RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 IFI44LQ53G44 452 aa13.59□□□□□ -0.23
NIPAL3-203ENST00000358028 UBE2UQ5VVX9 321 aa13.59□□□□□ -0.23
NIPAL3-203ENST00000358028 TRIM40Q6P9F5 258 aa13.59□□□□□ -0.23
NIPAL3-203ENST00000358028 NFKBIDQ8NI38 313 aa13.59□□□□□ -0.23
NIPAL3-203ENST00000358028 ZNF300Q96RE9 604 aaPredicted RBP13.59□□□□□ -0.23
NIPAL3-203ENST00000358028 AIF1LQ9BQI0 150 aa13.59□□□□□ -0.23
NIPAL3-203ENST00000358028 TEX101Q9BY14 249 aa13.59□□□□□ -0.23
NIPAL3-203ENST00000358028 RSPH9Q9H1X1 276 aaPredicted RBP13.59□□□□□ -0.23
NIPAL3-203ENST00000358028 CD93Q9NPY3 652 aa13.59□□□□□ -0.23
NIPAL3-203ENST00000358028 WASH6PQ9NQA3 447 aa13.59□□□□□ -0.23
NIPAL3-203ENST00000358028 TAS2R9Q9NYW1 312 aa13.59□□□□□ -0.23
NIPAL3-203ENST00000358028 CFAP20Q9Y6A4 193 aaKnown RBP13.59□□□□□ -0.23
NIPAL3-203ENST00000358028 TNRC6BQ9UPQ9 1833 aaKnown RBP13.59□□□□□ -0.23
NIPAL3-203ENST00000358028 SDK1Q7Z5N4 2213 aa13.59□□□□□ -0.23
NIPAL3-203ENST00000358028 CCDC163A0A0D9SF12 145 aa13.58□□□□□ -0.23
NIPAL3-203ENST00000358028 ANKDD1BA6NHY2 528 aa13.58□□□□□ -0.23
NIPAL3-203ENST00000358028 CLDN24A6NM45 220 aa13.58□□□□□ -0.23
NIPAL3-203ENST00000358028 TNFRSF11BO00300 401 aa13.58□□□□□ -0.23
NIPAL3-203ENST00000358028 SEMA3DO95025 777 aa13.58□□□□□ -0.23
NIPAL3-203ENST00000358028 CXCR2P25025 360 aa13.58□□□□□ -0.23
NIPAL3-203ENST00000358028 SOAT1P35610 550 aa13.58□□□□□ -0.23
NIPAL3-203ENST00000358028 KRT20P35900 424 aa13.58□□□□□ -0.23
NIPAL3-203ENST00000358028 CHI3L1P36222 383 aaPredicted RBP13.58□□□□□ -0.23
NIPAL3-203ENST00000358028 GGT2P36268 569 aa13.58□□□□□ -0.23
NIPAL3-203ENST00000358028 OPRL1P41146 370 aa13.58□□□□□ -0.23
NIPAL3-203ENST00000358028 MASP1P48740 699 aa13.58□□□□□ -0.23
NIPAL3-203ENST00000358028 MLLT10P55197 1068 aa13.58□□□□□ -0.23
NIPAL3-203ENST00000358028 CASP9P55211 416 aa13.58□□□□□ -0.23
NIPAL3-203ENST00000358028 REEP5Q00765 189 aa13.58□□□□□ -0.23
NIPAL3-203ENST00000358028 AGERQ15109 404 aa13.58□□□□□ -0.23
NIPAL3-203ENST00000358028 ZNF630Q2M218 657 aaPredicted RBP13.58□□□□□ -0.23
NIPAL3-203ENST00000358028 KHDRBS2Q5VWX1 349 aaKnown RBP13.58□□□□□ -0.23
NIPAL3-203ENST00000358028 LAIR1Q6GTX8 287 aa13.58□□□□□ -0.23
NIPAL3-203ENST00000358028 ZC3H14Q6PJT7 736 aaKnown RBP13.58□□□□□ -0.23
NIPAL3-203ENST00000358028 SLCO6A1Q86UG4 719 aa13.58□□□□□ -0.23
NIPAL3-203ENST00000358028 FAM124AQ86V42 546 aa13.58□□□□□ -0.23
NIPAL3-203ENST00000358028 CENPSQ8N2Z9 138 aa13.58□□□□□ -0.23
NIPAL3-203ENST00000358028 MINDY2Q8NBR6 621 aa13.58□□□□□ -0.23
NIPAL3-203ENST00000358028 PHF10Q8WUB8 498 aaKnown RBP13.58□□□□□ -0.23
NIPAL3-203ENST00000358028 SMPDL3AQ92484 453 aa13.58□□□□□ -0.23
NIPAL3-203ENST00000358028 MRGPRX1Q96LB2 322 aa13.58□□□□□ -0.23
NIPAL3-203ENST00000358028 NRTNQ99748 197 aa13.58□□□□□ -0.23
NIPAL3-203ENST00000358028 PSD2Q9BQI7 771 aa13.58□□□□□ -0.23
NIPAL3-203ENST00000358028 MENTQ9BUN1 341 aa13.58□□□□□ -0.23
NIPAL3-203ENST00000358028 MS4A8Q9BY19 250 aa13.58□□□□□ -0.23
NIPAL3-203ENST00000358028 PCBD2Q9H0N5 130 aa13.58□□□□□ -0.23
NIPAL3-203ENST00000358028 AKIP1Q9NQ31 210 aa13.58□□□□□ -0.23
NIPAL3-203ENST00000358028 MIEF1Q9NQG6 463 aa13.58□□□□□ -0.23
NIPAL3-203ENST00000358028 MBNL1Q9NR56 388 aaKnown RBP13.58□□□□□ -0.23
NIPAL3-203ENST00000358028 FBXO8Q9NRD0 319 aa13.58□□□□□ -0.23
NIPAL3-203ENST00000358028 C1GALT1Q9NS00 363 aa13.58□□□□□ -0.23
NIPAL3-203ENST00000358028 CUEDC1Q9NWM3 386 aaPredicted RBP13.58□□□□□ -0.23
NIPAL3-203ENST00000358028 NDUFAF4Q9P032 175 aa13.58□□□□□ -0.23
NIPAL3-203ENST00000358028 TAAR2Q9P1P5 351 aa13.58□□□□□ -0.23
NIPAL3-203ENST00000358028 ENOPH1Q9UHY7 261 aa13.58□□□□□ -0.23
NIPAL3-203ENST00000358028 POFUT2Q9Y2G5 429 aa13.58□□□□□ -0.23
NIPAL3-203ENST00000358028 LYVE1Q9Y5Y7 322 aa13.58□□□□□ -0.23
NIPAL3-203ENST00000358028 KPNA4O00629 521 aaPredicted RBP13.58□□□□□ -0.24
NIPAL3-203ENST00000358028 PLPP1O14494 284 aa13.58□□□□□ -0.24
NIPAL3-203ENST00000358028 HRO43593 1189 aa13.58□□□□□ -0.24
NIPAL3-203ENST00000358028 WBP4O75554 376 aaKnown RBP13.58□□□□□ -0.24
NIPAL3-203ENST00000358028 KRT75O95678 551 aa13.58□□□□□ -0.24
NIPAL3-203ENST00000358028 TBX6O95947 436 aaPredicted RBP13.58□□□□□ -0.24
NIPAL3-203ENST00000358028 ADH1BP00325 375 aa13.58□□□□□ -0.24
NIPAL3-203ENST00000358028 OPN1SWP03999 348 aa13.58□□□□□ -0.24
NIPAL3-203ENST00000358028 SLC35G4P0C7Q5 338 aa13.58□□□□□ -0.24
NIPAL3-203ENST00000358028 TEAD1P28347 426 aa13.58□□□□□ -0.24
NIPAL3-203ENST00000358028 SERPINB1P30740 379 aa13.58□□□□□ -0.24
NIPAL3-203ENST00000358028 RRM2P31350 389 aa13.58□□□□□ -0.24
NIPAL3-203ENST00000358028 MAP2K4P45985 399 aa13.58□□□□□ -0.24
NIPAL3-203ENST00000358028 PRIM2P49643 509 aa13.58□□□□□ -0.24
NIPAL3-203ENST00000358028 CCR8P51685 355 aa13.58□□□□□ -0.24
NIPAL3-203ENST00000358028 CYP4F2P78329 520 aa13.58□□□□□ -0.24
NIPAL3-203ENST00000358028 IRF4Q15306 451 aa13.58□□□□□ -0.24
NIPAL3-203ENST00000358028 DEPDC1Q5TB30 811 aa13.58□□□□□ -0.24
NIPAL3-203ENST00000358028 NIPAL1Q6NVV3 410 aa13.58□□□□□ -0.24
NIPAL3-203ENST00000358028 TSEN54Q7Z6J9 526 aaKnown RBP13.58□□□□□ -0.24
NIPAL3-203ENST00000358028 IGFN1Q86VF2 1251 aa13.58□□□□□ -0.24
NIPAL3-203ENST00000358028 RNF130Q86XS8 419 aa13.58□□□□□ -0.24
NIPAL3-203ENST00000358028 CCDC71Q8IV32 467 aaPredicted RBP13.58□□□□□ -0.24
NIPAL3-203ENST00000358028 MMP21Q8N119 569 aa13.58□□□□□ -0.24
NIPAL3-203ENST00000358028 HDDC3Q8N4P3 179 aa13.58□□□□□ -0.24
NIPAL3-203ENST00000358028 TMCO5AQ8N6Q1 288 aa13.58□□□□□ -0.24
NIPAL3-203ENST00000358028 OR4C15Q8NGM1 316 aa13.58□□□□□ -0.24
NIPAL3-203ENST00000358028 OR5AK3PQ8NH89 298 aa13.58□□□□□ -0.24
NIPAL3-203ENST00000358028 SPPL2AQ8TCT8 520 aa13.58□□□□□ -0.24
NIPAL3-203ENST00000358028 RLN3Q8WXF3 142 aa13.58□□□□□ -0.24
NIPAL3-203ENST00000358028 MYDGFQ969H8 173 aa13.58□□□□□ -0.24
NIPAL3-203ENST00000358028 TAMM41Q96BW9 452 aa13.58□□□□□ -0.24
NIPAL3-203ENST00000358028 MYOCQ99972 504 aa13.58□□□□□ -0.24
NIPAL3-203ENST00000358028 SLC6A16Q9GZN6 736 aa13.58□□□□□ -0.24
NIPAL3-203ENST00000358028 MAP4K5Q9Y4K4 846 aa13.58□□□□□ -0.24
NIPAL3-203ENST00000358028 PCDHGA6Q9Y5G7 932 aa13.58□□□□□ -0.24
NIPAL3-203ENST00000358028 CORINQ9Y5Q5 1042 aa13.58□□□□□ -0.24
NIPAL3-203ENST00000358028 DGKBQ9Y6T7 804 aa13.58□□□□□ -0.24
NIPAL3-203ENST00000358028 RALGAPA1Q6GYQ0 2036 aa13.57□□□□□ -0.24
NIPAL3-203ENST00000358028 OR2A25A4D2G3 310 aa13.57□□□□□ -0.24
NIPAL3-203ENST00000358028 GPR89AB7ZAQ6 455 aa13.57□□□□□ -0.24
NIPAL3-203ENST00000358028 J3QRK9 145 aa13.57□□□□□ -0.24
NIPAL3-203ENST00000358028 PCDHGA12O60330 932 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms