RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 LIPEQ05469 1076 aa11.43□□□□□ -0.58
USF1-203ENST00000368021 CCNIQ14094 377 aa11.43□□□□□ -0.58
USF1-203ENST00000368021 ZNF385BQ569K4 471 aa11.43□□□□□ -0.58
USF1-203ENST00000368021 FRMPD2BQ6IN97 320 aa11.43□□□□□ -0.58
USF1-203ENST00000368021 DBX2Q6ZNG2 339 aa11.43□□□□□ -0.58
USF1-203ENST00000368021 ABHD13Q7L211 337 aa11.43□□□□□ -0.58
USF1-203ENST00000368021 TMEM126BQ8IUX1 230 aa11.43□□□□□ -0.58
USF1-203ENST00000368021 OR4N4Q8N0Y3 316 aa11.43□□□□□ -0.58
USF1-203ENST00000368021 FAM47BQ8NA70 645 aa11.43□□□□□ -0.58
USF1-203ENST00000368021 CATSPER1Q8NEC5 780 aa11.43□□□□□ -0.58
USF1-203ENST00000368021 OR4C6Q8NH72 309 aa11.43□□□□□ -0.58
USF1-203ENST00000368021 UTP15Q8TED0 518 aaKnown RBP11.43□□□□□ -0.58
USF1-203ENST00000368021 MAP3K3Q99759 626 aa11.43□□□□□ -0.58
USF1-203ENST00000368021 INPP5KQ9BT40 448 aa11.43□□□□□ -0.58
USF1-203ENST00000368021 FAIM2Q9BWQ8 316 aa11.43□□□□□ -0.58
USF1-203ENST00000368021 KLHL25Q9H0H3 589 aa11.43□□□□□ -0.58
USF1-203ENST00000368021 LYARQ9NX58 379 aaKnown RBP11.43□□□□□ -0.58
USF1-203ENST00000368021 ZNF701M0R085 212 aaPredicted RBP11.42□□□□□ -0.58
USF1-203ENST00000368021 TXNDC9O14530 226 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 SRPX2O60687 465 aaPredicted RBP11.42□□□□□ -0.58
USF1-203ENST00000368021 PRAMEF10O60809 474 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 B3GALT4O96024 378 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 STATHP02808 62 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 MYF5P13349 255 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 UQCRBP14927 111 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 HTR1EP28566 365 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 ALDH4A1P30038 563 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 MSX2P35548 267 aaPredicted RBP11.42□□□□□ -0.58
USF1-203ENST00000368021 CDKN2CP42773 168 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 GSK3BP49841 420 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 CHN2P52757 468 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 MTPNP58546 118 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 SIM1P81133 766 aaPredicted RBP11.42□□□□□ -0.58
USF1-203ENST00000368021 SLAMF1Q13291 335 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 TRIP6Q15654 476 aaKnown RBP11.42□□□□□ -0.58
USF1-203ENST00000368021 PIP4P1Q86T03 277 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 TICAM1Q8IUC6 712 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 AMER3Q8N944 861 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 FAM181AQ8N9Y4 354 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 MINDY2Q8NBR6 621 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 OR8K5Q8NH50 307 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 AHCYL2Q96HN2 611 aaKnown RBP11.42□□□□□ -0.58
USF1-203ENST00000368021 KCTD14Q9BQ13 255 aaPredicted RBP11.42□□□□□ -0.58
USF1-203ENST00000368021 NLNQ9BYT8 704 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 TRIM8Q9BZR9 551 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 KAT8Q9H7Z6 458 aaKnown RBP11.42□□□□□ -0.58
USF1-203ENST00000368021 COPS7BQ9H9Q2 264 aaPredicted RBP11.42□□□□□ -0.58
USF1-203ENST00000368021 SLC6A13Q9NSD5 602 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 TEX10Q9NXF1 929 aaPredicted RBP11.42□□□□□ -0.58
USF1-203ENST00000368021 ACTR3BQ9P1U1 418 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 ASB4Q9Y574 426 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 PCDHGB2Q9Y5G2 931 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 UNC13CQ8NB66 2214 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 A0A0G2JN53 185 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 SLC9B1P1A6NJY1 282 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 DUX1O43812 170 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 STAMBPO95630 424 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 ZNF888P0CJ79 500 aaPredicted RBP11.42□□□□□ -0.58
USF1-203ENST00000368021 CEACAM1P13688 526 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 CERS1P27544 350 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 FRKP42685 505 aaPredicted RBP11.42□□□□□ -0.58
USF1-203ENST00000368021 RAB8AP61006 207 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 SELPLGQ14242 412 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 MPEG1Q2M385 716 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 NDUFAF5Q5TEU4 345 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 FAAH2Q6GMR7 532 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 TMEM214Q6NUQ4 689 aaKnown RBP11.42□□□□□ -0.58
USF1-203ENST00000368021 NIPAL1Q6NVV3 410 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 DHFR2Q86XF0 187 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 PLXDC1Q8IUK5 500 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 CLECL1Q8IZS7 167 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 CACTIN-AS1Q8N1I8 211 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 DNAJC22Q8N4W6 341 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 CSNK1A1LQ8N752 337 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 BHLHE22Q8NFJ8 381 aaPredicted RBP11.42□□□□□ -0.58
USF1-203ENST00000368021 SERINC2Q96SA4 455 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 CCDC3Q9BQI4 270 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 CPPED1Q9BRF8 314 aaPredicted RBP11.42□□□□□ -0.58
USF1-203ENST00000368021 THUMPD3Q9BV44 507 aaKnown RBP11.42□□□□□ -0.58
USF1-203ENST00000368021 PCDHAC1Q9H158 963 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 IKZF5Q9H5V7 419 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 FAM60AQ9NP50 221 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 PRDM9Q9NQV7 894 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 ZNF282Q9UDV7 671 aaPredicted RBP11.42□□□□□ -0.58
USF1-203ENST00000368021 PCDHGB4Q9UN71 923 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 ERVK-11Q9UQG0 969 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 SLC22A7Q9Y694 548 aa11.42□□□□□ -0.58
USF1-203ENST00000368021 RP1P56715 2156 aa11.41□□□□□ -0.58
USF1-203ENST00000368021 NCOR2Q9Y618 2525 aa11.41□□□□□ -0.58
USF1-203ENST00000368021 C1orf226A1L170 272 aa11.41□□□□□ -0.58
USF1-203ENST00000368021 H0Y3Z8 333 aa11.41□□□□□ -0.58
USF1-203ENST00000368021 SIGLEC6O43699 453 aa11.41□□□□□ -0.58
USF1-203ENST00000368021 KRT36O76013 467 aa11.41□□□□□ -0.58
USF1-203ENST00000368021 C9P02748 559 aa11.41□□□□□ -0.58
USF1-203ENST00000368021 ALOX12P18054 663 aa11.41□□□□□ -0.58
USF1-203ENST00000368021 CSRP1P21291 193 aaKnown RBP11.41□□□□□ -0.58
USF1-203ENST00000368021 PPIBP23284 216 aaKnown RBP11.41□□□□□ -0.58
USF1-203ENST00000368021 EMP3P54852 163 aa11.41□□□□□ -0.58
USF1-203ENST00000368021 GFERP55789 205 aa11.41□□□□□ -0.58
USF1-203ENST00000368021 OR1D5P58170 312 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms