RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 FAM129BQ96TA1 746 aa18.17■□□□□ 0.5
CMTM3-201ENST00000361909 KLHL42Q9P2K6 505 aa18.17■□□□□ 0.5
CMTM3-201ENST00000361909 CCL26Q9Y258 94 aa18.17■□□□□ 0.5
CMTM3-201ENST00000361909 ZNF106Q9H2Y7 1883 aaKnown RBP18.17■□□□□ 0.5
CMTM3-201ENST00000361909 C1orf226A1L170 272 aa18.16■□□□□ 0.5
CMTM3-201ENST00000361909 CSF2P04141 144 aa18.16■□□□□ 0.5
CMTM3-201ENST00000361909 SOX3P41225 446 aa18.16■□□□□ 0.5
CMTM3-201ENST00000361909 RGNQ15493 299 aa18.16■□□□□ 0.5
CMTM3-201ENST00000361909 ZNF628Q5EBL2 1059 aa18.16■□□□□ 0.5
CMTM3-201ENST00000361909 GPRC6AQ5T6X5 926 aa18.16■□□□□ 0.5
CMTM3-201ENST00000361909 CAMKMTQ7Z624 323 aa18.16■□□□□ 0.5
CMTM3-201ENST00000361909 NANOGP1Q8N7R0 232 aa18.16■□□□□ 0.5
CMTM3-201ENST00000361909 TP53I13Q8NBR0 393 aaPredicted RBP18.16■□□□□ 0.5
CMTM3-201ENST00000361909 NLGN4YQ8NFZ3 816 aaPredicted RBP18.16■□□□□ 0.5
CMTM3-201ENST00000361909 MTFMTQ96DP5 389 aaKnown RBP18.16■□□□□ 0.5
CMTM3-201ENST00000361909 APIPQ96GX9 242 aa18.16■□□□□ 0.5
CMTM3-201ENST00000361909 PIP5K1AQ99755 562 aa18.16■□□□□ 0.5
CMTM3-201ENST00000361909 AIFM2Q9BRQ8 373 aa18.16■□□□□ 0.5
CMTM3-201ENST00000361909 SMG9Q9H0W8 520 aaKnown RBP18.16■□□□□ 0.5
CMTM3-201ENST00000361909 NKX2-4Q9H2Z4 354 aa18.16■□□□□ 0.5
CMTM3-201ENST00000361909 BPIFA1Q9NP55 256 aa18.16■□□□□ 0.5
CMTM3-201ENST00000361909 ZNF282Q9UDV7 671 aaPredicted RBP18.16■□□□□ 0.5
CMTM3-201ENST00000361909 TSR3Q9UJK0 312 aaKnown RBP18.16■□□□□ 0.5
CMTM3-201ENST00000361909 RPL36Q9Y3U8 105 aaKnown RBP18.16■□□□□ 0.5
CMTM3-201ENST00000361909 ATG2AQ2TAZ0 1938 aa18.16■□□□□ 0.5
CMTM3-201ENST00000361909 CDRT1O95170 752 aa18.15■□□□□ 0.5
CMTM3-201ENST00000361909 CPSF4O95639 269 aaKnown RBP18.15■□□□□ 0.5
CMTM3-201ENST00000361909 ADRA2AP08913 450 aa18.15■□□□□ 0.5
CMTM3-201ENST00000361909 EPORP19235 508 aa18.15■□□□□ 0.5
CMTM3-201ENST00000361909 HNRNPA0Q13151 305 aaKnown RBP18.15■□□□□ 0.5
CMTM3-201ENST00000361909 KCNC3Q14003 757 aa18.15■□□□□ 0.5
CMTM3-201ENST00000361909 LAS2Q8IYD9 372 aa18.15■□□□□ 0.5
CMTM3-201ENST00000361909 AKAP1Q92667 903 aaKnown RBP eCLIP18.15■□□□□ 0.52e-6■■■□□ 17.2
CMTM3-201ENST00000361909 OTUB2Q96DC9 234 aa18.15■□□□□ 0.5
CMTM3-201ENST00000361909 C2orf49Q9BVC5 232 aaPredicted RBP18.15■□□□□ 0.5
CMTM3-201ENST00000361909 CERS4Q9HA82 394 aa18.15■□□□□ 0.5
CMTM3-201ENST00000361909 MAT2BQ9NZL9 334 aa18.15■□□□□ 0.5
CMTM3-201ENST00000361909 PLEKHB1Q9UF11 243 aaPredicted RBP18.15■□□□□ 0.5
CMTM3-201ENST00000361909 CHD7Q9P2D1 2997 aa18.15■□□□□ 0.5
CMTM3-201ENST00000361909 SNTNA6NMZ2 147 aa18.15■□□□□ 0.5
CMTM3-201ENST00000361909 RFPL3O75679 317 aa18.15■□□□□ 0.5
CMTM3-201ENST00000361909 CD160O95971 181 aa18.15■□□□□ 0.5
CMTM3-201ENST00000361909 IFNA14P01570 189 aa18.15■□□□□ 0.5
CMTM3-201ENST00000361909 PDGFAP04085 211 aa18.15■□□□□ 0.5
CMTM3-201ENST00000361909 FAM157BP0CG42 384 aa18.15■□□□□ 0.5
CMTM3-201ENST00000361909 HLA-EP13747 358 aa18.15■□□□□ 0.5
CMTM3-201ENST00000361909 NAGAP17050 411 aa18.15■□□□□ 0.5
CMTM3-201ENST00000361909 CSKP41240 450 aa18.15■□□□□ 0.5
CMTM3-201ENST00000361909 NTHL1P78549 312 aa18.15■□□□□ 0.5
CMTM3-201ENST00000361909 HOXC5Q00444 222 aa18.15■□□□□ 0.5
CMTM3-201ENST00000361909 ARHGEF7Q14155 803 aa18.15■□□□□ 0.5
CMTM3-201ENST00000361909 ZNF77Q15935 545 aa18.15■□□□□ 0.5
CMTM3-201ENST00000361909 ZNF697Q5TEC3 545 aa18.15■□□□□ 0.5
CMTM3-201ENST00000361909 FRMPD2BQ6IN97 320 aa18.15■□□□□ 0.5
CMTM3-201ENST00000361909 PAMR1Q6UXH9 720 aa18.15■□□□□ 0.5
CMTM3-201ENST00000361909 MACC1Q6ZN28 852 aa18.15■□□□□ 0.5
CMTM3-201ENST00000361909 SERPINA9Q86WD7 417 aa18.15■□□□□ 0.5
CMTM3-201ENST00000361909 PHC2Q8IXK0 858 aa18.15■□□□□ 0.5
CMTM3-201ENST00000361909 C9orf62Q8N4C0 152 aa18.15■□□□□ 0.5
CMTM3-201ENST00000361909 ZNF557Q8N988 423 aaPredicted RBP18.15■□□□□ 0.5
CMTM3-201ENST00000361909 TTC16Q8NEE8 873 aa18.15■□□□□ 0.5
CMTM3-201ENST00000361909 TOR1AIP2Q8NFQ8 470 aa18.15■□□□□ 0.5
CMTM3-201ENST00000361909 EXOC2Q96KP1 924 aa18.15■□□□□ 0.5
CMTM3-201ENST00000361909 GPR137Q96N19 417 aa18.15■□□□□ 0.5
CMTM3-201ENST00000361909 POLR2J2Q9GZM3 115 aaKnown RBP18.15■□□□□ 0.5
CMTM3-201ENST00000361909 SLC28A3Q9HAS3 691 aa18.15■□□□□ 0.5
CMTM3-201ENST00000361909 TXNL4BQ9NX01 149 aaKnown RBP18.15■□□□□ 0.5
CMTM3-201ENST00000361909 ELF5Q9UKW6 265 aaPredicted RBP18.15■□□□□ 0.5
CMTM3-201ENST00000361909 TMCC3Q9ULS5 477 aa18.15■□□□□ 0.5
CMTM3-201ENST00000361909 VPS4AQ9UN37 437 aa18.15■□□□□ 0.5
CMTM3-201ENST00000361909 RUVBL1Q9Y265 456 aaKnown RBP18.15■□□□□ 0.5
CMTM3-201ENST00000361909 MRPS23Q9Y3D9 190 aaKnown RBP18.15■□□□□ 0.5
CMTM3-201ENST00000361909 ASB4Q9Y574 426 aa18.15■□□□□ 0.5
CMTM3-201ENST00000361909 DSPPQ9NZW4 1301 aa18.15■□□□□ 0.5
CMTM3-201ENST00000361909 SLC25A14O95258 325 aaPredicted RBP18.14■□□□□ 0.49
CMTM3-201ENST00000361909 SLC2A2P11168 524 aaPredicted RBP18.14■□□□□ 0.49
CMTM3-201ENST00000361909 PTGS2P35354 604 aa18.14■□□□□ 0.49
CMTM3-201ENST00000361909 HMGCLP35914 325 aa18.14■□□□□ 0.49
CMTM3-201ENST00000361909 XCR1P46094 333 aa18.14■□□□□ 0.49
CMTM3-201ENST00000361909 SF3A2Q15428 464 aaKnown RBP18.14■□□□□ 0.49
CMTM3-201ENST00000361909 FAM205BPQ63HN1 556 aa18.14■□□□□ 0.49
CMTM3-201ENST00000361909 FRG2Q64ET8 278 aa18.14■□□□□ 0.49
CMTM3-201ENST00000361909 BICRALQ6AI39 1079 aa18.14■□□□□ 0.49
CMTM3-201ENST00000361909 METTL3Q86U44 580 aaKnown RBP18.14■□□□□ 0.49
CMTM3-201ENST00000361909 SLC34A3Q8N130 599 aa18.14■□□□□ 0.49
CMTM3-201ENST00000361909 WFDC5Q8TCV5 224 aa18.14■□□□□ 0.49
CMTM3-201ENST00000361909 SMG7Q92540 1137 aaKnown RBP18.14■□□□□ 0.49
CMTM3-201ENST00000361909 MYO19Q96H55 970 aa18.14■□□□□ 0.49
CMTM3-201ENST00000361909 KCTD7Q96MP8 289 aa18.14■□□□□ 0.49
CMTM3-201ENST00000361909 FRG2BQ96QU4 278 aa18.14■□□□□ 0.49
CMTM3-201ENST00000361909 DUSP26Q9BV47 211 aa18.14■□□□□ 0.49
CMTM3-201ENST00000361909 PRRG3Q9BZD7 231 aa18.14■□□□□ 0.49
CMTM3-201ENST00000361909 PIGUQ9H490 435 aa18.14■□□□□ 0.49
CMTM3-201ENST00000361909 NT5DC2Q9H857 520 aa18.14■□□□□ 0.49
CMTM3-201ENST00000361909 SFXN1Q9H9B4 322 aa18.14■□□□□ 0.49
CMTM3-201ENST00000361909 LATS2Q9NRM7 1088 aa18.14■□□□□ 0.49
CMTM3-201ENST00000361909 CHD9Q3L8U1 2897 aa18.14■□□□□ 0.49
CMTM3-201ENST00000361909 FAM240BA0A1B0GVZ2 78 aa18.14■□□□□ 0.49
CMTM3-201ENST00000361909 SGK494L7N484 410 aa18.14■□□□□ 0.49
CMTM3-201ENST00000361909 STK25O00506 426 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms