RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 C6orf120Q7Z4R8 191 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 ZNF598Q86UK7 904 aaKnown RBP4.65□□□□□ -1.66
SCN3A-202ENST00000360093 SIX5Q8N196 739 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 NAT6Q93015 286 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 PPP1R14BQ96C90 147 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 ACTRT3Q9BYD9 372 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 KLHL21Q9UJP4 597 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 MKL2Q9ULH7 1088 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 FKBP7Q9Y680 259 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 RBMXL2O75526 392 aaKnown RBP4.65□□□□□ -1.66
SCN3A-202ENST00000360093 CLEC3AO75596 197 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 RASAL1O95294 804 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 CER1O95813 267 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 HTR1AP08908 422 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 EIF2DP41214 584 aaKnown RBP4.65□□□□□ -1.66
SCN3A-202ENST00000360093 ZNF140P52738 457 aaPredicted RBP4.65□□□□□ -1.66
SCN3A-202ENST00000360093 ACTA2P62736 377 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 ACTG2P63267 376 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 CBLBQ13191 982 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 OR4D1Q15615 310 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 CARM1Q86X55 608 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 YIPF7Q8N8F6 280 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 OR5T3Q8NGG3 340 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 C1orf216Q8TAB5 229 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 TNFAIP8L1Q8WVP5 186 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 PKP2Q99959 881 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 TSSK6Q9BXA6 273 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 SLC46A2Q9BY10 475 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 LMAN1LQ9HAT1 526 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 GLS2Q9UI32 602 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 SRPK3Q9UPE1 567 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 PCDHB14Q9Y5E9 798 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 A0A0J9YY10 115 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 POLR1CO15160 346 aaPredicted RBP4.65□□□□□ -1.66
SCN3A-202ENST00000360093 GPR37L1O60883 481 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 KLHL18O94889 574 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 CSTBP04080 98 aaKnown RBP4.65□□□□□ -1.66
SCN3A-202ENST00000360093 PROS1P07225 676 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 C8orf89P0DMQ9 161 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 IFI30P13284 250 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 EDNRAP25101 427 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 RBMS1P29558 406 aaKnown RBP4.65□□□□□ -1.66
SCN3A-202ENST00000360093 CLRN1P58418 232 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 PLP2Q04941 152 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 DEFB134Q4QY38 66 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 OLFML2AQ68BL7 652 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 PLCZ1Q86YW0 608 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 FTMTQ8N4E7 242 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 CHST14Q8NCH0 376 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 OR6N1Q8NGY5 312 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 DNAJA4Q8WW22 397 aaPredicted RBP4.65□□□□□ -1.66
SCN3A-202ENST00000360093 PIGKQ92643 395 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 TSACCQ96A04 125 aaPredicted RBP4.65□□□□□ -1.66
SCN3A-202ENST00000360093 TMEM74Q96NL1 305 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 IL4I1Q96RQ9 567 aa4.65□□□□□ -1.66
SCN3A-202ENST00000360093 NPIPB15A6NHN6 443 aaPredicted RBP4.65□□□□□ -1.67
SCN3A-202ENST00000360093 E7EQ34 232 aa4.65□□□□□ -1.67
SCN3A-202ENST00000360093 RNF13O43567 381 aa4.65□□□□□ -1.67
SCN3A-202ENST00000360093 ABCB7O75027 752 aa4.65□□□□□ -1.67
SCN3A-202ENST00000360093 OPN1SWP03999 348 aa4.65□□□□□ -1.67
SCN3A-202ENST00000360093 HSD17B1P14061 328 aa4.65□□□□□ -1.67
SCN3A-202ENST00000360093 CKMT2P17540 419 aa4.65□□□□□ -1.67
SCN3A-202ENST00000360093 OR3A3P47888 321 aa4.65□□□□□ -1.67
SCN3A-202ENST00000360093 OR3A2P47893 321 aa4.65□□□□□ -1.67
SCN3A-202ENST00000360093 SLC6A8P48029 635 aa4.65□□□□□ -1.67
SCN3A-202ENST00000360093 CXCL12P48061 93 aa4.65□□□□□ -1.67
SCN3A-202ENST00000360093 DIO3P55073 304 aa4.65□□□□□ -1.67
SCN3A-202ENST00000360093 DCDC1P59894 354 aa4.65□□□□□ -1.67
SCN3A-202ENST00000360093 EIF5AP63241 154 aaKnown RBP4.65□□□□□ -1.67
SCN3A-202ENST00000360093 IDNKQ5T6J7 187 aa4.65□□□□□ -1.67
SCN3A-202ENST00000360093 TMEM225Q6GV28 225 aa4.65□□□□□ -1.67
SCN3A-202ENST00000360093 ZNF773Q6PK81 442 aa4.65□□□□□ -1.67
SCN3A-202ENST00000360093 SLC15A3Q8IY34 581 aa4.65□□□□□ -1.67
SCN3A-202ENST00000360093 C3orf58Q8NDZ4 430 aa4.65□□□□□ -1.67
SCN3A-202ENST00000360093 OR52N2Q8NGI0 321 aa4.65□□□□□ -1.67
SCN3A-202ENST00000360093 RPLP0P6Q8NHW5 317 aa4.65□□□□□ -1.67
SCN3A-202ENST00000360093 CD200R1Q8TD46 325 aa4.65□□□□□ -1.67
SCN3A-202ENST00000360093 SORCS1Q8WY21 1168 aa4.65□□□□□ -1.67
SCN3A-202ENST00000360093 COQ8BQ96D53 544 aa4.65□□□□□ -1.67
SCN3A-202ENST00000360093 GORASP1Q9BQQ3 440 aa4.65□□□□□ -1.67
SCN3A-202ENST00000360093 MED28Q9H204 178 aa4.65□□□□□ -1.67
SCN3A-202ENST00000360093 IL21RQ9HBE5 538 aa4.65□□□□□ -1.67
SCN3A-202ENST00000360093 BTNL2Q9UIR0 455 aa4.65□□□□□ -1.67
SCN3A-202ENST00000360093 RNASET2O00584 256 aaKnown RBP4.65□□□□□ -1.67
SCN3A-202ENST00000360093 HCRTR2O43614 444 aa4.65□□□□□ -1.67
SCN3A-202ENST00000360093 LDB2O43679 373 aa4.65□□□□□ -1.67
SCN3A-202ENST00000360093 TLX2O43763 284 aaPredicted RBP4.65□□□□□ -1.67
SCN3A-202ENST00000360093 SLITRK5O94991 958 aa4.65□□□□□ -1.67
SCN3A-202ENST00000360093 TSPAN5P62079 268 aa4.65□□□□□ -1.67
SCN3A-202ENST00000360093 ADAM17P78536 824 aa4.65□□□□□ -1.67
SCN3A-202ENST00000360093 PLCXD2Q0VAA5 305 aa4.65□□□□□ -1.67
SCN3A-202ENST00000360093 CCINQ13939 588 aa4.65□□□□□ -1.67
SCN3A-202ENST00000360093 SEC23BQ15437 767 aa4.65□□□□□ -1.67
SCN3A-202ENST00000360093 RABL3Q5HYI8 236 aa4.65□□□□□ -1.67
SCN3A-202ENST00000360093 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.65□□□□□ -1.67
SCN3A-202ENST00000360093 IGSF5Q9NSI5 407 aa4.65□□□□□ -1.67
SCN3A-202ENST00000360093 SH3D21A4FU49 640 aa4.65□□□□□ -1.67
SCN3A-202ENST00000360093 VSTM2BA6NLU5 285 aa4.65□□□□□ -1.67
SCN3A-202ENST00000360093 BRINP1O60477 761 aa4.65□□□□□ -1.67
SCN3A-202ENST00000360093 CD6P30203 668 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms