RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 CUTCQ9NTM9 273 aa17.12■□□□□ 0.33
SMARCD3-202ENST00000356800 SIDT1Q9NXL6 827 aaKnown RBP17.12■□□□□ 0.33
SMARCD3-202ENST00000356800 ACTR3BQ9P1U1 418 aa17.12■□□□□ 0.33
SMARCD3-202ENST00000356800 NKX1-2Q9UD57 310 aaPredicted RBP17.12■□□□□ 0.33
SMARCD3-202ENST00000356800 TMEM184BQ9Y519 407 aaPredicted RBP17.12■□□□□ 0.33
SMARCD3-202ENST00000356800 FAM227AF5H4B4 570 aa17.11■□□□□ 0.33
SMARCD3-202ENST00000356800 CHST10O43529 356 aa17.11■□□□□ 0.33
SMARCD3-202ENST00000356800 HYAL3O43820 417 aaPredicted RBP17.11■□□□□ 0.33
SMARCD3-202ENST00000356800 BUD31P41223 144 aaPredicted RBP17.11■□□□□ 0.33
SMARCD3-202ENST00000356800 AP2B1P63010 937 aa17.11■□□□□ 0.33
SMARCD3-202ENST00000356800 SIM1P81133 766 aaPredicted RBP17.11■□□□□ 0.33
SMARCD3-202ENST00000356800 SHC2P98077 582 aa17.11■□□□□ 0.33
SMARCD3-202ENST00000356800 DUSP2Q05923 314 aa17.11■□□□□ 0.33
SMARCD3-202ENST00000356800 ZNF750Q32MQ0 723 aa17.11■□□□□ 0.33
SMARCD3-202ENST00000356800 ZNF621Q6ZSS3 439 aa17.11■□□□□ 0.33
SMARCD3-202ENST00000356800 ZNF551Q7Z340 670 aaPredicted RBP17.11■□□□□ 0.33
SMARCD3-202ENST00000356800 PACS2Q86VP3 889 aa17.11■□□□□ 0.33
SMARCD3-202ENST00000356800 DHFR2Q86XF0 187 aa17.11■□□□□ 0.33
SMARCD3-202ENST00000356800 CLEC4FQ8N1N0 589 aa17.11■□□□□ 0.33
SMARCD3-202ENST00000356800 METTL27Q8N6F8 245 aaPredicted RBP17.11■□□□□ 0.33
SMARCD3-202ENST00000356800 TTC29Q8NA56 475 aaPredicted RBP17.11■□□□□ 0.33
SMARCD3-202ENST00000356800 HIPK4Q8NE63 616 aa17.11■□□□□ 0.33
SMARCD3-202ENST00000356800 ECSITQ9BQ95 431 aa17.11■□□□□ 0.33
SMARCD3-202ENST00000356800 KAT8Q9H7Z6 458 aaKnown RBP17.11■□□□□ 0.33
SMARCD3-202ENST00000356800 S100A14Q9HCY8 104 aa17.11■□□□□ 0.33
SMARCD3-202ENST00000356800 MS4A12Q9NXJ0 267 aa17.11■□□□□ 0.33
SMARCD3-202ENST00000356800 SERTAD3Q9UJW9 196 aa17.11■□□□□ 0.33
SMARCD3-202ENST00000356800 SEC16AO15027 2179 aa17.11■□□□□ 0.33
SMARCD3-202ENST00000356800 H0Y3Z8 333 aa17.1■□□□□ 0.33
SMARCD3-202ENST00000356800 ZNF749O43361 778 aa17.1■□□□□ 0.33
SMARCD3-202ENST00000356800 ERAL1O75616 437 aaKnown RBP17.1■□□□□ 0.33
SMARCD3-202ENST00000356800 STAMBPO95630 424 aa17.1■□□□□ 0.33
SMARCD3-202ENST00000356800 ABCB1P08183 1280 aaPredicted RBP17.1■□□□□ 0.33
SMARCD3-202ENST00000356800 RAB38P57729 211 aa17.1■□□□□ 0.33
SMARCD3-202ENST00000356800 KIF26BQ2KJY2 2108 aa17.1■□□□□ 0.33
SMARCD3-202ENST00000356800 AASDHQ4L235 1098 aaPredicted RBP17.1■□□□□ 0.33
SMARCD3-202ENST00000356800 C10orf111Q8N326 155 aa17.1■□□□□ 0.33
SMARCD3-202ENST00000356800 ZNF681Q96N22 645 aa17.1■□□□□ 0.33
SMARCD3-202ENST00000356800 ZNF583Q96ND8 569 aa17.1■□□□□ 0.33
SMARCD3-202ENST00000356800 RPF2Q9H7B2 306 aaKnown RBP17.1■□□□□ 0.33
SMARCD3-202ENST00000356800 TAS2R9Q9NYW1 312 aa17.1■□□□□ 0.33
SMARCD3-202ENST00000356800 HCN3Q9P1Z3 774 aa17.1■□□□□ 0.33
SMARCD3-202ENST00000356800 USP22Q9UPT9 525 aa17.1■□□□□ 0.33
SMARCD3-202ENST00000356800 PCDHB3Q9Y5E6 796 aa17.1■□□□□ 0.33
SMARCD3-202ENST00000356800 EP300Q09472 2414 aaPredicted RBP17.1■□□□□ 0.33
SMARCD3-202ENST00000356800 MYO1GB0I1T2 1018 aa17.1■□□□□ 0.33
SMARCD3-202ENST00000356800 C8BP07358 591 aa17.1■□□□□ 0.33
SMARCD3-202ENST00000356800 C8orf89P0DMQ9 161 aa17.1■□□□□ 0.33
SMARCD3-202ENST00000356800 ERFP50548 548 aa17.1■□□□□ 0.33
SMARCD3-202ENST00000356800 MAT1AQ00266 395 aaKnown RBP17.1■□□□□ 0.33
SMARCD3-202ENST00000356800 ACY1Q03154 408 aa17.1■□□□□ 0.33
SMARCD3-202ENST00000356800 C16orf72Q14CZ0 275 aa17.1■□□□□ 0.33
SMARCD3-202ENST00000356800 SYT16Q17RD7 645 aa17.1■□□□□ 0.33
SMARCD3-202ENST00000356800 FAM214AQ32MH5 1076 aa17.1■□□□□ 0.33
SMARCD3-202ENST00000356800 OR52E8Q6IFG1 317 aa17.1■□□□□ 0.33
SMARCD3-202ENST00000356800 LCN8Q6JVE9 175 aa17.1■□□□□ 0.33
SMARCD3-202ENST00000356800 ZFP1Q6P2D0 407 aa17.1■□□□□ 0.33
SMARCD3-202ENST00000356800 TLDC1Q6P9B6 456 aa17.1■□□□□ 0.33
SMARCD3-202ENST00000356800 TTLL10Q6ZVT0 673 aa17.1■□□□□ 0.33
SMARCD3-202ENST00000356800 GPR155Q7Z3F1 870 aa17.1■□□□□ 0.33
SMARCD3-202ENST00000356800 GPR135Q8IZ08 494 aa17.1■□□□□ 0.33
SMARCD3-202ENST00000356800 SUN3Q8TAQ9 357 aa17.1■□□□□ 0.33
SMARCD3-202ENST00000356800 OR5P2Q8WZ92 322 aa17.1■□□□□ 0.33
SMARCD3-202ENST00000356800 MMABQ96EY8 250 aaPredicted RBP17.1■□□□□ 0.33
SMARCD3-202ENST00000356800 AMDHD1Q96NU7 426 aa17.1■□□□□ 0.33
SMARCD3-202ENST00000356800 OR6C1Q96RD1 312 aa17.1■□□□□ 0.33
SMARCD3-202ENST00000356800 TRIM15Q9C019 465 aa17.1■□□□□ 0.33
SMARCD3-202ENST00000356800 IRF2BPLQ9H1B7 796 aa17.1■□□□□ 0.33
SMARCD3-202ENST00000356800 GLIPR2Q9H4G4 154 aa17.1■□□□□ 0.33
SMARCD3-202ENST00000356800 CXorf36Q9H7Y0 433 aa17.1■□□□□ 0.33
SMARCD3-202ENST00000356800 FANCEQ9HB96 536 aa17.1■□□□□ 0.33
SMARCD3-202ENST00000356800 PRDM9Q9NQV7 894 aa17.1■□□□□ 0.33
SMARCD3-202ENST00000356800 ACSS1Q9NUB1 689 aaPredicted RBP17.1■□□□□ 0.33
SMARCD3-202ENST00000356800 DHCR7Q9UBM7 475 aaKnown RBP17.1■□□□□ 0.33
SMARCD3-202ENST00000356800 ZNF282Q9UDV7 671 aaPredicted RBP17.1■□□□□ 0.33
SMARCD3-202ENST00000356800 VPS4AQ9UN37 437 aa17.1■□□□□ 0.33
SMARCD3-202ENST00000356800 SNX13Q9Y5W8 968 aa17.1■□□□□ 0.33
SMARCD3-202ENST00000356800 NVLO15381 856 aaKnown RBP17.09■□□□□ 0.33
SMARCD3-202ENST00000356800 TLX1P31314 330 aaPredicted RBP17.09■□□□□ 0.33
SMARCD3-202ENST00000356800 FEN1P39748 380 aaKnown RBP17.09■□□□□ 0.33
SMARCD3-202ENST00000356800 MANFP55145 182 aaKnown RBP17.09■□□□□ 0.33
SMARCD3-202ENST00000356800 SKP1P63208 163 aa17.09■□□□□ 0.33
SMARCD3-202ENST00000356800 TRA2AQ13595 282 aaKnown RBP eCLIP17.09■□□□□ 0.33
SMARCD3-202ENST00000356800 CEBPEQ15744 281 aa17.09■□□□□ 0.33
SMARCD3-202ENST00000356800 NIPAL1Q6NVV3 410 aa17.09■□□□□ 0.33
SMARCD3-202ENST00000356800 IFNEQ86WN2 208 aa17.09■□□□□ 0.33
SMARCD3-202ENST00000356800 CALHM3Q86XJ0 350 aa17.09■□□□□ 0.33
SMARCD3-202ENST00000356800 GOLM1Q8NBJ4 401 aa17.09■□□□□ 0.33
SMARCD3-202ENST00000356800 TNIP2Q8NFZ5 429 aa17.09■□□□□ 0.33
SMARCD3-202ENST00000356800 OR10A6Q8NH74 314 aa17.09■□□□□ 0.33
SMARCD3-202ENST00000356800 ZFP90Q8TF47 636 aa17.09■□□□□ 0.33
SMARCD3-202ENST00000356800 PYDC1Q8WXC3 89 aa17.09■□□□□ 0.33
SMARCD3-202ENST00000356800 ZBED6CLQ96FA7 236 aaPredicted RBP17.09■□□□□ 0.33
SMARCD3-202ENST00000356800 PIF1Q9H611 641 aa17.09■□□□□ 0.33
SMARCD3-202ENST00000356800 SIRT3Q9NTG7 399 aaPredicted RBP17.09■□□□□ 0.33
SMARCD3-202ENST00000356800 OCIAD1Q9NX40 245 aa17.09■□□□□ 0.33
SMARCD3-202ENST00000356800 PCDHGB4Q9UN71 923 aa17.09■□□□□ 0.33
SMARCD3-202ENST00000356800 PCNX2A6NKB5 2137 aa17.09■□□□□ 0.33
SMARCD3-202ENST00000356800 TCRBV3S1A0A5B6 114 aa17.08■□□□□ 0.32
SMARCD3-202ENST00000356800 EVPLLA8MZ36 301 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms