RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 SACM1LQ9NTJ5 587 aa14.81□□□□□ -0.04
CKS1B-202ENST00000368436 COPS7AQ9UBW8 275 aa14.81□□□□□ -0.04
CKS1B-202ENST00000368436 LIPGQ9Y5X9 500 aa14.81□□□□□ -0.04
CKS1B-202ENST00000368436 NCKAP5O14513 1909 aa14.81□□□□□ -0.04
CKS1B-202ENST00000368436 MED13LQ71F56 2210 aa14.81□□□□□ -0.04
CKS1B-202ENST00000368436 ARHGAP21Q5T5U3 1957 aa14.8□□□□□ -0.04
CKS1B-202ENST00000368436 FAM90A27PA6NNH2 459 aa14.8□□□□□ -0.04
CKS1B-202ENST00000368436 AQP7O14520 342 aa14.8□□□□□ -0.04
CKS1B-202ENST00000368436 FGF17O60258 216 aa14.8□□□□□ -0.04
CKS1B-202ENST00000368436 FAM155BO75949 473 aa14.8□□□□□ -0.04
CKS1B-202ENST00000368436 P04436 131 aa14.8□□□□□ -0.04
CKS1B-202ENST00000368436 CCL3P10147 92 aa14.8□□□□□ -0.04
CKS1B-202ENST00000368436 PCNAP12004 261 aa14.8□□□□□ -0.04
CKS1B-202ENST00000368436 CPN2P22792 545 aa14.8□□□□□ -0.04
CKS1B-202ENST00000368436 ACVR2AP27037 513 aa14.8□□□□□ -0.04
CKS1B-202ENST00000368436 SSR2P43308 183 aa14.8□□□□□ -0.04
CKS1B-202ENST00000368436 MAGEA5P43359 124 aa14.8□□□□□ -0.04
CKS1B-202ENST00000368436 DNASE1L1P49184 302 aa14.8□□□□□ -0.04
CKS1B-202ENST00000368436 SLAMF1Q13291 335 aa14.8□□□□□ -0.04
CKS1B-202ENST00000368436 ZNF791Q3KP31 576 aaPredicted RBP14.8□□□□□ -0.04
CKS1B-202ENST00000368436 OR4C11Q6IEV9 310 aa14.8□□□□□ -0.04
CKS1B-202ENST00000368436 GRHL2Q6ISB3 625 aa14.8□□□□□ -0.04
CKS1B-202ENST00000368436 FAM47EQ6ZV65 393 aa14.8□□□□□ -0.04
CKS1B-202ENST00000368436 MAATS1Q7Z4T9 603 aa14.8□□□□□ -0.04
CKS1B-202ENST00000368436 CTAGE3PQ8IX95 158 aa14.8□□□□□ -0.04
CKS1B-202ENST00000368436 OR4N5Q8IXE1 308 aa14.8□□□□□ -0.04
CKS1B-202ENST00000368436 OR5M3Q8NGP4 307 aa14.8□□□□□ -0.04
CKS1B-202ENST00000368436 SENP5Q96HI0 755 aaPredicted RBP14.8□□□□□ -0.04
CKS1B-202ENST00000368436 SMC6Q96SB8 1091 aa14.8□□□□□ -0.04
CKS1B-202ENST00000368436 TTYH2Q9BSA4 534 aa14.8□□□□□ -0.04
CKS1B-202ENST00000368436 OR51B5Q9H339 312 aa14.8□□□□□ -0.04
CKS1B-202ENST00000368436 IGSF5Q9NSI5 407 aa14.8□□□□□ -0.04
CKS1B-202ENST00000368436 MS4A12Q9NXJ0 267 aa14.8□□□□□ -0.04
CKS1B-202ENST00000368436 TUBA8Q9NY65 449 aaPredicted RBP14.8□□□□□ -0.04
CKS1B-202ENST00000368436 OPTCQ9UBM4 332 aa14.8□□□□□ -0.04
CKS1B-202ENST00000368436 TNFRSF10DQ9UBN6 386 aa14.8□□□□□ -0.04
CKS1B-202ENST00000368436 ADGRE2Q9UHX3 823 aa14.8□□□□□ -0.04
CKS1B-202ENST00000368436 TSC22D4Q9Y3Q8 395 aa14.8□□□□□ -0.04
CKS1B-202ENST00000368436 ATG4BQ9Y4P1 393 aa14.8□□□□□ -0.04
CKS1B-202ENST00000368436 CELSR1Q9NYQ6 3014 aa14.8□□□□□ -0.04
CKS1B-202ENST00000368436 UBXN8O00124 270 aa14.79□□□□□ -0.04
CKS1B-202ENST00000368436 SAP18O00422 153 aaKnown RBP14.79□□□□□ -0.04
CKS1B-202ENST00000368436 RAD51CO43502 376 aa14.79□□□□□ -0.04
CKS1B-202ENST00000368436 SUSD5O60279 629 aa14.79□□□□□ -0.04
CKS1B-202ENST00000368436 KERAO60938 352 aa14.79□□□□□ -0.04
CKS1B-202ENST00000368436 SH3BGRLO75368 114 aa14.79□□□□□ -0.04
CKS1B-202ENST00000368436 NADKO95544 446 aaPredicted RBP14.79□□□□□ -0.04
CKS1B-202ENST00000368436 HOXD4P09016 255 aaPredicted RBP14.79□□□□□ -0.04
CKS1B-202ENST00000368436 MTHFD2P13995 350 aa14.79□□□□□ -0.04
CKS1B-202ENST00000368436 COX7A2P14406 83 aa14.79□□□□□ -0.04
CKS1B-202ENST00000368436 CRABP2P29373 138 aa14.79□□□□□ -0.04
CKS1B-202ENST00000368436 ARFIP1P53367 373 aa14.79□□□□□ -0.04
CKS1B-202ENST00000368436 ASPHQ12797 758 aa14.79□□□□□ -0.04
CKS1B-202ENST00000368436 KBTBD12Q3ZCT8 623 aa14.79□□□□□ -0.04
CKS1B-202ENST00000368436 RTL6Q6ICC9 239 aa14.79□□□□□ -0.04
CKS1B-202ENST00000368436 ZNF585AQ6P3V2 769 aa14.79□□□□□ -0.04
CKS1B-202ENST00000368436 ADGRD1Q6QNK2 874 aa14.79□□□□□ -0.04
CKS1B-202ENST00000368436 LYPD8Q6UX82 237 aa14.79□□□□□ -0.04
CKS1B-202ENST00000368436 DGAT2L6Q6ZPD8 337 aa14.79□□□□□ -0.04
CKS1B-202ENST00000368436 RAPH1Q70E73 1250 aa14.79□□□□□ -0.04
CKS1B-202ENST00000368436 CMC1Q7Z7K0 106 aa14.79□□□□□ -0.04
CKS1B-202ENST00000368436 C9orf40Q8IXQ3 194 aa14.79□□□□□ -0.04
CKS1B-202ENST00000368436 ZCCHC7Q8N3Z6 543 aaKnown RBP14.79□□□□□ -0.04
CKS1B-202ENST00000368436 SLC15A4Q8N697 577 aa14.79□□□□□ -0.04
CKS1B-202ENST00000368436 PPM1NQ8N819 430 aa14.79□□□□□ -0.04
CKS1B-202ENST00000368436 SPATA4Q8NEY3 305 aa14.79□□□□□ -0.04
CKS1B-202ENST00000368436 OR5M9Q8NGP3 310 aa14.79□□□□□ -0.04
CKS1B-202ENST00000368436 TANKQ92844 425 aa14.79□□□□□ -0.04
CKS1B-202ENST00000368436 RGMAQ96B86 450 aa14.79□□□□□ -0.04
CKS1B-202ENST00000368436 DGAT2Q96PD7 388 aa14.79□□□□□ -0.04
CKS1B-202ENST00000368436 SORBS1Q9BX66 1292 aaKnown RBP14.79□□□□□ -0.04
CKS1B-202ENST00000368436 RPF2Q9H7B2 306 aaKnown RBP14.79□□□□□ -0.04
CKS1B-202ENST00000368436 SEMA4BQ9NPR2 832 aaPredicted RBP14.79□□□□□ -0.04
CKS1B-202ENST00000368436 KCNN3Q9UGI6 736 aa14.79□□□□□ -0.04
CKS1B-202ENST00000368436 FAM215AQ9Y5M1 114 aa14.79□□□□□ -0.04
CKS1B-202ENST00000368436 FIGNL2A6NMB9 653 aa14.78□□□□□ -0.04
CKS1B-202ENST00000368436 SUPT3HB4E1H0 165 aa14.78□□□□□ -0.04
CKS1B-202ENST00000368436 PLPP1O14494 284 aa14.78□□□□□ -0.04
CKS1B-202ENST00000368436 KLK8O60259 260 aa14.78□□□□□ -0.04
CKS1B-202ENST00000368436 ABCB7O75027 752 aa14.78□□□□□ -0.04
CKS1B-202ENST00000368436 SUPT3HO75486 399 aa14.78□□□□□ -0.04
CKS1B-202ENST00000368436 CELA3AP09093 270 aa14.78□□□□□ -0.04
CKS1B-202ENST00000368436 LTA4HP09960 611 aaKnown RBP14.78□□□□□ -0.04
CKS1B-202ENST00000368436 GLI4P10075 376 aa14.78□□□□□ -0.04
CKS1B-202ENST00000368436 EPB42P16452 691 aa14.78□□□□□ -0.04
CKS1B-202ENST00000368436 PIK3CBP42338 1070 aa14.78□□□□□ -0.04
CKS1B-202ENST00000368436 TNFRSF17Q02223 184 aa14.78□□□□□ -0.04
CKS1B-202ENST00000368436 FOLH1Q04609 750 aa14.78□□□□□ -0.04
CKS1B-202ENST00000368436 SLC10A1Q14973 349 aa14.78□□□□□ -0.04
CKS1B-202ENST00000368436 SLC22A10Q63ZE4 541 aa14.78□□□□□ -0.04
CKS1B-202ENST00000368436 B3GNT6Q6ZMB0 384 aa14.78□□□□□ -0.04
CKS1B-202ENST00000368436 TBC1D1Q86TI0 1168 aaPredicted RBP14.78□□□□□ -0.04
CKS1B-202ENST00000368436 GPR180Q86V85 440 aa14.78□□□□□ -0.04
CKS1B-202ENST00000368436 RNF175Q8N4F7 328 aa14.78□□□□□ -0.04
CKS1B-202ENST00000368436 HUS1BQ8NHY5 278 aa14.78□□□□□ -0.04
CKS1B-202ENST00000368436 SLC22A8Q8TCC7 542 aa14.78□□□□□ -0.04
CKS1B-202ENST00000368436 PPWD1Q96BP3 646 aaKnown RBP14.78□□□□□ -0.04
CKS1B-202ENST00000368436 RBM18Q96H35 190 aaKnown RBP14.78□□□□□ -0.04
CKS1B-202ENST00000368436 FBXL20Q96IG2 436 aa14.78□□□□□ -0.04
CKS1B-202ENST00000368436 ART5Q96L15 291 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms