RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 ALOXE3Q9BYJ1 711 aa13.04□□□□□ -0.32
TPM3-211ENST00000368531 TRIM55Q9BYV6 548 aa13.04□□□□□ -0.32
TPM3-211ENST00000368531 MYNNQ9NPC7 610 aa13.04□□□□□ -0.32
TPM3-211ENST00000368531 P4HTMQ9NXG6 502 aa13.04□□□□□ -0.32
TPM3-211ENST00000368531 FAM53CQ9NYF3 392 aa13.04□□□□□ -0.32
TPM3-211ENST00000368531 NOP53Q9NZM5 478 aaKnown RBP13.04□□□□□ -0.32
TPM3-211ENST00000368531 A0A1W2PS29 197 aa13.03□□□□□ -0.32
TPM3-211ENST00000368531 BLACEA4D250 179 aa13.03□□□□□ -0.32
TPM3-211ENST00000368531 ARGFXA6NJG6 315 aa13.03□□□□□ -0.32
TPM3-211ENST00000368531 K7ENP7 123 aa13.03□□□□□ -0.32
TPM3-211ENST00000368531 SEC24DO94855 1032 aaPredicted RBP13.03□□□□□ -0.32
TPM3-211ENST00000368531 TGDSO95455 350 aa13.03□□□□□ -0.32
TPM3-211ENST00000368531 GPR75O95800 540 aa13.03□□□□□ -0.32
TPM3-211ENST00000368531 TROVE2P10155 538 aaKnown RBP eCLIP13.03□□□□□ -0.32
TPM3-211ENST00000368531 PRPS2P11908 318 aa13.03□□□□□ -0.32
TPM3-211ENST00000368531 DRD2P14416 443 aa13.03□□□□□ -0.32
TPM3-211ENST00000368531 TNNI3P19429 210 aa13.03□□□□□ -0.32
TPM3-211ENST00000368531 SEC24CP53992 1094 aa13.03□□□□□ -0.32
TPM3-211ENST00000368531 DIO3P55073 304 aa13.03□□□□□ -0.32
TPM3-211ENST00000368531 UCNP55089 124 aa13.03□□□□□ -0.32
TPM3-211ENST00000368531 NME5P56597 212 aa13.03□□□□□ -0.32
TPM3-211ENST00000368531 CHAF1BQ13112 559 aa13.03□□□□□ -0.32
TPM3-211ENST00000368531 MAD2L1Q13257 205 aaPredicted RBP13.03□□□□□ -0.32
TPM3-211ENST00000368531 PTGR1Q14914 329 aa13.03□□□□□ -0.32
TPM3-211ENST00000368531 HEPACAMQ14CZ8 416 aa13.03□□□□□ -0.32
TPM3-211ENST00000368531 LSM12Q3MHD2 195 aaKnown RBP13.03□□□□□ -0.32
TPM3-211ENST00000368531 TMEM198Q66K66 360 aa13.03□□□□□ -0.32
TPM3-211ENST00000368531 FAM71E1Q6IPT2 247 aa13.03□□□□□ -0.32
TPM3-211ENST00000368531 ANKRD26P1Q6NSI1 321 aa13.03□□□□□ -0.32
TPM3-211ENST00000368531 SLC48A1Q6P1K1 146 aa13.03□□□□□ -0.32
TPM3-211ENST00000368531 INO80CQ6PI98 192 aaPredicted RBP13.03□□□□□ -0.32
TPM3-211ENST00000368531 TMEM205Q6UW68 189 aa13.03□□□□□ -0.32
TPM3-211ENST00000368531 MED25Q71SY5 747 aa13.03□□□□□ -0.32
TPM3-211ENST00000368531 OR11G2Q8NGC1 345 aa13.03□□□□□ -0.32
TPM3-211ENST00000368531 OR4K14Q8NGD5 310 aa13.03□□□□□ -0.32
TPM3-211ENST00000368531 CEP70Q8NHQ1 597 aa13.03□□□□□ -0.32
TPM3-211ENST00000368531 PPWD1Q96BP3 646 aaKnown RBP13.03□□□□□ -0.32
TPM3-211ENST00000368531 KLHL29Q96CT2 875 aa13.03□□□□□ -0.32
TPM3-211ENST00000368531 ZNF317Q96PQ6 595 aaPredicted RBP13.03□□□□□ -0.32
TPM3-211ENST00000368531 MIEF1Q9NQG6 463 aa13.03□□□□□ -0.32
TPM3-211ENST00000368531 C19orf25Q9UFG5 118 aaPredicted RBP13.03□□□□□ -0.32
TPM3-211ENST00000368531 FBXL4Q9UKA2 621 aa13.03□□□□□ -0.32
TPM3-211ENST00000368531 UTS2RQ9UKP6 389 aa13.03□□□□□ -0.32
TPM3-211ENST00000368531 EXO1Q9UQ84 846 aaKnown RBP13.03□□□□□ -0.32
TPM3-211ENST00000368531 POLHQ9Y253 713 aa13.03□□□□□ -0.32
TPM3-211ENST00000368531 MAN2B2Q9Y2E5 1009 aa13.03□□□□□ -0.32
TPM3-211ENST00000368531 CLDN16Q9Y5I7 305 aa13.03□□□□□ -0.32
TPM3-211ENST00000368531 APC2O95996 2303 aa13.03□□□□□ -0.32
TPM3-211ENST00000368531 WDFY3Q8IZQ1 3526 aa13.02□□□□□ -0.32
TPM3-211ENST00000368531 IGKV3D-11A0A0A0MRZ8 115 aa13.02□□□□□ -0.33
TPM3-211ENST00000368531 A0A0G2JND7 137 aa13.02□□□□□ -0.33
TPM3-211ENST00000368531 TCRBV16S1A1N1A0A5B0 115 aa13.02□□□□□ -0.33
TPM3-211ENST00000368531 E9PBE3 544 aa13.02□□□□□ -0.33
TPM3-211ENST00000368531 OR10H2O60403 315 aa13.02□□□□□ -0.33
TPM3-211ENST00000368531 KLHL41O60662 606 aa13.02□□□□□ -0.33
TPM3-211ENST00000368531 ALDOCP09972 364 aaKnown RBP13.02□□□□□ -0.33
TPM3-211ENST00000368531 ALOX15P16050 662 aaPredicted RBP13.02□□□□□ -0.33
TPM3-211ENST00000368531 LSP1P33241 339 aa13.02□□□□□ -0.33
TPM3-211ENST00000368531 PTGER1P34995 402 aa13.02□□□□□ -0.33
TPM3-211ENST00000368531 FEN1P39748 380 aaKnown RBP13.02□□□□□ -0.33
TPM3-211ENST00000368531 GSTM5P46439 218 aa13.02□□□□□ -0.33
TPM3-211ENST00000368531 ASMTP46597 345 aa13.02□□□□□ -0.33
TPM3-211ENST00000368531 XKP51811 444 aa13.02□□□□□ -0.33
TPM3-211ENST00000368531 RPS6KA2Q15349 733 aa13.02□□□□□ -0.33
TPM3-211ENST00000368531 PRSS53Q2L4Q9 553 aa13.02□□□□□ -0.33
TPM3-211ENST00000368531 SMU1Q2TAY7 513 aa13.02□□□□□ -0.33
TPM3-211ENST00000368531 PAPD4Q6PIY7 484 aaKnown RBP13.02□□□□□ -0.33
TPM3-211ENST00000368531 SPATA19Q7Z5L4 167 aa13.02□□□□□ -0.33
TPM3-211ENST00000368531 TICAM1Q8IUC6 712 aa13.02□□□□□ -0.33
TPM3-211ENST00000368531 PARP9Q8IXQ6 854 aa13.02□□□□□ -0.33
TPM3-211ENST00000368531 KRTCAP2Q8N6L1 136 aa13.02□□□□□ -0.33
TPM3-211ENST00000368531 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.02□□□□□ -0.33
TPM3-211ENST00000368531 ACTRT2Q8TDY3 377 aa13.02□□□□□ -0.33
TPM3-211ENST00000368531 NUDT8Q8WV74 236 aa13.02□□□□□ -0.33
TPM3-211ENST00000368531 THAP4Q8WY91 577 aa13.02□□□□□ -0.33
TPM3-211ENST00000368531 CHMP6Q96FZ7 201 aa13.02□□□□□ -0.33
TPM3-211ENST00000368531 MAELQ96JY0 434 aaKnown RBP13.02□□□□□ -0.33
TPM3-211ENST00000368531 RILPQ96NA2 401 aa13.02□□□□□ -0.33
TPM3-211ENST00000368531 DGAT2Q96PD7 388 aa13.02□□□□□ -0.33
TPM3-211ENST00000368531 FAM107BQ9H098 131 aa13.02□□□□□ -0.33
TPM3-211ENST00000368531 RABEP2Q9H5N1 569 aa13.02□□□□□ -0.33
TPM3-211ENST00000368531 ZNF160Q9HCG1 818 aa13.02□□□□□ -0.33
TPM3-211ENST00000368531 TCF7L2Q9NQB0 619 aa13.02□□□□□ -0.33
TPM3-211ENST00000368531 SH3BP4Q9P0V3 963 aa13.02□□□□□ -0.33
TPM3-211ENST00000368531 CES1P1Q9UKY3 287 aa13.02□□□□□ -0.33
TPM3-211ENST00000368531 PSME2Q9UL46 239 aa13.02□□□□□ -0.33
TPM3-211ENST00000368531 ZNF780BQ9Y6R6 833 aa13.02□□□□□ -0.33
TPM3-211ENST00000368531 ACACAQ13085 2346 aa13.02□□□□□ -0.33
TPM3-211ENST00000368531 LOC102723996A0A087X1L8 192 aa13.01□□□□□ -0.33
TPM3-211ENST00000368531 IGHV1-45A0A0A0MS14 117 aa13.01□□□□□ -0.33
TPM3-211ENST00000368531 NSG1A0A0A6YYJ2 146 aa13.01□□□□□ -0.33
TPM3-211ENST00000368531 CYC1P08574 325 aa13.01□□□□□ -0.33
TPM3-211ENST00000368531 COX6A1P12074 109 aa13.01□□□□□ -0.33
TPM3-211ENST00000368531 DDCP20711 480 aa13.01□□□□□ -0.33
TPM3-211ENST00000368531 SERTAD2Q14140 314 aa13.01□□□□□ -0.33
TPM3-211ENST00000368531 PCOLCEQ15113 449 aa13.01□□□□□ -0.33
TPM3-211ENST00000368531 CPZQ66K79 652 aa13.01□□□□□ -0.33
TPM3-211ENST00000368531 OGFOD2Q6N063 350 aa13.01□□□□□ -0.33
TPM3-211ENST00000368531 CGB2Q6NT52 195 aa13.01□□□□□ -0.33
TPM3-211ENST00000368531 PPCDCQ96CD2 204 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms