RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 OPN1SWP03999 348 aa11.54□□□□□ -0.56
CDC42BPA-203ENST00000366766 RPS17P08708 135 aaKnown RBP11.54□□□□□ -0.56
CDC42BPA-203ENST00000366766 GNAO1P09471 354 aa11.54□□□□□ -0.56
CDC42BPA-203ENST00000366766 HOXC13P31276 330 aa11.54□□□□□ -0.56
CDC42BPA-203ENST00000366766 SH3BP2P78314 561 aa11.54□□□□□ -0.56
CDC42BPA-203ENST00000366766 AAK1Q2M2I8 961 aa11.54□□□□□ -0.56
CDC42BPA-203ENST00000366766 FLYWCH1Q4VC44 716 aa11.54□□□□□ -0.56
CDC42BPA-203ENST00000366766 TOR1AIP1Q5JTV8 583 aa11.54□□□□□ -0.56
CDC42BPA-203ENST00000366766 CYB5D2Q8WUJ1 264 aa11.54□□□□□ -0.56
CDC42BPA-203ENST00000366766 MGLLQ99685 303 aa11.54□□□□□ -0.56
CDC42BPA-203ENST00000366766 AIFM2Q9BRQ8 373 aa11.54□□□□□ -0.56
CDC42BPA-203ENST00000366766 TMED9Q9BVK6 235 aa11.54□□□□□ -0.56
CDC42BPA-203ENST00000366766 CD93Q9NPY3 652 aa11.54□□□□□ -0.56
CDC42BPA-203ENST00000366766 ABCA3Q99758 1704 aa11.54□□□□□ -0.56
CDC42BPA-203ENST00000366766 RP2O75695 350 aa11.54□□□□□ -0.56
CDC42BPA-203ENST00000366766 PRH1P02810 166 aa11.54□□□□□ -0.56
CDC42BPA-203ENST00000366766 RNH1P13489 461 aaKnown RBP11.54□□□□□ -0.56
CDC42BPA-203ENST00000366766 CCINQ13939 588 aa11.54□□□□□ -0.56
CDC42BPA-203ENST00000366766 GLT8D1Q68CQ7 371 aa11.54□□□□□ -0.56
CDC42BPA-203ENST00000366766 NXPE4Q6UWF7 544 aa11.54□□□□□ -0.56
CDC42BPA-203ENST00000366766 ACBD7Q8N6N7 88 aa11.54□□□□□ -0.56
CDC42BPA-203ENST00000366766 MFSD2AQ8NA29 543 aa11.54□□□□□ -0.56
CDC42BPA-203ENST00000366766 ITFG2Q969R8 447 aa11.54□□□□□ -0.56
CDC42BPA-203ENST00000366766 MCHR1Q99705 422 aa11.54□□□□□ -0.56
CDC42BPA-203ENST00000366766 NTMT1Q9BV86 223 aa11.54□□□□□ -0.56
CDC42BPA-203ENST00000366766 OR51B5Q9H339 312 aa11.54□□□□□ -0.56
CDC42BPA-203ENST00000366766 APOL3O95236 402 aa11.54□□□□□ -0.56
CDC42BPA-203ENST00000366766 ACTBP60709 375 aa11.54□□□□□ -0.56
CDC42BPA-203ENST00000366766 TRA2BP62995 288 aaKnown RBP11.54□□□□□ -0.56
CDC42BPA-203ENST00000366766 ACTG1P63261 375 aa11.54□□□□□ -0.56
CDC42BPA-203ENST00000366766 CDKL1Q00532 357 aa11.54□□□□□ -0.56
CDC42BPA-203ENST00000366766 OR13J1Q8NGT2 312 aa11.54□□□□□ -0.56
CDC42BPA-203ENST00000366766 RPLP0P6Q8NHW5 317 aa11.54□□□□□ -0.56
CDC42BPA-203ENST00000366766 SFXN1Q9H9B4 322 aa11.54□□□□□ -0.56
CDC42BPA-203ENST00000366766 SLC36A3Q495N2 470 aa11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 ASPGQ86U10 573 aa11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 SLC37A3Q8NCC5 494 aa11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 B3GNT4Q9C0J1 378 aa11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 PMF1-BGLAPU3KQ54 211 aa11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 NUDT1P36639 197 aa11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 ARRB1P49407 418 aaPredicted RBP11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 DPY19L3Q6ZPD9 716 aa11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 AKAP1Q92667 903 aaKnown RBP eCLIP11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 TRMT2BQ96GJ1 504 aaKnown RBP11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 GNG8Q9UK08 70 aa11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 RGS9O75916 674 aaPredicted RBP11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 OXTRP30559 389 aa11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 GINS1Q14691 196 aa11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 DCDC5Q6ZRR9 648 aa11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 A0A0G2JPF8 293 aa11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 HNRNPCL3B7ZW38 293 aa11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 HNRNPCL4P0DMR1 293 aa11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 ARFRP1Q13795 201 aa11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 MFSD13AQ14CX5 517 aa11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 ANKRD13BQ86YJ7 626 aa11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 FTMTQ8N4E7 242 aa11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 OR10T2Q8NGX3 314 aa11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 PDLIM5Q96HC4 596 aaKnown RBP11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 SORT1Q99523 831 aa11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 DNAJC27Q9NZQ0 273 aa11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 ZNF69Q9UC07 566 aa11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 ARFGEF1Q9Y6D6 1849 aa11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 UNC119BA6NIH7 251 aa11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 M0R233 179 aa11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 ITGAMP11215 1152 aa11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 CSNK1DP48730 415 aa11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 IST1P53990 364 aa11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 MAZP56270 477 aaKnown RBP11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 OR12D2P58182 307 aa11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 TMEM164Q5U3C3 297 aa11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 CPEB1Q9BZB8 566 aaKnown RBP11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 UCKL1Q9NWZ5 548 aa11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 PCDHGA7Q9Y5G6 932 aa11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 OR6C70A6NIJ9 312 aa11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 RABGGTBP53611 331 aa11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 JAG1P78504 1218 aa11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 HSDL2Q6YN16 418 aa11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 GHDCQ8N2G8 530 aa11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 MLXQ9UH92 298 aa11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 ALG5Q9Y673 324 aa11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 SVILO95425 2214 aa11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 CDC40O60508 579 aaKnown RBP eCLIP11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 IFI30P13284 250 aa11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 LRRC73Q5JTD7 316 aa11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 GALNT12Q8IXK2 581 aa11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 Q8N402 240 aa11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 GRHL3Q8TE85 626 aa11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 ENAMQ9NRM1 1142 aa11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 GXYLT2A0PJZ3 443 aa11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 GKN3PP0CG01 181 aa11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 NUDT6P53370 316 aa11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.53□□□□□ -0.562e-7■■□□□ 13
CDC42BPA-203ENST00000366766 PIGKQ92643 395 aa11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 CNN2Q99439 309 aaKnown RBP11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 SMURF1Q9HCE7 757 aa11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 DNMT3AQ9Y6K1 912 aaPredicted RBP11.53□□□□□ -0.56
CDC42BPA-203ENST00000366766 CREB5Q02930 508 aa11.52□□□□□ -0.56
CDC42BPA-203ENST00000366766 DHCR24Q15392 516 aa11.52□□□□□ -0.56
CDC42BPA-203ENST00000366766 LINC00299Q6ZSB3 139 aa11.52□□□□□ -0.56
CDC42BPA-203ENST00000366766 HUS1BQ8NHY5 278 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms