RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 TBX6O95947 436 aaPredicted RBP7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 C1QAP02745 245 aa7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 MPC1LP0DKB6 136 aa7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 ARAFP10398 606 aa7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 GDF1P27539 372 aa7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 CPA2P48052 419 aa7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 CDK9P50750 372 aaKnown RBP7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 CCR8P51685 355 aa7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 NAGLUP54802 743 aa7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 UBASH3AP57075 661 aa7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 KCNJ2P63252 427 aa7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 BTN3A2P78410 334 aa7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 CCZ1BP86790 482 aa7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 CCZ1P86791 482 aaPredicted RBP7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 SLC13A2Q13183 592 aa7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 KLF1Q13351 362 aaPredicted RBP7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 ELAVL1Q15717 326 aaKnown RBP7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 CLEC12BQ2HXU8 276 aa7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 TOR1AIP1Q5JTV8 583 aa7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 PCID2Q5JVF3 399 aa7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 SLC22A10Q63ZE4 541 aa7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 ZNF474Q6S9Z5 364 aaPredicted RBP7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 OPN5Q6U736 354 aa7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 LCTLQ6UWM7 567 aa7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 TMEM64Q6YI46 380 aa7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 DGAT2L6Q6ZPD8 337 aa7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 SYDE1Q6ZW31 735 aaPredicted RBP7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 PLEKHM3Q6ZWE6 761 aa7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 STRA8Q7Z7C7 330 aa7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 ADGRE4PQ86SQ3 457 aa7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 LUZP1Q86V48 1076 aa7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 C9orf40Q8IXQ3 194 aa7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 CPNE9Q8IYJ1 553 aa7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 ALDH16A1Q8IZ83 802 aa7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 GCNT2Q8N0V5 402 aa7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 LIX1Q8N485 282 aa7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 TMEM151AQ8N4L1 468 aa7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 OTUD6BQ8N6M0 293 aa7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 TC2NQ8N9U0 490 aa7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 PPHLN1Q8NEY8 458 aaKnown RBP7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 SLC2A12Q8TD20 617 aa7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 CD200R1Q8TD46 325 aa7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 DOK4Q8TEW6 326 aa7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 ZNF721Q8TF20 911 aa7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 NEIL2Q969S2 332 aa7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 INTS12Q96CB8 462 aaKnown RBP7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 SPACA9Q96E40 222 aaPredicted RBP7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 QRFPRQ96P65 431 aa7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 FAM129AQ9BZQ8 928 aa7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 PCBD2Q9H0N5 130 aa7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 QPCTLQ9NXS2 382 aa7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 ZFP69BQ9UJL9 534 aa7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 INTUQ9ULD6 942 aa7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 GPC6Q9Y625 555 aaPredicted RBP7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 A0A096LNT2 108 aa7.72□□□□□ -1.17
HMGB1P39-201ENST00000366304 ERI2A8K979 691 aaKnown RBP7.72□□□□□ -1.17
HMGB1P39-201ENST00000366304 H3BMM5 538 aa7.72□□□□□ -1.17
HMGB1P39-201ENST00000366304 ZBTB14O43829 449 aa7.72□□□□□ -1.17
HMGB1P39-201ENST00000366304 AVILO75366 819 aa7.72□□□□□ -1.17
HMGB1P39-201ENST00000366304 IFNA16P05015 189 aa7.72□□□□□ -1.17
HMGB1P39-201ENST00000366304 HPNP05981 417 aa7.72□□□□□ -1.17
HMGB1P39-201ENST00000366304 THBDP07204 575 aa7.72□□□□□ -1.17
HMGB1P39-201ENST00000366304 ZSCAN5DPP0CG00 497 aa7.72□□□□□ -1.17
HMGB1P39-201ENST00000366304 HNRNPH1P31943 449 aaKnown RBP7.72□□□□□ -1.17
HMGB1P39-201ENST00000366304 RPL22P35268 128 aaKnown RBP7.72□□□□□ -1.17
HMGB1P39-201ENST00000366304 CPOXP36551 454 aa7.72□□□□□ -1.17
HMGB1P39-201ENST00000366304 HSD17B7P56937 341 aa7.72□□□□□ -1.17
HMGB1P39-201ENST00000366304 REEP5Q00765 189 aa7.72□□□□□ -1.17
HMGB1P39-201ENST00000366304 ID2Q02363 134 aa7.72□□□□□ -1.17
HMGB1P39-201ENST00000366304 RGS1Q08116 209 aa7.72□□□□□ -1.17
HMGB1P39-201ENST00000366304 CTBP1Q13363 440 aa7.72□□□□□ -1.17
HMGB1P39-201ENST00000366304 VEZF1Q14119 521 aa7.72□□□□□ -1.17
HMGB1P39-201ENST00000366304 MPEG1Q2M385 716 aa7.72□□□□□ -1.17
HMGB1P39-201ENST00000366304 NHSL2Q5HYW2 709 aa7.72□□□□□ -1.17
HMGB1P39-201ENST00000366304 WIPI1Q5MNZ9 446 aaPredicted RBP7.72□□□□□ -1.17
HMGB1P39-201ENST00000366304 UGT3A1Q6NUS8 523 aa7.72□□□□□ -1.17
HMGB1P39-201ENST00000366304 SLCO4C1Q6ZQN7 724 aa7.72□□□□□ -1.17
HMGB1P39-201ENST00000366304 DNM1P46Q6ZS02 220 aa7.72□□□□□ -1.17
HMGB1P39-201ENST00000366304 CLEC17AQ6ZS10 378 aa7.72□□□□□ -1.17
HMGB1P39-201ENST00000366304 CILP2Q8IUL8 1156 aa7.72□□□□□ -1.17
HMGB1P39-201ENST00000366304 TMEM132CQ8N3T6 1108 aa7.72□□□□□ -1.17
HMGB1P39-201ENST00000366304 ARIH2OSQ8N7S6 290 aa7.72□□□□□ -1.17
HMGB1P39-201ENST00000366304 ZNF441Q8N8Z8 693 aa7.72□□□□□ -1.17
HMGB1P39-201ENST00000366304 MORN4Q8NDC4 146 aa7.72□□□□□ -1.17
HMGB1P39-201ENST00000366304 OR8K3Q8NH51 312 aa7.72□□□□□ -1.17
HMGB1P39-201ENST00000366304 ROBO4Q8WZ75 1007 aa7.72□□□□□ -1.17
HMGB1P39-201ENST00000366304 NTNG2Q96CW9 530 aa7.72□□□□□ -1.17
HMGB1P39-201ENST00000366304 ZBED6CLQ96FA7 236 aaPredicted RBP7.72□□□□□ -1.17
HMGB1P39-201ENST00000366304 SNF8Q96H20 258 aa7.72□□□□□ -1.17
HMGB1P39-201ENST00000366304 TSNARE1Q96NA8 513 aa7.72□□□□□ -1.17
HMGB1P39-201ENST00000366304 GNRHR2Q96P88 292 aa7.72□□□□□ -1.17
HMGB1P39-201ENST00000366304 PANX2Q96RD6 677 aa7.72□□□□□ -1.17
HMGB1P39-201ENST00000366304 GPR21Q99679 349 aa7.72□□□□□ -1.17
HMGB1P39-201ENST00000366304 SFXN3Q9BWM7 321 aa7.72□□□□□ -1.17
HMGB1P39-201ENST00000366304 ALOXE3Q9BYJ1 711 aa7.72□□□□□ -1.17
HMGB1P39-201ENST00000366304 NAT10Q9H0A0 1025 aaKnown RBP7.72□□□□□ -1.17
HMGB1P39-201ENST00000366304 CLK4Q9HAZ1 481 aaKnown RBP7.72□□□□□ -1.17
HMGB1P39-201ENST00000366304 SYBUQ9NX95 663 aa7.72□□□□□ -1.17
HMGB1P39-201ENST00000366304 IFNKQ9P0W0 207 aa7.72□□□□□ -1.17
HMGB1P39-201ENST00000366304 VTI1BQ9UEU0 232 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms