RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 GPR180Q86V85 440 aa13.74□□□□□ -0.21
CTSD-202ENST00000367196 ZCCHC7Q8N3Z6 543 aaKnown RBP13.74□□□□□ -0.21
CTSD-202ENST00000367196 TEX9Q8N6V9 391 aa13.74□□□□□ -0.21
CTSD-202ENST00000367196 HUS1BQ8NHY5 278 aa13.74□□□□□ -0.21
CTSD-202ENST00000367196 SCYL1Q96KG9 808 aa13.74□□□□□ -0.21
CTSD-202ENST00000367196 ENKD1Q9H0I2 346 aa13.74□□□□□ -0.21
CTSD-202ENST00000367196 LIN28AQ9H9Z2 209 aaKnown RBP13.74□□□□□ -0.21
CTSD-202ENST00000367196 IL1RL2Q9HB29 575 aa13.74□□□□□ -0.21
CTSD-202ENST00000367196 SLC24A3Q9HC58 644 aa13.74□□□□□ -0.21
CTSD-202ENST00000367196 DMRT3Q9NQL9 472 aa13.74□□□□□ -0.21
CTSD-202ENST00000367196 DEPPQ9NTK1 212 aa13.74□□□□□ -0.21
CTSD-202ENST00000367196 LYARQ9NX58 379 aaKnown RBP13.74□□□□□ -0.21
CTSD-202ENST00000367196 DNAJC13O75165 2243 aa13.74□□□□□ -0.21
CTSD-202ENST00000367196 ZNF407Q9C0G0 2248 aa13.74□□□□□ -0.21
CTSD-202ENST00000367196 FAM166BA8MTA8 275 aa13.73□□□□□ -0.21
CTSD-202ENST00000367196 C19orf84I3L1E1 186 aa13.73□□□□□ -0.21
CTSD-202ENST00000367196 FGF17O60258 216 aa13.73□□□□□ -0.21
CTSD-202ENST00000367196 FAM155BO75949 473 aa13.73□□□□□ -0.21
CTSD-202ENST00000367196 PDE9AO76083 593 aa13.73□□□□□ -0.21
CTSD-202ENST00000367196 GLSO94925 669 aaPredicted RBP13.73□□□□□ -0.21
CTSD-202ENST00000367196 PTX3P26022 381 aaPredicted RBP13.73□□□□□ -0.21
CTSD-202ENST00000367196 KIR3DL1P43629 444 aa13.73□□□□□ -0.21
CTSD-202ENST00000367196 ALDH18A1P54886 795 aaKnown RBP13.73□□□□□ -0.21
CTSD-202ENST00000367196 ETF1P62495 437 aaKnown RBP13.73□□□□□ -0.21
CTSD-202ENST00000367196 DLG1Q12959 904 aa13.73□□□□□ -0.21
CTSD-202ENST00000367196 SETDB1Q15047 1291 aa13.73□□□□□ -0.21
CTSD-202ENST00000367196 CDSNQ15517 529 aa13.73□□□□□ -0.21
CTSD-202ENST00000367196 MEX3BQ6ZN04 569 aaKnown RBP13.73□□□□□ -0.21
CTSD-202ENST00000367196 C16orf47Q6ZP98 133 aaPredicted RBP13.73□□□□□ -0.21
CTSD-202ENST00000367196 SLC29A4Q7RTT9 530 aa13.73□□□□□ -0.21
CTSD-202ENST00000367196 ST13P4Q8IZP2 240 aaPredicted RBP13.73□□□□□ -0.21
CTSD-202ENST00000367196 SLC15A4Q8N697 577 aa13.73□□□□□ -0.21
CTSD-202ENST00000367196 OR5M3Q8NGP4 307 aa13.73□□□□□ -0.21
CTSD-202ENST00000367196 ZNF721Q8TF20 911 aa13.73□□□□□ -0.21
CTSD-202ENST00000367196 ANKRD9Q96BM1 317 aaPredicted RBP13.73□□□□□ -0.21
CTSD-202ENST00000367196 NXNL1Q96CM4 212 aa13.73□□□□□ -0.21
CTSD-202ENST00000367196 FBXL20Q96IG2 436 aa13.73□□□□□ -0.21
CTSD-202ENST00000367196 SMC6Q96SB8 1091 aa13.73□□□□□ -0.21
CTSD-202ENST00000367196 DEFB127Q9H1M4 99 aa13.73□□□□□ -0.21
CTSD-202ENST00000367196 OR51B5Q9H339 312 aa13.73□□□□□ -0.21
CTSD-202ENST00000367196 WDR41Q9HAD4 459 aa13.73□□□□□ -0.21
CTSD-202ENST00000367196 PHF3Q92576 2039 aaKnown RBP13.73□□□□□ -0.21
CTSD-202ENST00000367196 CSMD2Q7Z408 3487 aa13.72□□□□□ -0.21
CTSD-202ENST00000367196 MYOCOSA0A1B0GUC4 107 aa13.72□□□□□ -0.21
CTSD-202ENST00000367196 FAM47E-STBD1D6RA91 191 aa13.72□□□□□ -0.21
CTSD-202ENST00000367196 NPIPA2E9PIF3 369 aa13.72□□□□□ -0.21
CTSD-202ENST00000367196 NPIPA3F8WFD2 350 aa13.72□□□□□ -0.21
CTSD-202ENST00000367196 H0YIV9 168 aa13.72□□□□□ -0.21
CTSD-202ENST00000367196 SAP18O00422 153 aaKnown RBP13.72□□□□□ -0.21
CTSD-202ENST00000367196 PLPP1O14494 284 aa13.72□□□□□ -0.21
CTSD-202ENST00000367196 OR10H2O60403 315 aa13.72□□□□□ -0.21
CTSD-202ENST00000367196 SH3BGRLO75368 114 aa13.72□□□□□ -0.21
CTSD-202ENST00000367196 ETHE1O95571 254 aa13.72□□□□□ -0.21
CTSD-202ENST00000367196 IGHG3P01860 377 aa13.72□□□□□ -0.21
CTSD-202ENST00000367196 ALOX15P16050 662 aaPredicted RBP13.72□□□□□ -0.21
CTSD-202ENST00000367196 SERPINB8P50452 374 aa13.72□□□□□ -0.21
CTSD-202ENST00000367196 ID2Q02363 134 aa13.72□□□□□ -0.21
CTSD-202ENST00000367196 FOLH1Q04609 750 aa13.72□□□□□ -0.21
CTSD-202ENST00000367196 PFKFB4Q16877 469 aa13.72□□□□□ -0.21
CTSD-202ENST00000367196 HYAL4Q2M3T9 481 aa13.72□□□□□ -0.21
CTSD-202ENST00000367196 ZNF750Q32MQ0 723 aa13.72□□□□□ -0.21
CTSD-202ENST00000367196 C10orf62Q5T681 223 aaPredicted RBP13.72□□□□□ -0.21
CTSD-202ENST00000367196 MROH9Q5TGP6 573 aa13.72□□□□□ -0.21
CTSD-202ENST00000367196 SLC22A10Q63ZE4 541 aa13.72□□□□□ -0.21
CTSD-202ENST00000367196 C8orf74Q6P047 294 aa13.72□□□□□ -0.21
CTSD-202ENST00000367196 CYP20A1Q6UW02 462 aa13.72□□□□□ -0.21
CTSD-202ENST00000367196 NUDT13Q86X67 352 aa13.72□□□□□ -0.21
CTSD-202ENST00000367196 ZNF321PQ8N8H1 164 aa13.72□□□□□ -0.21
CTSD-202ENST00000367196 KCTD4Q8WVF5 259 aa13.72□□□□□ -0.21
CTSD-202ENST00000367196 SENP5Q96HI0 755 aaPredicted RBP13.72□□□□□ -0.21
CTSD-202ENST00000367196 MTERF1Q99551 399 aaKnown RBP13.72□□□□□ -0.21
CTSD-202ENST00000367196 KCNJ16Q9NPI9 418 aa13.72□□□□□ -0.21
CTSD-202ENST00000367196 SNX15Q9NRS6 342 aa13.72□□□□□ -0.21
CTSD-202ENST00000367196 PSD3Q9NYI0 1048 aa13.72□□□□□ -0.21
CTSD-202ENST00000367196 BOKQ9UMX3 212 aaPredicted RBP13.72□□□□□ -0.21
CTSD-202ENST00000367196 RNF6Q9Y252 685 aa13.72□□□□□ -0.21
CTSD-202ENST00000367196 A0A096LPK6 155 aa13.71□□□□□ -0.21
CTSD-202ENST00000367196 IQANK1A0A1B0GTG1 560 aa13.71□□□□□ -0.21
CTSD-202ENST00000367196 PINLYPA6NC86 204 aa13.71□□□□□ -0.21
CTSD-202ENST00000367196 OR6C76A6NM76 312 aa13.71□□□□□ -0.21
CTSD-202ENST00000367196 SUSD5O60279 629 aa13.71□□□□□ -0.21
CTSD-202ENST00000367196 KLHL2O95198 593 aa13.71□□□□□ -0.21
CTSD-202ENST00000367196 IGKV3-11P04433 115 aa13.71□□□□□ -0.21
CTSD-202ENST00000367196 C2P06681 752 aa13.71□□□□□ -0.21
CTSD-202ENST00000367196 NR2F6P10588 404 aa13.71□□□□□ -0.21
CTSD-202ENST00000367196 MTHFD2P13995 350 aa13.71□□□□□ -0.21
CTSD-202ENST00000367196 ACVR2AP27037 513 aa13.71□□□□□ -0.21
CTSD-202ENST00000367196 SERPINB3P29508 390 aa13.71□□□□□ -0.21
CTSD-202ENST00000367196 GALNSP34059 522 aa13.71□□□□□ -0.21
CTSD-202ENST00000367196 ARL1P40616 181 aaPredicted RBP13.71□□□□□ -0.21
CTSD-202ENST00000367196 KCNJ2P63252 427 aa13.71□□□□□ -0.21
CTSD-202ENST00000367196 TLE4Q04727 773 aa13.71□□□□□ -0.21
CTSD-202ENST00000367196 ASPHQ12797 758 aa13.71□□□□□ -0.21
CTSD-202ENST00000367196 CUL3Q13618 768 aa13.71□□□□□ -0.21
CTSD-202ENST00000367196 GTF2H2Q13888 395 aa13.71□□□□□ -0.21
CTSD-202ENST00000367196 PCBP2Q15366 365 aaKnown RBP eCLIP13.71□□□□□ -0.21
CTSD-202ENST00000367196 UAP1Q16222 522 aaPredicted RBP13.71□□□□□ -0.21
CTSD-202ENST00000367196 SPRED3Q2MJR0 410 aa13.71□□□□□ -0.21
CTSD-202ENST00000367196 PIGGQ5H8A4 983 aa13.71□□□□□ -0.21
CTSD-202ENST00000367196 GTF2H2CQ6P1K8 395 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms