RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 TREX2Q9BQ50 279 aaPredicted RBP9.31□□□□□ -0.92
CUX1-203ENST00000360264 SLC6A16Q9GZN6 736 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 NCDNQ9UBB6 729 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 REXO2Q9Y3B8 237 aaKnown RBP9.31□□□□□ -0.92
CUX1-203ENST00000360264 KIAA1217Q5T5P2 1943 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 CHRNA6Q15825 494 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 ZNF404Q494X3 552 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 HSD17B12Q53GQ0 312 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 AGTRAPQ6RW13 159 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 GAL3ST1Q99999 423 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 COL20A1Q9P218 1284 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 HCN2Q9UL51 889 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 A0A1B0GVT2 93 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 DPPA5A6NC42 116 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 AXIN1O15169 862 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 LHCGRP22888 699 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 RRAS2P62070 204 aaPredicted RBP9.31□□□□□ -0.92
CUX1-203ENST00000360264 GK3PQ14409 553 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 CLCA4Q14CN2 919 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 SERINC5Q86VE9 423 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 GALNT15Q8N3T1 639 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 RCBTB1Q8NDN9 531 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 GIMAP5Q96F15 307 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 ZNF382Q96SR6 550 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 TSSK6Q9BXA6 273 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 OSBPL7Q9BZF2 842 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 BMP6P22004 513 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 SDHAF2Q9NX18 166 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 MDFIC2A0A1B0GVS7 189 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 A6NLC8 198 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 LAMTOR5O43504 91 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 BRINP1O60477 761 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 GALTP07902 379 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 TEAD2Q15562 447 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 ANKRD22Q5VYY1 191 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 ZNF773Q6PK81 442 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 TICAM1Q8IUC6 712 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 NETO2Q8NC67 525 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 CD300LFQ8TDQ1 290 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 OR1F2PQ96R84 312 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 PLEKHA3Q9HB20 300 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 NAALAD2Q9Y3Q0 740 aa9.31□□□□□ -0.92
CUX1-203ENST00000360264 RGS9O75916 674 aaPredicted RBP9.3□□□□□ -0.92
CUX1-203ENST00000360264 LMO2P25791 158 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 OR52E8Q6IFG1 317 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 PIM3Q86V86 326 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 TRIM43Q96BQ3 446 aaPredicted RBP9.3□□□□□ -0.92
CUX1-203ENST00000360264 HS6ST2Q96MM7 605 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 PFDN5Q99471 154 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 C7orf50Q9BRJ6 194 aaKnown RBP9.3□□□□□ -0.92
CUX1-203ENST00000360264 MROH1Q8NDA8 1641 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 MPC1LP0DKB6 136 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 NELFEP18615 380 aaKnown RBP9.3□□□□□ -0.92
CUX1-203ENST00000360264 HTR2AP28223 471 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 TAS2R39P59534 338 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 ZNF169Q14929 603 aaPredicted RBP9.3□□□□□ -0.92
CUX1-203ENST00000360264 GPRC6AQ5T6X5 926 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 C1orf74Q96LT6 269 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 FAM189A1O60320 539 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 ABCB7O75027 752 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 RBBP9O75884 186 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 H2BFMP0C1H6 154 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 EDNRBP24530 442 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 FXYD6P3P58550 94 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 SLC18A2Q05940 514 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 KIAA1614Q5VZ46 1190 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 FAM208AQ9UK61 1670 aaKnown RBP9.3□□□□□ -0.92
CUX1-203ENST00000360264 LILRB3O75022 631 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 RBPJQ06330 500 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 PLXDC1Q8IUK5 500 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 C4orf32Q8N8J7 132 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 SYT3Q9BQG1 590 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 FZD8Q9H461 694 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 ZBTB26Q9HCK0 441 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 OAZ3Q9UMX2 235 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 IFNA10P01566 189 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 HNRNPA1P09651 372 aaKnown RBP eCLIP9.3□□□□□ -0.92
CUX1-203ENST00000360264 ZNF33BQ06732 778 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 SERINC3Q13530 473 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 LY6G5CQ5SRR4 150 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 H7C2Y5 167 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 TGM5O43548 720 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 GABRA3P34903 492 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 AADACL4Q5VUY2 407 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 TRMT10BQ6PF06 316 aaKnown RBP9.3□□□□□ -0.92
CUX1-203ENST00000360264 Q8N9G6 341 aaPredicted RBP9.3□□□□□ -0.92
CUX1-203ENST00000360264 PTCHD1Q96NR3 888 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 HRASLS2Q9NWW9 162 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 MAB21L2Q9Y586 359 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 LRRTM2O43300 516 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 TM4SF1P30408 202 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 DNASE1L3Q13609 305 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 SLC35F5Q8WV83 523 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 CDH20Q9HBT6 801 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 SLC6A14Q9UN76 642 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 HHLA1C9JL84 531 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 HTR3AP46098 478 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 IRF9Q00978 393 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 QPCTQ16769 361 aa9.3□□□□□ -0.92
CUX1-203ENST00000360264 NEIL3Q8TAT5 605 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms