RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 SOHLH2Q9NX45 425 aa3.18□□□□□ -1.9
RNU6-28P-201ENST00000362378 DIMT1Q9UNQ2 313 aaKnown RBP3.18□□□□□ -1.9
RNU6-28P-201ENST00000362378 MRPS28Q9Y2Q9 187 aaKnown RBP3.18□□□□□ -1.9
RNU6-28P-201ENST00000362378 ZMYM6O95789 1325 aa3.18□□□□□ -1.9
RNU6-28P-201ENST00000362378 LOC105371242A0A075B767 164 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 A0A087WYN8 130 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 PRR23AA6NEV1 266 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 G3V2L1 256 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 INPP4BO15327 924 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 KRT86O43790 486 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 NXPH4O95158 308 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 LYNP07948 512 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 DESP17661 470 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 FUT1P19526 365 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 PRKACGP22612 351 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 CHRNA3P32297 505 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 ZFP36L2P47974 494 aaKnown RBP3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 SLC6A8P48029 635 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 CRYBA2P53672 197 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 ERVK-16P61578 105 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 CDKL1Q00532 357 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 SPP2Q13103 211 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 KRT81Q14533 505 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 PDIA5Q14554 519 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 KARSQ15046 597 aaKnown RBP3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 CARTPTQ16568 116 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 CMPK2Q5EBM0 449 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 LIPJQ5W064 366 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 RAET1GQ6H3X3 334 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 RTL6Q6ICC9 239 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 CDC42EP5Q6NZY7 148 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 TRIM65Q6PJ69 517 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 ISLR2Q6UXK2 745 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 UNC5DQ6UXZ4 953 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 KIF6Q6ZMV9 814 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 BNIPLQ7Z465 357 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 PARP8Q8N3A8 854 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 LRRC17Q8N6Y2 441 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 GVQW1Q8N7I0 195 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 NUP37Q8NFH4 326 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 ZNF519Q8TB69 540 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 ATP8B4Q8TF62 1192 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 TCP11Q8WWU5 503 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 C11orf52Q96A22 123 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 C16orf58Q96GQ5 468 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 C16orf45Q96MC5 204 aaPredicted RBP3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 DCTN5Q9BTE1 182 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 DGCR6LQ9BY27 220 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 NMNAT2Q9BZQ4 307 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 RAB17Q9H0T7 212 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 CXXC4Q9H2H0 198 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 LIN28AQ9H9Z2 209 aaKnown RBP3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 UBE2TQ9NPD8 197 aaPredicted RBP3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 NGBQ9NPG2 151 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 GDF3Q9NR23 364 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 POLE3Q9NRF9 147 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 NLGN3Q9NZ94 848 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 ERVK-18Q9QC07 812 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 CACNG5Q9UF02 275 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 PLA2G4CQ9UP65 541 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 ATP6V0A2Q9Y487 856 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 RNF215Q9Y6U7 377 aa3.17□□□□□ -1.9
RNU6-28P-201ENST00000362378 OR5H15A6NDH6 313 aa3.16□□□□□ -1.9
RNU6-28P-201ENST00000362378 TRAFD1O14545 582 aaPredicted RBP3.16□□□□□ -1.9
RNU6-28P-201ENST00000362378 IKBKBO14920 756 aa3.16□□□□□ -1.9
RNU6-28P-201ENST00000362378 EDIL3O43854 480 aa3.16□□□□□ -1.9
RNU6-28P-201ENST00000362378 CSO75390 466 aaKnown RBP3.16□□□□□ -1.9
RNU6-28P-201ENST00000362378 FHP07954 510 aa3.16□□□□□ -1.9
RNU6-28P-201ENST00000362378 GNSP15586 552 aa3.16□□□□□ -1.9
RNU6-28P-201ENST00000362378 SELEP16581 610 aa3.16□□□□□ -1.9
RNU6-28P-201ENST00000362378 PDHA2P29803 388 aa3.16□□□□□ -1.9
RNU6-28P-201ENST00000362378 PRDX6P30041 224 aa3.16□□□□□ -1.9
RNU6-28P-201ENST00000362378 ACADSBP45954 432 aa3.16□□□□□ -1.9
RNU6-28P-201ENST00000362378 GSCP56915 257 aaPredicted RBP3.16□□□□□ -1.9
RNU6-28P-201ENST00000362378 SLC26A5P58743 744 aa3.16□□□□□ -1.9
RNU6-28P-201ENST00000362378 NLRP11P59045 1033 aaKnown RBP3.16□□□□□ -1.9
RNU6-28P-201ENST00000362378 SNX1Q13596 522 aa3.16□□□□□ -1.9
RNU6-28P-201ENST00000362378 GCKRQ14397 625 aa3.16□□□□□ -1.9
RNU6-28P-201ENST00000362378 TRADDQ15628 312 aa3.16□□□□□ -1.9
RNU6-28P-201ENST00000362378 CEBPEQ15744 281 aa3.16□□□□□ -1.9
RNU6-28P-201ENST00000362378 FAM189A2Q15884 450 aa3.16□□□□□ -1.9
RNU6-28P-201ENST00000362378 ZSWIM7Q19AV6 140 aa3.16□□□□□ -1.9
RNU6-28P-201ENST00000362378 ZNF528Q3MIS6 628 aa3.16□□□□□ -1.9
RNU6-28P-201ENST00000362378 ZFP69Q49AA0 526 aa3.16□□□□□ -1.9
RNU6-28P-201ENST00000362378 IL23RQ5VWK5 629 aa3.16□□□□□ -1.9
RNU6-28P-201ENST00000362378 NEPROQ6NW34 567 aa3.16□□□□□ -1.9
RNU6-28P-201ENST00000362378 IRGCQ6NXR0 463 aa3.16□□□□□ -1.9
RNU6-28P-201ENST00000362378 ZNF730Q6ZMV8 503 aa3.16□□□□□ -1.9
RNU6-28P-201ENST00000362378 TMEM26Q6ZUK4 368 aa3.16□□□□□ -1.9
RNU6-28P-201ENST00000362378 MINDY2Q8NBR6 621 aa3.16□□□□□ -1.9
RNU6-28P-201ENST00000362378 ZBTB44Q8NCP5 570 aa3.16□□□□□ -1.9
RNU6-28P-201ENST00000362378 MRPL24Q96A35 216 aaKnown RBP3.16□□□□□ -1.9
RNU6-28P-201ENST00000362378 TMEM45BQ96B21 275 aa3.16□□□□□ -1.9
RNU6-28P-201ENST00000362378 CNRIP1Q96F85 164 aaPredicted RBP3.16□□□□□ -1.9
RNU6-28P-201ENST00000362378 CAPNS2Q96L46 248 aa3.16□□□□□ -1.9
RNU6-28P-201ENST00000362378 NSMCE3Q96MG7 304 aa3.16□□□□□ -1.9
RNU6-28P-201ENST00000362378 ALKBH3Q96Q83 286 aaPredicted RBP3.16□□□□□ -1.9
RNU6-28P-201ENST00000362378 SYT15Q9BQS2 421 aa3.16□□□□□ -1.9
RNU6-28P-201ENST00000362378 TMEM231Q9H6L2 316 aa3.16□□□□□ -1.9
RNU6-28P-201ENST00000362378 ECT2Q9H8V3 914 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms