4-204ENST00000370087 C9orf106Q8NAJ2 232 aa14.1□□□□□ -0.15
SSR4-204ENST00000370087 SPATA3Q8NHX4 192 aa14.1□□□□□ -0.15
SSR4-204ENST00000370087 SLC22A8Q8TCC7 542 aa14.1□□□□□ -0.15
SSR4-204ENST00000370087 PPWD1Q96BP3 646 aaKnown RBP14.1□□□□□ -0.15
SSR4-204ENST00000370087 PDLIM5Q96HC4 596 aaKnown RBP14.1□□□□□ -0.15
SSR4-204ENST00000370087 SENP5Q96HI0 755 aaPredicted RBP14.1□□□□□ -0.15
SSR4-204ENST00000370087 TRIB1Q96RU8 372 aa14.1□□□□□ -0.15
SSR4-204ENST00000370087 COPS7BQ9H9Q2 264 aaPredicted RBP14.1□□□□□ -0.15
SSR4-204ENST00000370087 QPCTLQ9NXS2 382 aa14.1□□□□□ -0.15
SSR4-204ENST00000370087 COPS7AQ9UBW8 275 aa14.1□□□□□ -0.15
SSR4-204ENST00000370087 CAMK2AQ9UQM7 478 aa14.1□□□□□ -0.15
SSR4-204ENST00000370087 VWA7Q9Y334 891 aa14.1□□□□□ -0.15
SSR4-204ENST00000370087 MED12Q93074 2177 aa14.1□□□□□ -0.15
SSR4-204ENST00000370087 A0A088AWK7 358 aa14.09□□□□□ -0.15
SSR4-204ENST00000370087 MBD3L4A6NDZ8 208 aaPredicted RBP14.09□□□□□ -0.15
SSR4-204ENST00000370087 MBD3L3A6NE82 208 aaPredicted RBP14.09□□□□□ -0.15
SSR4-204ENST00000370087 MBD3L5A6NJ08 208 aaPredicted RBP14.09□□□□□ -0.15
SSR4-204ENST00000370087 SIAH2O43255 324 aa14.09□□□□□ -0.15
SSR4-204ENST00000370087 C1QAP02745 245 aa14.09□□□□□ -0.15
SSR4-204ENST00000370087 ZNF37AP17032 561 aaPredicted RBP14.09□□□□□ -0.15
SSR4-204ENST00000370087 GNAZP19086 355 aa14.09□□□□□ -0.15
SSR4-204ENST00000370087 ZNF10P21506 573 aaPredicted RBP14.09□□□□□ -0.15
SSR4-204ENST00000370087 CTSSP25774 331 aa14.09□□□□□ -0.15
SSR4-204ENST00000370087 IGLV3-21P80748 117 aaPredicted RBP14.09□□□□□ -0.15
SSR4-204ENST00000370087 FOXF2Q12947 444 aa14.09□□□□□ -0.15
SSR4-204ENST00000370087 SERTAD2Q14140 314 aa14.09□□□□□ -0.15
SSR4-204ENST00000370087 FBXO48Q5FWF7 155 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms