RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 ZNF717Q9BY31 904 aaPredicted RBP8.17□□□□□ -1.1
RFX3-202ENST00000358730 UCK2Q9BZX2 261 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 SEMA3GQ9NS98 782 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 CUEDC1Q9NWM3 386 aaPredicted RBP8.17□□□□□ -1.1
RFX3-202ENST00000358730 DNAJC27Q9NZQ0 273 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 TMEM98Q9Y2Y6 226 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 CAB39Q9Y376 341 aaPredicted RBP8.17□□□□□ -1.1
RFX3-202ENST00000358730 UGT2A1Q9Y4X1 527 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 CKAP5Q14008 2032 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 DSPPQ9NZW4 1301 aa8.17□□□□□ -1.1
RFX3-202ENST00000358730 ENTPD6O75354 484 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 SEMA3DO95025 777 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 MFN2O95140 757 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 TBX6O95947 436 aaPredicted RBP8.16□□□□□ -1.1
RFX3-202ENST00000358730 PTTG1O95997 202 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 IGFBP1P08833 259 aaPredicted RBP8.16□□□□□ -1.1
RFX3-202ENST00000358730 OSMP13725 252 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 DOC2BQ14184 412 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 HEPACAMQ14CZ8 416 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 DCST1Q5T197 706 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.16□□□□□ -1.1
RFX3-202ENST00000358730 ATCAYQ86WG3 371 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 CACTIN-AS1Q8N1I8 211 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 ANKRD53Q8N9V6 530 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 PPP1R16AQ96I34 528 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 LRRC3BQ96PB8 259 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 AIF1LQ9BQI0 150 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 NUAK2Q9H093 628 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 TMEM165Q9HC07 324 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 EXOSC4Q9NPD3 245 aaKnown RBP8.16□□□□□ -1.1
RFX3-202ENST00000358730 QPCTLQ9NXS2 382 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 GPR34Q9UPC5 381 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 TSC22D4Q9Y3Q8 395 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 GOLGA4Q13439 2230 aaKnown RBP8.16□□□□□ -1.1
RFX3-202ENST00000358730 FEZF1A0PJY2 475 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 PRRT4C9JH25 899 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 ANHXE9PGG2 379 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 HAT1O14929 419 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 CAPN5O15484 640 aaPredicted RBP8.16□□□□□ -1.1
RFX3-202ENST00000358730 SEMA7AO75326 666 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 PDE9AO76083 593 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 KCNK2O95069 426 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 H1F0P07305 194 aaKnown RBP8.16□□□□□ -1.1
RFX3-202ENST00000358730 PSMB5P28074 263 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 SOX3P41225 446 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 VASPP50552 380 aaPredicted RBP8.16□□□□□ -1.1
RFX3-202ENST00000358730 CNTN1Q12860 1018 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 SSX1Q16384 188 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 TCTN3Q6NUS6 607 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 FAM92BQ6ZTR7 304 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 C11orf96Q7Z7L8 435 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 RBM45Q8IUH3 476 aaKnown RBP8.16□□□□□ -1.1
RFX3-202ENST00000358730 MRPL43Q8N983 215 aaKnown RBP8.16□□□□□ -1.1
RFX3-202ENST00000358730 SMPDL3AQ92484 453 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 TFGQ92734 400 aaPredicted RBP8.16□□□□□ -1.1
RFX3-202ENST00000358730 TM4SF18Q96CE8 201 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 CEP19Q96LK0 163 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 OPALINQ96PE5 141 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 KCNS3Q9BQ31 491 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 MS4A8Q9BY19 250 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 WDR37Q9Y2I8 494 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 PCDHGB6Q9Y5F9 930 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 HEATR5BQ9P2D3 2071 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 PNMA8CA0A1B0GUJ8 204 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 SNPHO15079 494 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 VEGFDO43915 354 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 ADH1CP00326 375 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 PIPP12273 146 aaPredicted RBP8.16□□□□□ -1.1
RFX3-202ENST00000358730 CKMT1AP12532 417 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 SPNP16150 400 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 EPCAMP16422 314 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 BSGP35613 385 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 OPRD1P41143 372 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 SLC15A1P46059 708 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 XKP51811 444 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 DPTQ07507 201 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 TOR1AIP1Q5JTV8 583 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 DESI1Q6ICB0 168 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 CASP12Q6UXS9 341 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 C6orf120Q7Z4R8 191 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 AKAP14Q86UN6 197 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 AMZ2Q86W34 360 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 SLC34A3Q8N130 599 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 TAPBPLQ9BX59 468 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 RSPO3Q9BXY4 272 aaPredicted RBP8.16□□□□□ -1.1
RFX3-202ENST00000358730 DYRK4Q9NR20 520 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 SIRT3Q9NTG7 399 aaPredicted RBP8.16□□□□□ -1.1
RFX3-202ENST00000358730 REV1Q9UBZ9 1251 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 SEC14L3Q9UDX4 400 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 MGAT4BQ9UQ53 548 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 SNX11Q9Y5W9 270 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 IRAK3Q9Y616 596 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 GPC6Q9Y625 555 aaPredicted RBP8.16□□□□□ -1.1
RFX3-202ENST00000358730 CHD7Q9P2D1 2997 aa8.16□□□□□ -1.1
RFX3-202ENST00000358730 C5orf42Q9H799 3197 aa8.15□□□□□ -1.1
RFX3-202ENST00000358730 HMGN4O00479 90 aa8.15□□□□□ -1.1
RFX3-202ENST00000358730 FAAHO00519 579 aa8.15□□□□□ -1.1
RFX3-202ENST00000358730 SLC28A2O43868 658 aa8.15□□□□□ -1.1
RFX3-202ENST00000358730 B4GALT2O60909 372 aa8.15□□□□□ -1.1
RFX3-202ENST00000358730 GPX5O75715 221 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms