RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 EXOC7Q9UPT5 735 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 NAALAD2Q9Y3Q0 740 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 A0A1W2PQF6 199 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 ALOX12BO75342 701 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 ADH1AP07327 375 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 CISD3P0C7P0 127 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 MBL2P11226 248 aaPredicted RBP5.3□□□□□ -1.56
CD47-201ENST00000355354 BTCP35070 178 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 SPRP35270 261 aaPredicted RBP5.3□□□□□ -1.56
CD47-201ENST00000355354 IDH2P48735 452 aaKnown RBP5.3□□□□□ -1.56
CD47-201ENST00000355354 LMAN2Q12907 356 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 GLB1LQ6UWU2 654 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 SIX6OS1Q8N1H7 587 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 GPR151Q8TDV0 419 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 KCTD13Q8WZ19 329 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 DCBLD2Q96PD2 775 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 TRMT61BQ9BVS5 477 aaKnown RBP5.3□□□□□ -1.56
CD47-201ENST00000355354 DDX56Q9NY93 547 aaKnown RBP5.3□□□□□ -1.56
CD47-201ENST00000355354 PTTG2Q9NZH5 202 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 CNIH4Q9P003 139 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 TXNDC16Q9P2K2 825 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 LIPT1Q9Y234 373 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 SIT1Q9Y3P8 196 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 IKBKGQ9Y6K9 419 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 POM121BA6NF01 834 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 SUV39H1O43463 412 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 ENTPD6O75354 484 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 FAM58BPP0C7Q3 252 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 HTR7P34969 479 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 EIF2DP41214 584 aaKnown RBP5.3□□□□□ -1.56
CD47-201ENST00000355354 NPTX1Q15818 432 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 EOGTQ5NDL2 527 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 AP1ARQ63HQ0 302 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 LCN8Q6JVE9 175 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 TNFAIP8L2Q6P589 184 aaPredicted RBP5.3□□□□□ -1.56
CD47-201ENST00000355354 TMEM64Q6YI46 380 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 SERPINA9Q86WD7 417 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 CYB561A3Q8NBI2 242 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 IL17RDQ8NFM7 739 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 OR4F15Q8NGB8 312 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 OR6T1Q8NGN1 323 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 COPS8Q99627 209 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 GFI1Q99684 422 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 CHCHD6Q9BRQ6 235 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 JAM3Q9BX67 310 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 ADNPQ9H2P0 1102 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 MBNL1Q9NR56 388 aaKnown RBP5.3□□□□□ -1.56
CD47-201ENST00000355354 ZNF860A6NHJ4 632 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 FAM171A2A8MVW0 826 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 CLGNO14967 610 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 SEMG1P04279 462 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 DBTP11182 482 aaKnown RBP5.3□□□□□ -1.56
CD47-201ENST00000355354 ENDOUP21128 410 aaKnown RBP5.3□□□□□ -1.56
CD47-201ENST00000355354 PAX3P23760 479 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 MST1P26927 711 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 CNR2P34972 360 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 BCAP31P51572 246 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 ZNF135P52742 658 aaPredicted RBP5.3□□□□□ -1.56
CD47-201ENST00000355354 TGIF1Q15583 401 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 KIF19Q2TAC6 998 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 MFSD4BQ5TF39 518 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 KIAA0930Q6ICG6 404 aaPredicted RBP5.3□□□□□ -1.56
CD47-201ENST00000355354 ERAP2Q6P179 960 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 APOOLQ6UXV4 268 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 B3GNT6Q6ZMB0 384 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 MTSS1LQ765P7 747 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 BEND5Q7L4P6 421 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 DHFR2Q86XF0 187 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 PTRH1Q86Y79 214 aaKnown RBP5.3□□□□□ -1.56
CD47-201ENST00000355354 NKAIN4Q8IVV8 208 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 OR4L1Q8NH43 312 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 RP9Q8TA86 221 aaKnown RBP5.3□□□□□ -1.56
CD47-201ENST00000355354 ZNF480Q8WV37 535 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 KIAA1191Q96A73 305 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 CCDC126Q96EE4 140 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 NR1H4Q96RI1 486 aaPredicted RBP5.3□□□□□ -1.56
CD47-201ENST00000355354 CPPED1Q9BRF8 314 aaPredicted RBP5.3□□□□□ -1.56
CD47-201ENST00000355354 FAIM2Q9BWQ8 316 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 TMEM168Q9H0V1 697 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 SLC25A51Q9H1U9 297 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 CYP3A43Q9HB55 503 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 ARMC1Q9NVT9 282 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 SENP1Q9P0U3 644 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 B4GALT6Q9UBX8 382 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 FLVCR2Q9UPI3 526 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 SLC30A1Q9Y6M5 507 aa5.3□□□□□ -1.56
CD47-201ENST00000355354 ANK3Q12955 4377 aaKnown RBP5.3□□□□□ -1.56
CD47-201ENST00000355354 CYSRT1A8MQ03 144 aa5.29□□□□□ -1.56
CD47-201ENST00000355354 IFNL4K9M1U5 179 aa5.29□□□□□ -1.56
CD47-201ENST00000355354 PIP5K1CO60331 668 aa5.29□□□□□ -1.56
CD47-201ENST00000355354 PRAMEF11O60813 436 aa5.29□□□□□ -1.56
CD47-201ENST00000355354 MPC2O95563 127 aa5.29□□□□□ -1.56
CD47-201ENST00000355354 NPPBP16860 134 aa5.29□□□□□ -1.56
CD47-201ENST00000355354 ARL4AP40617 200 aa5.29□□□□□ -1.56
CD47-201ENST00000355354 PXNP49023 591 aaPredicted RBP5.29□□□□□ -1.56
CD47-201ENST00000355354 CLDN12P56749 244 aa5.29□□□□□ -1.56
CD47-201ENST00000355354 ABRQ12979 859 aa5.29□□□□□ -1.56
CD47-201ENST00000355354 PLD1Q13393 1074 aa5.29□□□□□ -1.56
CD47-201ENST00000355354 RNASE12Q5GAN4 147 aaKnown RBP5.29□□□□□ -1.56
CD47-201ENST00000355354 RNF219Q5W0B1 726 aaPredicted RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms