RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 CHMP6Q96FZ7 201 aa11.56□□□□□ -0.56
MRPL55-209ENST00000366735 FAM111AQ96PZ2 611 aa11.56□□□□□ -0.56
MRPL55-209ENST00000366735 OR4K3Q96R72 315 aa11.56□□□□□ -0.56
MRPL55-209ENST00000366735 EGFL8Q99944 293 aa11.56□□□□□ -0.56
MRPL55-209ENST00000366735 NPLQ9BXD5 320 aaPredicted RBP11.56□□□□□ -0.56
MRPL55-209ENST00000366735 POPDC3Q9HBV1 291 aa11.56□□□□□ -0.56
MRPL55-209ENST00000366735 HPF1Q9NWY4 346 aa11.56□□□□□ -0.56
MRPL55-209ENST00000366735 YARS2Q9Y2Z4 477 aaKnown RBP11.56□□□□□ -0.56
MRPL55-209ENST00000366735 VWA7Q9Y334 891 aa11.56□□□□□ -0.56
MRPL55-209ENST00000366735 CCDC168Q8NDH2 2452 aa11.55□□□□□ -0.56
MRPL55-209ENST00000366735 AKAP9Q99996 3911 aa11.55□□□□□ -0.56
MRPL55-209ENST00000366735 A0A087X1B8 175 aa11.55□□□□□ -0.56
MRPL55-209ENST00000366735 A8MUA0 341 aa11.55□□□□□ -0.56
MRPL55-209ENST00000366735 KLF11O14901 512 aa11.55□□□□□ -0.56
MRPL55-209ENST00000366735 PLIN3O60664 434 aa11.55□□□□□ -0.56
MRPL55-209ENST00000366735 H2AFYO75367 372 aaKnown RBP11.55□□□□□ -0.56
MRPL55-209ENST00000366735 WISP3O95389 354 aaPredicted RBP11.55□□□□□ -0.56
MRPL55-209ENST00000366735 FAM107AO95990 144 aa11.55□□□□□ -0.56
MRPL55-209ENST00000366735 PROCP04070 461 aa11.55□□□□□ -0.56
MRPL55-209ENST00000366735 GNAZP19086 355 aa11.55□□□□□ -0.56
MRPL55-209ENST00000366735 TAC1P20366 129 aa11.55□□□□□ -0.56
MRPL55-209ENST00000366735 SAT1P21673 171 aa11.55□□□□□ -0.56
MRPL55-209ENST00000366735 SEC24CP53992 1094 aa11.55□□□□□ -0.56
MRPL55-209ENST00000366735 SLC12A2P55011 1212 aa11.55□□□□□ -0.56
MRPL55-209ENST00000366735 HSD17B7P56937 341 aa11.55□□□□□ -0.56
MRPL55-209ENST00000366735 CDKL1Q00532 357 aa11.55□□□□□ -0.56
MRPL55-209ENST00000366735 PLGLB1Q02325 96 aa11.55□□□□□ -0.56
MRPL55-209ENST00000366735 SLC13A2Q13183 592 aa11.55□□□□□ -0.56
MRPL55-209ENST00000366735 CCDC153Q494R4 210 aa11.55□□□□□ -0.56
MRPL55-209ENST00000366735 RNFT1Q5M7Z0 435 aa11.55□□□□□ -0.56
MRPL55-209ENST00000366735 NXPE4Q6UWF7 544 aa11.55□□□□□ -0.56
MRPL55-209ENST00000366735 THOC6Q86W42 341 aaKnown RBP11.55□□□□□ -0.56
MRPL55-209ENST00000366735 CHERPQ8IWX8 916 aaKnown RBP11.55□□□□□ -0.56
MRPL55-209ENST00000366735 SHISA5Q8N114 240 aa11.55□□□□□ -0.56
MRPL55-209ENST00000366735 KRT78Q8N1N4 520 aa11.55□□□□□ -0.56
MRPL55-209ENST00000366735 CA13Q8N1Q1 262 aa11.55□□□□□ -0.56
MRPL55-209ENST00000366735 NKAPQ8N5F7 415 aaKnown RBP11.55□□□□□ -0.56
MRPL55-209ENST00000366735 ZFP62Q8NB50 900 aaPredicted RBP11.55□□□□□ -0.56
MRPL55-209ENST00000366735 ACBD4Q8NC06 268 aa11.55□□□□□ -0.56
MRPL55-209ENST00000366735 APCDD1LQ8NCL9 501 aa11.55□□□□□ -0.56
MRPL55-209ENST00000366735 NFAM1Q8NET5 270 aaPredicted RBP11.55□□□□□ -0.56
MRPL55-209ENST00000366735 CREB3L4Q8TEY5 395 aa11.55□□□□□ -0.56
MRPL55-209ENST00000366735 ASB15Q8WXK1 588 aa11.55□□□□□ -0.56
MRPL55-209ENST00000366735 PDLIM5Q96HC4 596 aaKnown RBP11.55□□□□□ -0.56
MRPL55-209ENST00000366735 SEC16BQ96JE7 1060 aa11.55□□□□□ -0.56
MRPL55-209ENST00000366735 CCT8L2Q96SF2 557 aa11.55□□□□□ -0.56
MRPL55-209ENST00000366735 TREX2Q9BQ50 279 aaPredicted RBP11.55□□□□□ -0.56
MRPL55-209ENST00000366735 COPS7BQ9H9Q2 264 aaPredicted RBP11.55□□□□□ -0.56
MRPL55-209ENST00000366735 CAB39LQ9H9S4 337 aa11.55□□□□□ -0.56
MRPL55-209ENST00000366735 ADAP2Q9NPF8 381 aa11.55□□□□□ -0.56
MRPL55-209ENST00000366735 KCNJ16Q9NPI9 418 aa11.55□□□□□ -0.56
MRPL55-209ENST00000366735 NECTIN3Q9NQS3 549 aa11.55□□□□□ -0.56
MRPL55-209ENST00000366735 PRTFDC1Q9NRG1 225 aa11.55□□□□□ -0.56
MRPL55-209ENST00000366735 EMCNQ9ULC0 261 aa11.55□□□□□ -0.56
MRPL55-209ENST00000366735 ACOT9Q9Y305 439 aa11.55□□□□□ -0.56
MRPL55-209ENST00000366735 POLQO75417 2590 aa11.54□□□□□ -0.56
MRPL55-209ENST00000366735 FIGNL2A6NMB9 653 aa11.54□□□□□ -0.56
MRPL55-209ENST00000366735 FAM90A27PA6NNH2 459 aa11.54□□□□□ -0.56
MRPL55-209ENST00000366735 ADAM10O14672 748 aa11.54□□□□□ -0.56
MRPL55-209ENST00000366735 PHGDHO43175 533 aaKnown RBP11.54□□□□□ -0.56
MRPL55-209ENST00000366735 B3GALT2O43825 422 aa11.54□□□□□ -0.56
MRPL55-209ENST00000366735 ZFAND5O76080 213 aa11.54□□□□□ -0.56
MRPL55-209ENST00000366735 B3GALT4O96024 378 aa11.54□□□□□ -0.56
MRPL55-209ENST00000366735 DRD4P21917 467 aa11.54□□□□□ -0.56
MRPL55-209ENST00000366735 RFC3P40938 356 aa11.54□□□□□ -0.56
MRPL55-209ENST00000366735 RAB38P57729 211 aa11.54□□□□□ -0.56
MRPL55-209ENST00000366735 TIAL1Q01085 375 aaKnown RBP eCLIP11.54□□□□□ -0.56
MRPL55-209ENST00000366735 TGM3Q08188 693 aa11.54□□□□□ -0.56
MRPL55-209ENST00000366735 CMPK2Q5EBM0 449 aa11.54□□□□□ -0.56
MRPL55-209ENST00000366735 CES4AQ5XG92 561 aa11.54□□□□□ -0.56
MRPL55-209ENST00000366735 TRIM40Q6P9F5 258 aa11.54□□□□□ -0.56
MRPL55-209ENST00000366735 SBSNQ6UWP8 590 aa11.54□□□□□ -0.56
MRPL55-209ENST00000366735 GK5Q6ZS86 529 aa11.54□□□□□ -0.56
MRPL55-209ENST00000366735 RAPH1Q70E73 1250 aa11.54□□□□□ -0.56
MRPL55-209ENST00000366735 ADAMTSL2Q86TH1 951 aa11.54□□□□□ -0.56
MRPL55-209ENST00000366735 SLC22A16Q86VW1 577 aa11.54□□□□□ -0.56
MRPL55-209ENST00000366735 TMEM200AQ86VY9 491 aa11.54□□□□□ -0.56
MRPL55-209ENST00000366735 ZNF227Q86WZ6 799 aa11.54□□□□□ -0.56
MRPL55-209ENST00000366735 TRIM42Q8IWZ5 723 aa11.54□□□□□ -0.56
MRPL55-209ENST00000366735 CLYBLQ8N0X4 340 aa11.54□□□□□ -0.56
MRPL55-209ENST00000366735 TMEM132CQ8N3T6 1108 aa11.54□□□□□ -0.56
MRPL55-209ENST00000366735 ANKRD53Q8N9V6 530 aa11.54□□□□□ -0.56
MRPL55-209ENST00000366735 PSD4Q8NDX1 1056 aa11.54□□□□□ -0.56
MRPL55-209ENST00000366735 C7orf57Q8NEG2 295 aa11.54□□□□□ -0.56
MRPL55-209ENST00000366735 OR5M3Q8NGP4 307 aa11.54□□□□□ -0.56
MRPL55-209ENST00000366735 RAB3IL1Q8TBN0 382 aa11.54□□□□□ -0.56
MRPL55-209ENST00000366735 RDH11Q8TC12 318 aa11.54□□□□□ -0.56
MRPL55-209ENST00000366735 CCT6BQ92526 530 aa11.54□□□□□ -0.56
MRPL55-209ENST00000366735 DAZLQ92904 295 aaKnown RBP11.54□□□□□ -0.56
MRPL55-209ENST00000366735 NCLNQ969V3 563 aa11.54□□□□□ -0.56
MRPL55-209ENST00000366735 UBXN10Q96LJ8 280 aa11.54□□□□□ -0.56
MRPL55-209ENST00000366735 GPR78Q96P69 363 aa11.54□□□□□ -0.56
MRPL55-209ENST00000366735 CITED4Q96RK1 184 aa11.54□□□□□ -0.56
MRPL55-209ENST00000366735 ZNF559Q9BR84 538 aa11.54□□□□□ -0.56
MRPL55-209ENST00000366735 PITHD1Q9GZP4 211 aaPredicted RBP11.54□□□□□ -0.56
MRPL55-209ENST00000366735 SPNS1Q9H2V7 528 aa11.54□□□□□ -0.56
MRPL55-209ENST00000366735 C12orf65Q9H3J6 166 aaKnown RBP11.54□□□□□ -0.56
MRPL55-209ENST00000366735 PNO1Q9NRX1 252 aaKnown RBP11.54□□□□□ -0.56
MRPL55-209ENST00000366735 ZNF358Q9NW07 568 aa11.54□□□□□ -0.56
MRPL55-209ENST00000366735 TMEM216Q9P0N5 145 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms