RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 SLC30A8Q8IWU4 369 aa11□□□□□ -0.65
USF1-201ENST00000368019 UBQLNLQ8IYU4 475 aa11□□□□□ -0.65
USF1-201ENST00000368019 NXPE1Q8N323 547 aa11□□□□□ -0.65
USF1-201ENST00000368019 OR4C15Q8NGM1 316 aa11□□□□□ -0.65
USF1-201ENST00000368019 LILRB4Q8NHJ6 448 aa11□□□□□ -0.65
USF1-201ENST00000368019 BAHD1Q8TBE0 780 aaPredicted RBP11□□□□□ -0.65
USF1-201ENST00000368019 LKAAEAR1Q8TD35 194 aa11□□□□□ -0.65
USF1-201ENST00000368019 GGHQ92820 318 aa11□□□□□ -0.65
USF1-201ENST00000368019 PANX1Q96RD7 426 aa11□□□□□ -0.65
USF1-201ENST00000368019 MAPKAP1Q9BPZ7 522 aa11□□□□□ -0.65
USF1-201ENST00000368019 REXO4Q9GZR2 422 aaKnown RBP11□□□□□ -0.65
USF1-201ENST00000368019 NUAK2Q9H093 628 aa11□□□□□ -0.65
USF1-201ENST00000368019 PCED1AQ9H1Q7 454 aa11□□□□□ -0.65
USF1-201ENST00000368019 TMEM245Q9H330 911 aa11□□□□□ -0.65
USF1-201ENST00000368019 ASB8Q9H765 288 aa11□□□□□ -0.65
USF1-201ENST00000368019 IL21RQ9HBE5 538 aa11□□□□□ -0.65
USF1-201ENST00000368019 ZBTB20Q9HC78 741 aaPredicted RBP11□□□□□ -0.65
USF1-201ENST00000368019 BPIFA1Q9NP55 256 aa11□□□□□ -0.65
USF1-201ENST00000368019 SIRT5Q9NXA8 310 aa11□□□□□ -0.65
USF1-201ENST00000368019 GPRC5BQ9NZH0 403 aa11□□□□□ -0.65
USF1-201ENST00000368019 ZNF282Q9UDV7 671 aaPredicted RBP11□□□□□ -0.65
USF1-201ENST00000368019 ZNF221Q9UK13 617 aa11□□□□□ -0.65
USF1-201ENST00000368019 PCDHB9Q9Y5E1 797 aa11□□□□□ -0.65
USF1-201ENST00000368019 CELSR3Q9NYQ7 3312 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 IGLV3-16A0A075B6K0 115 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 GLYATL1P3A0A0U1RQE8 302 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 hCG_2039718K7EN88 272 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 KPNA5O15131 536 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 KMOO15229 486 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 SCO2O43819 266 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 IDH3BO43837 385 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 MAN1A2O60476 641 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 TRBC1P01850 177 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 EPHX1P07099 455 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 HLA-FP30511 346 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 SLC19A1P41440 591 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 RPIAP49247 311 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 RGS6P49758 472 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 NEK2P51955 445 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 IL1RL1Q01638 556 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 RHAGQ02094 409 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 COL9A2Q14055 689 aaPredicted RBP10.99□□□□□ -0.65
USF1-201ENST00000368019 SMN1Q16637 294 aaKnown RBP10.99□□□□□ -0.65
USF1-201ENST00000368019 CDKN3Q16667 212 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 UGT8Q16880 541 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 HLA-BQ31612 363 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 MPPE1Q53F39 396 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 ADGRF1Q5T601 910 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 MEDAGQ5VYS4 303 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 RNF219Q5W0B1 726 aaPredicted RBP10.99□□□□□ -0.65
USF1-201ENST00000368019 FRG2Q64ET8 278 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 LRRC66Q68CR7 880 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 OR4F3Q6IEY1 312 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 GDPD3Q7L5L3 318 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 ZNF605Q86T29 641 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 ADIPOR2Q86V24 386 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 FAM124AQ86V42 546 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 TRIM69Q86WT6 500 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 HEATR4Q86WZ0 1026 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 SNX29P2Q8IUI4 249 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 CFAP52Q8N1V2 620 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 FAM181AQ8N9Y4 354 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 DCAF4L2Q8NA75 395 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 C11orf65Q8NCR3 313 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 VPS37AQ8NEZ2 397 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 OR10G2Q8NGC3 310 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 OR6F1Q8NGZ6 308 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 GOT1L1Q8NHS2 421 aaPredicted RBP10.99□□□□□ -0.65
USF1-201ENST00000368019 NUDT8Q8WV74 236 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 HTRA1Q92743 480 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 EXOC2Q96KP1 924 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 TSSK3Q96PN8 268 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 FRG2BQ96QU4 278 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 TRAF4Q9BUZ4 470 aaPredicted RBP10.99□□□□□ -0.65
USF1-201ENST00000368019 C6orf62Q9GZU0 229 aaPredicted RBP10.99□□□□□ -0.65
USF1-201ENST00000368019 MIR1-1HGQ9H1L0 117 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 GAREM1Q9H706 876 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 BRF2Q9HAW0 419 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 ZFYVE1Q9HBF4 777 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 PCDH12Q9NPG4 1184 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 DYRK4Q9NR20 520 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 DNAJC11Q9NVH1 559 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 TOR4AQ9NXH8 423 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 ZDHHC3Q9NYG2 299 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 CRLS1Q9UJA2 301 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 LHX6Q9UPM6 363 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 FNDC3AQ9Y2H6 1198 aaKnown RBP10.99□□□□□ -0.65
USF1-201ENST00000368019 ACTL7AQ9Y615 435 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 SLCO1B1Q9Y6L6 691 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 PLXNA2O75051 1894 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 ASXL3Q9C0F0 2248 aa10.99□□□□□ -0.65
USF1-201ENST00000368019 C1orf226A1L170 272 aa10.98□□□□□ -0.65
USF1-201ENST00000368019 PDZK1P1A8MUH7 402 aa10.98□□□□□ -0.65
USF1-201ENST00000368019 CBX4O00257 560 aa10.98□□□□□ -0.65
USF1-201ENST00000368019 TNFRSF11BO00300 401 aa10.98□□□□□ -0.65
USF1-201ENST00000368019 SLITRK5O94991 958 aa10.98□□□□□ -0.65
USF1-201ENST00000368019 CER1O95813 267 aa10.98□□□□□ -0.65
USF1-201ENST00000368019 HIST1H2AGP0C0S8 130 aaPredicted RBP10.98□□□□□ -0.65
USF1-201ENST00000368019 DBTP11182 482 aaKnown RBP10.98□□□□□ -0.65
USF1-201ENST00000368019 HLA-EP13747 358 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms